BLASTX nr result

ID: Coptis21_contig00029582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029582
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265987.2| PREDICTED: uncharacterized protein LOC100241...    57   1e-06
emb|CAN81801.1| hypothetical protein VITISV_032489 [Vitis vinifera]    57   1e-06
ref|XP_002284339.2| PREDICTED: uncharacterized protein LOC100262...    55   8e-06
emb|CAN64949.1| hypothetical protein VITISV_036867 [Vitis vinifera]    55   8e-06

>ref|XP_002265987.2| PREDICTED: uncharacterized protein LOC100241871 [Vitis vinifera]
          Length = 665

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/55 (54%), Positives = 39/55 (70%)
 Frame = +1

Query: 49  MIGLDGLASSMAEVPALTGSNSTVHSSVQQNTPAKLSTVPPSSIGGLSMAETLAQ 213
           +IG DG  S++AEVP + GSN+T  SSVQQ+  A   +V PS+  GL+MAETL Q
Sbjct: 230 VIGGDGWTSALAEVPVIIGSNTTGVSSVQQSVSASSVSVAPSTTSGLNMAETLVQ 284


>emb|CAN81801.1| hypothetical protein VITISV_032489 [Vitis vinifera]
          Length = 749

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/55 (54%), Positives = 39/55 (70%)
 Frame = +1

Query: 49  MIGLDGLASSMAEVPALTGSNSTVHSSVQQNTPAKLSTVPPSSIGGLSMAETLAQ 213
           +IG DG  S++AEVP + GSN+T  SSVQQ+  A   +V PS+  GL+MAETL Q
Sbjct: 236 VIGGDGWTSALAEVPVIIGSNTTGVSSVQQSVSASSVSVAPSTTSGLNMAETLVQ 290


>ref|XP_002284339.2| PREDICTED: uncharacterized protein LOC100262519 [Vitis vinifera]
          Length = 709

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/55 (52%), Positives = 39/55 (70%)
 Frame = +1

Query: 49  MIGLDGLASSMAEVPALTGSNSTVHSSVQQNTPAKLSTVPPSSIGGLSMAETLAQ 213
           +IG +G  S++AEVP +TGSNST  SSVQQ   +  ++  PS+  GL+MAE LAQ
Sbjct: 224 LIGGEGWTSALAEVPMITGSNSTGSSSVQQTVVSAPASGLPSTTAGLNMAEALAQ 278


>emb|CAN64949.1| hypothetical protein VITISV_036867 [Vitis vinifera]
          Length = 588

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/55 (52%), Positives = 39/55 (70%)
 Frame = +1

Query: 49  MIGLDGLASSMAEVPALTGSNSTVHSSVQQNTPAKLSTVPPSSIGGLSMAETLAQ 213
           +IG +G  S++AEVP +TGSNST  SSVQQ   +  ++  PS+  GL+MAE LAQ
Sbjct: 148 LIGGEGWTSALAEVPMITGSNSTGSSSVQQTVVSAPASGLPSTTAGLNMAEALAQ 202


Top