BLASTX nr result

ID: Coptis21_contig00029595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029595
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529346.1| conserved hypothetical protein [Ricinus comm...   121   5e-26
ref|XP_002324957.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_003550834.1| PREDICTED: uncharacterized protein LOC100797...   110   1e-22
ref|XP_003525655.1| PREDICTED: uncharacterized protein LOC100807...   108   6e-22
ref|XP_003528276.1| PREDICTED: uncharacterized protein LOC100809...   107   1e-21

>ref|XP_002529346.1| conserved hypothetical protein [Ricinus communis]
           gi|223531166|gb|EEF33013.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 474

 Score =  121 bits (304), Expect = 5e-26
 Identities = 70/137 (51%), Positives = 85/137 (62%), Gaps = 3/137 (2%)
 Frame = +2

Query: 2   IPLKHXXXXXXXXXXXXXXXXXWMVSAQLWSQSDDVKKQPTTVTSPKETDQCF--SPKLC 175
           +PLK+                 WM +AQLWSQ  +  K  TT  SPKET+  F  SPKL 
Sbjct: 89  MPLKNSTSETLDKSSNMSDKANWMTTAQLWSQESNEIKPQTTFNSPKETNIGFNVSPKLG 148

Query: 176 LDDKKRNGGAFLPFSKERNTCASPALRVLPDLALASNDKE-HDSKKCIESDKGMSCSRRE 352
           LD K+RNGGAFLPFSKERN C SP       LALAS DKE  + KKC+E++ G+SCS+R+
Sbjct: 149 LDTKQRNGGAFLPFSKERNLCPSPT------LALASTDKELMEDKKCLETENGLSCSKRD 202

Query: 353 NSNKCGNGGTVTHEQGK 403
           NS+K  NGG +  E GK
Sbjct: 203 NSSKVSNGG-IMIEHGK 218


>ref|XP_002324957.1| predicted protein [Populus trichocarpa] gi|222866391|gb|EEF03522.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score =  120 bits (300), Expect = 1e-25
 Identities = 73/139 (52%), Positives = 83/139 (59%), Gaps = 5/139 (3%)
 Frame = +2

Query: 2   IPLKHXXXXXXXXXXXXXXXXXWMVSAQLWSQSDDVKKQPTTVTSPKETDQCF--SPKLC 175
           IPLK                  WM +AQLWSQ  +  K  TT+TSPK+TD  F  S KL 
Sbjct: 89  IPLKTPTSEALEKTTNISDKANWMTTAQLWSQDSNESKPQTTLTSPKQTDIGFNVSSKLA 148

Query: 176 LDDKKRNGGAFLPFSKERNTCASPALRVLPDLALASNDK--EHDSKKCIESDKGMSCSRR 349
           LD K+RNGGAFLPFSKERN C SP       LAL+S DK  E D KKC E++ G SC +R
Sbjct: 149 LDTKQRNGGAFLPFSKERNLCPSPT------LALSSTDKHMEFDHKKCSEAENGFSCPKR 202

Query: 350 ENS-NKCGNGGTVTHEQGK 403
           E+S NK GNGG V  EQ K
Sbjct: 203 ESSGNKIGNGGVVI-EQAK 220


>ref|XP_003550834.1| PREDICTED: uncharacterized protein LOC100797015 [Glycine max]
          Length = 452

 Score =  110 bits (275), Expect = 1e-22
 Identities = 67/118 (56%), Positives = 83/118 (70%), Gaps = 6/118 (5%)
 Frame = +2

Query: 68  WMVSAQLWSQSDDVKKQPTTVTSPKETDQCFS--PKLCLDDKKRNGG-AFLPFSKERNTC 238
           WM SAQLWSQ+ +  KQ  T+T+PKE+D  FS  PKL LD+K+RNGG AFLPFSKERN+C
Sbjct: 112 WMTSAQLWSQASEGTKQQPTITTPKESDIGFSISPKLALDNKQRNGGGAFLPFSKERNSC 171

Query: 239 ASPALRVLPDLALASNDKEHDSKKCIE--SDKGMSC-SRRENSNKCGNGGTVTHEQGK 403
               LR LP+LALA  +KE + KK       KG+SC S++ENS   G+ GTV  +QGK
Sbjct: 172 QGSTLRPLPELALAYAEKEMEDKKLRPEVEIKGVSCQSKKENS---GSDGTVV-DQGK 225


>ref|XP_003525655.1| PREDICTED: uncharacterized protein LOC100807925 [Glycine max]
          Length = 454

 Score =  108 bits (269), Expect = 6e-22
 Identities = 72/141 (51%), Positives = 89/141 (63%), Gaps = 7/141 (4%)
 Frame = +2

Query: 2   IPLKHXXXXXXXXXXXXXXXXXWMVSAQLWSQ--SDDVKKQPTTVTSPKETDQCFS--PK 169
           IP+KH                 WM SAQLWSQ  S+  K+QP  +T+ KE+D  FS  PK
Sbjct: 89  IPMKHLASESSEKATNMSDKANWMTSAQLWSQASSEGTKQQPP-ITTLKESDIGFSISPK 147

Query: 170 LCLDDKKRNGG-AFLPFSKERNTCASPALRVLPDLALASNDKEHDSKKCIESD-KGMSC- 340
           L LD+K+RNGG AFLPFSKERN+C    LR LP+L LAS +KE + KK  E + KG+SC 
Sbjct: 148 LALDNKQRNGGGAFLPFSKERNSCQGSTLRPLPELVLASAEKEMEDKKRAEVEIKGVSCQ 207

Query: 341 SRRENSNKCGNGGTVTHEQGK 403
           SR+ENS   G+ G V  +QGK
Sbjct: 208 SRKENS---GSDGAVV-DQGK 224


>ref|XP_003528276.1| PREDICTED: uncharacterized protein LOC100809196 [Glycine max]
          Length = 467

 Score =  107 bits (267), Expect = 1e-21
 Identities = 66/117 (56%), Positives = 81/117 (69%), Gaps = 5/117 (4%)
 Frame = +2

Query: 68  WMVSAQLWSQSDDVKKQPTTVTS-PKE-TDQCFS--PKLCLDDKKRNGGAFLPFSKERNT 235
           WM SAQLWSQ+ +  K  +T+TS PKE  D  FS  PKL LD+K RNGGAFLPFSKERN+
Sbjct: 116 WMTSAQLWSQASEGTKPQSTITSLPKEGADIGFSVSPKLALDNKHRNGGAFLPFSKERNS 175

Query: 236 CASPALRVLPDLALASNDKEHDSKKC-IESDKGMSCSRRENSNKCGNGGTVTHEQGK 403
           C    LR LP+LALAS +KE +  KC +E++K   CS+REN  K G+   V  +QGK
Sbjct: 176 C--QGLRGLPELALASPEKEIEENKCELEAEK---CSKRENPGKGGSCEGVNVDQGK 227


Top