BLASTX nr result

ID: Coptis21_contig00029517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029517
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529079.1| ATP-binding cassette transporter, putative [...   164   9e-39
ref|XP_004164072.1| PREDICTED: ABC transporter G family member 3...   162   3e-38
ref|XP_004143306.1| PREDICTED: ABC transporter G family member 3...   162   3e-38
ref|XP_002529080.1| ATP-binding cassette transporter, putative [...   162   3e-38
ref|XP_003625405.1| Pleiotropic drug resistance protein [Medicag...   160   8e-38

>ref|XP_002529079.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223531491|gb|EEF33323.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1446

 Score =  164 bits (414), Expect = 9e-39
 Identities = 78/90 (86%), Positives = 87/90 (96%)
 Frame = -1

Query: 271  PKNQVTFARVSGYCEQNDIHSPHVTVYESLVYSAWLRLGSEVNKETQKMFVDEVMELVEL 92
            PKNQ TFARVSGYCEQNDIHSP+VTVYESL+YSAWLRL S+VNKET+KMFV+EVMELVEL
Sbjct: 922  PKNQATFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLASDVNKETRKMFVEEVMELVEL 981

Query: 91   NPIRDALVGLPGIDGLSTEQRKRITIAVEL 2
             P+R+ALVGLPG+DGLSTEQRKR+TIAVEL
Sbjct: 982  KPLRNALVGLPGVDGLSTEQRKRLTIAVEL 1011


>ref|XP_004164072.1| PREDICTED: ABC transporter G family member 39-like [Cucumis sativus]
          Length = 1455

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/90 (86%), Positives = 86/90 (95%)
 Frame = -1

Query: 271  PKNQVTFARVSGYCEQNDIHSPHVTVYESLVYSAWLRLGSEVNKETQKMFVDEVMELVEL 92
            PKNQ TFARVSGYCEQNDIHSPH+TVYES++YSAWLRL S VN ET+KMFV+EVMELVEL
Sbjct: 931  PKNQETFARVSGYCEQNDIHSPHLTVYESVLYSAWLRLPSSVNTETRKMFVEEVMELVEL 990

Query: 91   NPIRDALVGLPGIDGLSTEQRKRITIAVEL 2
            NP+R+ALVGLPGIDGLSTEQRKR+TIAVEL
Sbjct: 991  NPLREALVGLPGIDGLSTEQRKRLTIAVEL 1020


>ref|XP_004143306.1| PREDICTED: ABC transporter G family member 39-like [Cucumis sativus]
          Length = 1455

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/90 (86%), Positives = 86/90 (95%)
 Frame = -1

Query: 271  PKNQVTFARVSGYCEQNDIHSPHVTVYESLVYSAWLRLGSEVNKETQKMFVDEVMELVEL 92
            PKNQ TFARVSGYCEQNDIHSPH+TVYES++YSAWLRL S VN ET+KMFV+EVMELVEL
Sbjct: 931  PKNQETFARVSGYCEQNDIHSPHLTVYESVLYSAWLRLPSSVNTETRKMFVEEVMELVEL 990

Query: 91   NPIRDALVGLPGIDGLSTEQRKRITIAVEL 2
            NP+R+ALVGLPGIDGLSTEQRKR+TIAVEL
Sbjct: 991  NPLREALVGLPGIDGLSTEQRKRLTIAVEL 1020


>ref|XP_002529080.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223531492|gb|EEF33324.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1444

 Score =  162 bits (410), Expect = 3e-38
 Identities = 76/90 (84%), Positives = 87/90 (96%)
 Frame = -1

Query: 271  PKNQVTFARVSGYCEQNDIHSPHVTVYESLVYSAWLRLGSEVNKETQKMFVDEVMELVEL 92
            PKNQ TFAR+SGYCEQNDIHSP+VTVYESL+YSAWLRL ++V KET+KMFV+EVMELVEL
Sbjct: 920  PKNQATFARISGYCEQNDIHSPYVTVYESLLYSAWLRLAADVKKETRKMFVEEVMELVEL 979

Query: 91   NPIRDALVGLPGIDGLSTEQRKRITIAVEL 2
            NPIR+A+VGLPG+DGLSTEQRKR+TIAVEL
Sbjct: 980  NPIRNAIVGLPGVDGLSTEQRKRLTIAVEL 1009


>ref|XP_003625405.1| Pleiotropic drug resistance protein [Medicago truncatula]
            gi|355500420|gb|AES81623.1| Pleiotropic drug resistance
            protein [Medicago truncatula]
          Length = 1404

 Score =  160 bits (406), Expect = 8e-38
 Identities = 74/90 (82%), Positives = 85/90 (94%)
 Frame = -1

Query: 271  PKNQVTFARVSGYCEQNDIHSPHVTVYESLVYSAWLRLGSEVNKETQKMFVDEVMELVEL 92
            PK Q TFAR+SGYCEQNDIHSPHVTVYESL+YSAWLRL SE+ KET+KMF++EVMELVEL
Sbjct: 881  PKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLPSEIEKETRKMFIEEVMELVEL 940

Query: 91   NPIRDALVGLPGIDGLSTEQRKRITIAVEL 2
            NP+RDA+VGLPG+ GLSTEQRKR+T+AVEL
Sbjct: 941  NPLRDAIVGLPGVSGLSTEQRKRLTVAVEL 970


Top