BLASTX nr result
ID: Coptis21_contig00029568
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00029568 (255 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275124.1| PREDICTED: guanylate-binding protein 4-like ... 82 4e-14 emb|CAN71361.1| hypothetical protein VITISV_039421 [Vitis vinifera] 82 4e-14 emb|CBI17922.3| unnamed protein product [Vitis vinifera] 82 6e-14 ref|XP_002306811.1| predicted protein [Populus trichocarpa] gi|2... 64 2e-08 ref|XP_003536798.1| PREDICTED: guanylate-binding protein 4-like ... 60 2e-07 >ref|XP_002275124.1| PREDICTED: guanylate-binding protein 4-like [Vitis vinifera] Length = 674 Score = 82.4 bits (202), Expect = 4e-14 Identities = 40/55 (72%), Positives = 43/55 (78%) Frame = -1 Query: 165 RKRMELSTWGVLFWILFNLFQCGYSSIENFRQAFPIVEPDSGHTKLRLSREGLEA 1 R ME+S W + FWI LF G SSIENFRQAFPIVEPD GHTKLRL+REGLEA Sbjct: 70 RSVMEISYWVLAFWIFLCLFASGSSSIENFRQAFPIVEPDPGHTKLRLAREGLEA 124 >emb|CAN71361.1| hypothetical protein VITISV_039421 [Vitis vinifera] Length = 246 Score = 82.4 bits (202), Expect = 4e-14 Identities = 40/55 (72%), Positives = 43/55 (78%) Frame = -1 Query: 165 RKRMELSTWGVLFWILFNLFQCGYSSIENFRQAFPIVEPDSGHTKLRLSREGLEA 1 R ME+S W + FWI LF G SSIENFRQAFPIVEPD GHTKLRL+REGLEA Sbjct: 114 RSVMEISYWVLAFWIFLCLFASGSSSIENFRQAFPIVEPDPGHTKLRLAREGLEA 168 >emb|CBI17922.3| unnamed protein product [Vitis vinifera] Length = 602 Score = 81.6 bits (200), Expect = 6e-14 Identities = 39/52 (75%), Positives = 42/52 (80%) Frame = -1 Query: 156 MELSTWGVLFWILFNLFQCGYSSIENFRQAFPIVEPDSGHTKLRLSREGLEA 1 ME+S W + FWI LF G SSIENFRQAFPIVEPD GHTKLRL+REGLEA Sbjct: 1 MEISYWVLAFWIFLCLFASGSSSIENFRQAFPIVEPDPGHTKLRLAREGLEA 52 >ref|XP_002306811.1| predicted protein [Populus trichocarpa] gi|222856260|gb|EEE93807.1| predicted protein [Populus trichocarpa] Length = 663 Score = 63.5 bits (153), Expect = 2e-08 Identities = 27/52 (51%), Positives = 37/52 (71%) Frame = -1 Query: 156 MELSTWGVLFWILFNLFQCGYSSIENFRQAFPIVEPDSGHTKLRLSREGLEA 1 M++S W + +W+ +F G SI+NF +AFPI+EPD HTKL L+ EGLEA Sbjct: 1 MKISRWILFYWLFLCVFASGSLSIDNFNRAFPIIEPDPNHTKLHLASEGLEA 52 >ref|XP_003536798.1| PREDICTED: guanylate-binding protein 4-like [Glycine max] Length = 601 Score = 59.7 bits (143), Expect = 2e-07 Identities = 28/31 (90%), Positives = 29/31 (93%) Frame = -1 Query: 93 SSIENFRQAFPIVEPDSGHTKLRLSREGLEA 1 SSI+NF QAFPIVEPD GHTKLRLSREGLEA Sbjct: 23 SSIDNFHQAFPIVEPDPGHTKLRLSREGLEA 53