BLASTX nr result

ID: Coptis21_contig00029616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029616
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281630.1| PREDICTED: kinesin-like protein KIF11-like [...   124   1e-26
emb|CAN66120.1| hypothetical protein VITISV_002804 [Vitis vinifera]   124   1e-26
ref|XP_002312587.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23
ref|XP_002870320.1| hypothetical protein ARALYDRAFT_493473 [Arab...   102   5e-20
ref|XP_002315571.1| predicted protein [Populus trichocarpa] gi|2...   102   5e-20

>ref|XP_002281630.1| PREDICTED: kinesin-like protein KIF11-like [Vitis vinifera]
          Length = 929

 Score =  124 bits (310), Expect = 1e-26
 Identities = 74/166 (44%), Positives = 103/166 (62%), Gaps = 4/166 (2%)
 Frame = +1

Query: 4   ELEKKLQECQKMADEFVEMGKRRMXXXXXXXXXXXXXXXXXXXXXXTVLQQSRDKTGHDK 183
           ELEKKLQECQ MA+EFVE+G++RM                      + L  SR   G   
Sbjct: 479 ELEKKLQECQSMANEFVELGRKRMEEKILQQQQEVELLRYRLEEIESELFFSRSINGKVN 538

Query: 184 V-REVEGSGFAKRLLELYADADQGMEKSMDLDMGDPQPLVVHEVKQVDKGVSQ---HKTY 351
           V R++EG+GFAKRL+E+YAD D GM KSMDLDMGD +P  V +V+ +D+GV Q   +   
Sbjct: 539 VSRDLEGNGFAKRLVEIYADEDPGMVKSMDLDMGDQEP-YVRDVRHIDRGVHQLNNNVNQ 597

Query: 352 GSLDGLFHHLTDTEVEEDGDMIAPKFTEKVYLSTVFEEDEEGQDKD 489
           G L+ L  ++ + EV  D D+ A K+ ++V LSTVFE++E  +D++
Sbjct: 598 GFLNHLHQNILNEEV--DDDVFAAKYGDRVCLSTVFEDEEAEEDEE 641


>emb|CAN66120.1| hypothetical protein VITISV_002804 [Vitis vinifera]
          Length = 980

 Score =  124 bits (310), Expect = 1e-26
 Identities = 74/166 (44%), Positives = 103/166 (62%), Gaps = 4/166 (2%)
 Frame = +1

Query: 4   ELEKKLQECQKMADEFVEMGKRRMXXXXXXXXXXXXXXXXXXXXXXTVLQQSRDKTGHDK 183
           ELEKKLQECQ MA+EFVE+G++RM                      + L  SR   G   
Sbjct: 479 ELEKKLQECQSMANEFVELGRKRMEEKILQQQQEVELLRYRLEEIESELFFSRSINGKVN 538

Query: 184 V-REVEGSGFAKRLLELYADADQGMEKSMDLDMGDPQPLVVHEVKQVDKGVSQ---HKTY 351
           V R++EG+GFAKRL+E+YAD D GM KSMDLDMGD +P  V +V+ +D+GV Q   +   
Sbjct: 539 VSRDLEGNGFAKRLVEIYADEDPGMVKSMDLDMGDQEP-YVRDVRHIDRGVHQLNNNVNQ 597

Query: 352 GSLDGLFHHLTDTEVEEDGDMIAPKFTEKVYLSTVFEEDEEGQDKD 489
           G L+ L  ++ + EV  D D+ A K+ ++V LSTVFE++E  +D++
Sbjct: 598 GFLNHLHQNILNEEV--DDDVFAAKYGDRVCLSTVFEDEEAEEDEE 641


>ref|XP_002312587.1| predicted protein [Populus trichocarpa] gi|222852407|gb|EEE89954.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score =  113 bits (282), Expect = 2e-23
 Identities = 72/170 (42%), Positives = 98/170 (57%), Gaps = 3/170 (1%)
 Frame = +1

Query: 1   LELEKKLQECQKMADEFVEMGKRRMXXXXXXXXXXXXXXXXXXXXXXTVLQQSR-DKTGH 177
           L+LEKKL ECQ+MA+EFVE+ +RRM                        L  S+ + +G 
Sbjct: 478 LQLEKKLDECQRMAEEFVELERRRMEEKILQQQQEVEMLRRRLEEIEFELCHSKGENSGV 537

