BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029591
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL67432.1|AF458406_1 chlorophyll a/b binding protein [Brassi...   194   8e-48
sp|P13851.1|CB21_SINAL RecName: Full=Chlorophyll a-b binding pro...   194   8e-48
gb|AAA18529.1| chlorophyll A/B binding protein [Gossypium hirsutum]   193   1e-47
gb|ACO51067.1| chloroplast chlorophyll A-B binding protein [Goss...   193   1e-47
gb|AFW90565.1| chlorophyll a-b binding protein 3C-like mRNA [Sol...   192   2e-47

>gb|AAL67432.1|AF458406_1 chlorophyll a/b binding protein [Brassica oleracea]
          Length = 266

 Score =  194 bits (492), Expect = 8e-48
 Identities = 90/90 (100%), Positives = 90/90 (100%)
 Frame = +3

Query: 3   PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKF 182
           PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKF
Sbjct: 66  PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKF 125

Query: 183 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 272
           GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ
Sbjct: 126 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 155


>sp|P13851.1|CB21_SINAL RecName: Full=Chlorophyll a-b binding protein 1, chloroplastic;
           AltName: Full=LHCII type I CAB-1; Short=LHCP; Flags:
           Precursor gi|21138|emb|CAA34459.1| unnamed protein
           product [Sinapis alba] gi|21140|emb|CAA33903.1|
           chlorophyll a/b-binding polypeptide [Sinapis alba]
          Length = 266

 Score =  194 bits (492), Expect = 8e-48
 Identities = 90/90 (100%), Positives = 90/90 (100%)
 Frame = +3

Query: 3   PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKF 182
           PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKF
Sbjct: 66  PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKF 125

Query: 183 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 272
           GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ
Sbjct: 126 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 155


>gb|AAA18529.1| chlorophyll A/B binding protein [Gossypium hirsutum]
          Length = 264

 Score =  193 bits (491), Expect = 1e-47
 Identities = 89/90 (98%), Positives = 90/90 (100%)
 Frame = +3

Query: 3   PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKF 182
           PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKF
Sbjct: 65  PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKF 124

Query: 183 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 272
           GEAVWFKAGSQIFSEGGLDYLGNPSL+HAQ
Sbjct: 125 GEAVWFKAGSQIFSEGGLDYLGNPSLIHAQ 154


>gb|ACO51067.1| chloroplast chlorophyll A-B binding protein [Gossypium hirsutum]
          Length = 264

 Score =  193 bits (491), Expect = 1e-47
 Identities = 89/90 (98%), Positives = 90/90 (100%)
 Frame = +3

Query: 3   PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKF 182
           PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKF
Sbjct: 65  PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKF 124

Query: 183 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 272
           GEAVWFKAGSQIFSEGGLDYLGNPSL+HAQ
Sbjct: 125 GEAVWFKAGSQIFSEGGLDYLGNPSLIHAQ 154


>gb|AFW90565.1| chlorophyll a-b binding protein 3C-like mRNA [Solanum tuberosum]
          Length = 233

 Score =  192 bits (489), Expect = 2e-47
 Identities = 89/90 (98%), Positives = 90/90 (100%)
 Frame = +3

Query: 3   PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKF 182
           PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLARNGVKF
Sbjct: 34  PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 93

Query: 183 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 272
           GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ
Sbjct: 94  GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 123