BLASTX nr result

ID: Coptis21_contig00029539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029539
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003581634.1| PREDICTED: uncharacterized protein LOC100823...    72   6e-11
dbj|BAK02374.1| predicted protein [Hordeum vulgare subsp. vulgare]     65   4e-09
dbj|BAK06126.1| predicted protein [Hordeum vulgare subsp. vulgare]     64   1e-08
ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
gb|EAY95493.1| hypothetical protein OsI_17338 [Oryza sativa Indi...    60   1e-07

>ref|XP_003581634.1| PREDICTED: uncharacterized protein LOC100823437 [Brachypodium
            distachyon]
          Length = 1110

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
 Frame = +1

Query: 4    TYADWPTVTKEIKTHLWETVSDEYDLTPDREAGVLLKANIAWKGWKYRL-RKAYDAYSTN 180
            TY  W ++ KE K  LW  V  ++D+ P  E  VL      W+ WK  L RK YD+++T 
Sbjct: 820  TYQSWKSIPKENKNVLWHIVKLKFDVDPPCELSVLKCIRKTWRCWKSHLKRKHYDSHTTE 879

Query: 181  AERIENIPKRTKKEDWESFIEICSTDEEKIKREKGKSSR 297
             ER+ +   R  KE W   +   +T++ K++  K K+SR
Sbjct: 880  EERLADRDPRVLKEQWRQLVAYWNTEKAKVRSAKSKASR 918


>dbj|BAK02374.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 439

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
 Frame = +1

Query: 4   TYADWPTVTKEIKTHLWETVSDEYDLTPDREAGVLLKANIAWKGWKYRL-RKAYDAYSTN 180
           TY  W  + KE K  +W  V  ++D+ P  E  +L      WK WK  L RK YD + T 
Sbjct: 139 TYVSWTYIPKENKDVMWHIVKLKFDVDPSHELSLLRSIRNKWKIWKCHLKRKHYDPHITE 198

Query: 181 AERIENIPKRTKKEDWESFIEICSTDEEKIKREKGKSSR 297
            ER+ +   R  KE W+  +   +T++ K +   GK+ R
Sbjct: 199 EERLADRVPRVLKEQWQVLVAYWNTEKAKARSTVGKACR 237


>dbj|BAK06126.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1084

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
 Frame = +1

Query: 4    TYADWPTVTKEIKTHLWETVSDEYDLTPDREAGVLLKANIAWKGWKYRL-RKAYDAYSTN 180
            TY  W  + KE K  +W  V  ++D+ P  E  +L      W+ WK  L RK YD + T 
Sbjct: 784  TYVSWTYIPKENKDVMWHIVKLKFDVDPSHELSLLRSIRNKWRIWKCHLKRKHYDPHITE 843

Query: 181  AERIENIPKRTKKEDWESFIEICSTDEEKIKREKGKSSR 297
             ER+ +   R  KE W+  +   +T++ K +   GK+ R
Sbjct: 844  EERLADRVPRVLKEQWQVLVAYWNTEKAKARSTVGKACR 882


>ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|222839006|gb|EEE77357.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/103 (27%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
 Frame = +1

Query: 4   TYADWPTVTKEIKTHLWETVSDEYDLTPDREAGVLLKANIAWKGWKYRLR-KAYDAYSTN 180
           T+ DW  +  E K ++W+ V  ++D+ P  +  VL      W+ WK +L+ + Y  + T+
Sbjct: 45  TFVDWFAMPDEKKENMWQFVQTKFDIEPVCKTWVLRSLASKWRNWKAKLKSEHYYPHKTD 104

Query: 181 AERIENIPKRTKKEDWESFIEICSTDEEKIKREKGKSSREHMK 309
            ER+ +  +R   E W   I   +++E +++  K K++R + K
Sbjct: 105 EERLNDRDRRVLPEQWAILISYWNSEEAQLRSAKNKANRSNQK 147


>gb|EAY95493.1| hypothetical protein OsI_17338 [Oryza sativa Indica Group]
          Length = 1041

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
 Frame = +1

Query: 4    TYADWPTVTKEIKTHLWETVSDEYDLTPDREAGVLLKANIAWKGWKYRL-RKAYDAYSTN 180
            TY  W ++ KE K  +W  +  ++ + P  E+ +L      W+ W+  L RK YD++ T 
Sbjct: 787  TYKKWKSIPKENKDVMWHIIKLKFYVAPSSESLLLKCIRTKWRNWRCNLKRKHYDSHITE 846

Query: 181  AERIENIPKRTKKEDWESFIEICSTDEEKIKREKGKSSR 297
             ER+ +   R  KE W   +   +T+E +    + K+SR
Sbjct: 847  EERLADCDPRVLKEQWRFLVAFWNTEEAQAASARCKASR 885


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