BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029546
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS15054.1| DNA-directed DNA polymerase [Daucus carota]             91   1e-16
ref|XP_003547547.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...    90   2e-16
ref|YP_004222300.1| hypothetical protein BevumaM_p062 [Beta vulg...    86   2e-15
emb|CBL54116.1| hypothetical protein (mitochondrion) [Beta vulga...    86   2e-15
dbj|BAD66818.1| orf774 [Beta vulgaris subsp. vulgaris] gi|320148...    86   2e-15

>gb|AAS15054.1| DNA-directed DNA polymerase [Daucus carota]
          Length = 774

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/78 (52%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
 Frame = +2

Query: 53  YSIILDTFEERSTKVLYDLVLRIEWIVR-QEKSPLKIYFHNFSRFDGIILLRHLACHHKN 229
           Y  I  +F++RS K+LY++V RI+ +   Q K+   IYFHN SRFDGIILL+HL CHH  
Sbjct: 50  YKAIYSSFKDRSEKILYEMVKRIDVVATTQYKTAKSIYFHNLSRFDGIILLKHLICHHPY 109

Query: 230 YKLKPLMRNNMLYELAVY 283
           Y ++PL+RN+ +YE+ VY
Sbjct: 110 YSIQPLIRNHRIYEIKVY 127


>ref|XP_003547547.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase-like [Glycine max]
          Length = 948

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/76 (55%), Positives = 53/76 (69%)
 Frame = +2

Query: 56  SIILDTFEERSTKVLYDLVLRIEWIVRQEKSPLKIYFHNFSRFDGIILLRHLACHHKNYK 235
           S +  TFEERS ++L   + R+  I RQ +S   IYFHN  RFDGI LL+HLA +H NY 
Sbjct: 465 SRVFPTFEERSCQMLKSFIFRVAAITRQNRSAKTIYFHNLGRFDGIFLLKHLALYHPNYT 524

Query: 236 LKPLMRNNMLYELAVY 283
           + PLMR+N LYE+AVY
Sbjct: 525 VTPLMRDNRLYEVAVY 540


>ref|YP_004222300.1| hypothetical protein BevumaM_p062 [Beta vulgaris subsp. maritima]
           gi|323435136|ref|YP_004222354.1| hypothetical protein
           BevumaM_p121 [Beta vulgaris subsp. maritima]
           gi|346683173|ref|YP_004842105.1| hypothetical protein
           BemaM_p058 [Beta macrocarpa]
           gi|346683227|ref|YP_004842159.1| hypothetical protein
           BemaM_p115 [Beta macrocarpa] gi|1143422|emb|CAA84068.1|
           dpo-r [Beta vulgaris subsp. vulgaris]
           gi|317905635|emb|CBJ14035.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439815|emb|CBJ17526.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|319439869|emb|CBJ17574.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500091|emb|CBX24907.1|
           hypothetical protein [Beta macrocarpa]
           gi|345500145|emb|CBX24964.1| hypothetical protein [Beta
           macrocarpa]
          Length = 774

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 39/75 (52%), Positives = 52/75 (69%)
 Frame = +2

Query: 62  ILDTFEERSTKVLYDLVLRIEWIVRQEKSPLKIYFHNFSRFDGIILLRHLACHHKNYKLK 241
           I  T  ERSTK+L D + RI  I++       +YFHNFSRFDGI++LRHL  H+  Y+++
Sbjct: 123 IFPTHMERSTKLLSDFIRRIISIIKMNPEIQTVYFHNFSRFDGILILRHLVLHNDEYEIR 182

Query: 242 PLMRNNMLYELAVYY 286
           PLMRN  LYE+ VY+
Sbjct: 183 PLMRNGRLYEVVVYF 197


>emb|CBL54116.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp.
           maritima]
          Length = 774

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 39/75 (52%), Positives = 52/75 (69%)
 Frame = +2

Query: 62  ILDTFEERSTKVLYDLVLRIEWIVRQEKSPLKIYFHNFSRFDGIILLRHLACHHKNYKLK 241
           I  T  ERSTK+L D + RI  I++       +YFHNFSRFDGI++LRHL  H+  Y+++
Sbjct: 123 IFPTHMERSTKLLSDFIRRIISIIKMNPEIQTVYFHNFSRFDGILILRHLVLHNDEYEIR 182

Query: 242 PLMRNNMLYELAVYY 286
           PLMRN  LYE+ VY+
Sbjct: 183 PLMRNGRLYEVVVYF 197


>dbj|BAD66818.1| orf774 [Beta vulgaris subsp. vulgaris] gi|320148017|emb|CBJ20683.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
          Length = 774

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 39/75 (52%), Positives = 52/75 (69%)
 Frame = +2

Query: 62  ILDTFEERSTKVLYDLVLRIEWIVRQEKSPLKIYFHNFSRFDGIILLRHLACHHKNYKLK 241
           I  T  ERSTK+L D + RI  I++       +YFHNFSRFDGI++LRHL  H+  Y+++
Sbjct: 123 IFPTHMERSTKLLSDFIRRIISIIKMNPEIQTVYFHNFSRFDGILILRHLVLHNDEYEIR 182

Query: 242 PLMRNNMLYELAVYY 286
           PLMRN  LYE+ VY+
Sbjct: 183 PLMRNGRLYEVVVYF 197