Query: 178 DKVREVEGSGFAKRLLELYADADQGMEKSMDLDMGDPQPLVVHEVKQVDKGVSQHKTYG- 354
           +  R+++GSGFA+RL+ +YAD D GM KSMDLDMGD Q + V +VK V     Q    G 
Sbjct: 538 NGPRDIDGSGFARRLMGVYADEDPGMVKSMDLDMGD-QDVFVRDVKLVGTSAHQSSNIGI 596

Query: 355 -SLDGLFHHLTDTEVEEDGDMIAPKFTEKVYLSTVFEEDEEGQDKDDAED 501
            SL G  H  T  +V + G + AP + +KV LSTVFEE+E  +++   ED
Sbjct: 597 QSLSGYPHLSTLNQVVDHG-VFAPTYGDKVCLSTVFEEEEVEEEEHKVED 645


>ref|XP_002870320.1| hypothetical protein ARALYDRAFT_493473 [Arabidopsis lyrata subsp.
           lyrata] gi|297316156|gb|EFH46579.1| hypothetical protein
           ARALYDRAFT_493473 [Arabidopsis lyrata subsp. lyrata]
          Length = 869

 Score =  102 bits (253), Expect = 5e-20
 Identities = 70/168 (41%), Positives = 93/168 (55%), Gaps = 2/168 (1%)
 Frame = +1

Query: 4   ELEKKLQECQKMADEFVEMGKRRMXXXXXXXXXXXXXXXXXXXXXXTVLQQSRDKTGHDK 183
           ELEKKL+EC++MA+EFVEM +RRM                         ++SRD    D 
Sbjct: 463 ELEKKLEECRRMAEEFVEMERRRMEERIVQQQEELEMMRRRLEEIEIEFRRSRDGGSID- 521

Query: 184 VREVEGSGFAKRLLELYADADQGMEKSMDLDMGDPQPLVVHEVKQVDKGVSQHKTYGSLD 363
               E SGFAKRL  LY+D D GM KSMDLDMGDP+P     VKQV   VSQ  +  ++ 
Sbjct: 522 ----ETSGFAKRLRSLYSDDDPGMVKSMDLDMGDPEP-----VKQVWGAVSQQSS-NTIS 571

Query: 364 GLFHHLTDTEVEEDGDMIAPKFTEKVYLSTVFEED--EEGQDKDDAED 501
             F ++   +  E  +M+   + ++V LSTVFEE+  EE ++K   ED
Sbjct: 572 SNFTNILQPKPSE--NMLTQMYPDRVCLSTVFEEEEVEEEEEKVIVED 617


>ref|XP_002315571.1| predicted protein [Populus trichocarpa] gi|222864611|gb|EEF01742.1|
           predicted protein [Populus trichocarpa]
          Length = 889

 Score =  102 bits (253), Expect = 5e-20
 Identities = 72/173 (41%), Positives = 92/173 (53%), Gaps = 6/173 (3%)
 Frame = +1

Query: 1   LELEKKLQECQKMADEFVEMGKRRMXXXXXXXXXXXXXXXXXXXXXXTVLQQSRDKTGHD 180
           L+LEKKL+ECQ+MA+EFVEM +RRM                        L +SRD+ G +
Sbjct: 478 LQLEKKLEECQRMAEEFVEMERRRMEEKILQQQQEVEMLRRRLEEIEFELCRSRDENGGE 537

Query: 181 K-VREVEGSGFAKRLLELYADADQGMEKSMDLDMGDPQPLVVHEVKQVDKGVSQHKTYG- 354
              R+++G  FA+RLL +YAD D GM KSMDLDMGD Q   V +V+ V     Q    G 
Sbjct: 538 NGPRDIDGCSFARRLLGVYADEDPGMVKSMDLDMGD-QEAFVRDVRFVGASAHQSSVIGT 596

Query: 355 -SLDGLFHHLTDTEVEEDGDMIAPKFTEKVYLSTVFEE---DEEGQDKDDAED 501
            SL    H  T  +V +  D        KV LSTVFEE   +EE + K+  ED
Sbjct: 597 QSLSSYPHFSTLNQVVDHED--------KVCLSTVFEEEEVEEEEEHKNKVED 641


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