BLASTX nr result

ID: Coptis21_contig00029568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029568
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275124.1| PREDICTED: guanylate-binding protein 4-like ...    82   4e-14
emb|CAN71361.1| hypothetical protein VITISV_039421 [Vitis vinifera]    82   4e-14
emb|CBI17922.3| unnamed protein product [Vitis vinifera]               82   6e-14
ref|XP_002306811.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_003536798.1| PREDICTED: guanylate-binding protein 4-like ...    60   2e-07

>ref|XP_002275124.1| PREDICTED: guanylate-binding protein 4-like [Vitis vinifera]
          Length = 674

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 40/55 (72%), Positives = 43/55 (78%)
 Frame = -1

Query: 165 RKRMELSTWGVLFWILFNLFQCGYSSIENFRQAFPIVEPDSGHTKLRLSREGLEA 1
           R  ME+S W + FWI   LF  G SSIENFRQAFPIVEPD GHTKLRL+REGLEA
Sbjct: 70  RSVMEISYWVLAFWIFLCLFASGSSSIENFRQAFPIVEPDPGHTKLRLAREGLEA 124


>emb|CAN71361.1| hypothetical protein VITISV_039421 [Vitis vinifera]
          Length = 246

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 40/55 (72%), Positives = 43/55 (78%)
 Frame = -1

Query: 165 RKRMELSTWGVLFWILFNLFQCGYSSIENFRQAFPIVEPDSGHTKLRLSREGLEA 1
           R  ME+S W + FWI   LF  G SSIENFRQAFPIVEPD GHTKLRL+REGLEA
Sbjct: 114 RSVMEISYWVLAFWIFLCLFASGSSSIENFRQAFPIVEPDPGHTKLRLAREGLEA 168


>emb|CBI17922.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 39/52 (75%), Positives = 42/52 (80%)
 Frame = -1

Query: 156 MELSTWGVLFWILFNLFQCGYSSIENFRQAFPIVEPDSGHTKLRLSREGLEA 1
           ME+S W + FWI   LF  G SSIENFRQAFPIVEPD GHTKLRL+REGLEA
Sbjct: 1   MEISYWVLAFWIFLCLFASGSSSIENFRQAFPIVEPDPGHTKLRLAREGLEA 52


>ref|XP_002306811.1| predicted protein [Populus trichocarpa] gi|222856260|gb|EEE93807.1|
           predicted protein [Populus trichocarpa]
          Length = 663

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 27/52 (51%), Positives = 37/52 (71%)
 Frame = -1

Query: 156 MELSTWGVLFWILFNLFQCGYSSIENFRQAFPIVEPDSGHTKLRLSREGLEA 1
           M++S W + +W+   +F  G  SI+NF +AFPI+EPD  HTKL L+ EGLEA
Sbjct: 1   MKISRWILFYWLFLCVFASGSLSIDNFNRAFPIIEPDPNHTKLHLASEGLEA 52


>ref|XP_003536798.1| PREDICTED: guanylate-binding protein 4-like [Glycine max]
          Length = 601

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = -1

Query: 93  SSIENFRQAFPIVEPDSGHTKLRLSREGLEA 1
           SSI+NF QAFPIVEPD GHTKLRLSREGLEA
Sbjct: 23  SSIDNFHQAFPIVEPDPGHTKLRLSREGLEA 53


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