BLASTX nr result
ID: Coptis21_contig00029509
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00029509 (501 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002510703.1| glutamate receptor 3 plant, putative [Ricinu... 180 1e-43 ref|XP_002301908.1| glutamate-gated kainate-type ion channel rec... 179 2e-43 ref|XP_002306988.1| glutamate-gated kainate-type ion channel rec... 179 2e-43 ref|XP_002272859.1| PREDICTED: glutamate receptor 3.3 [Vitis vin... 178 5e-43 emb|CAN72607.1| hypothetical protein VITISV_021339 [Vitis vinifera] 178 5e-43 >ref|XP_002510703.1| glutamate receptor 3 plant, putative [Ricinus communis] gi|223551404|gb|EEF52890.1| glutamate receptor 3 plant, putative [Ricinus communis] Length = 927 Score = 180 bits (456), Expect = 1e-43 Identities = 94/166 (56%), Positives = 109/166 (65%), Gaps = 1/166 (0%) Frame = +2 Query: 5 LAQKRCRISYKVGIPPLIRVNSDDIIDILVKVMSLESRIIVLHTNPDSGFMVFSIAKHLG 184 LA +RCRISYKVGI P VN +I+DILVKV +ESR+I+LH N GF VFS+AK+LG Sbjct: 188 LAVRRCRISYKVGIEPEAEVNKGNIMDILVKVALMESRVIILHLNSKLGFTVFSVAKYLG 247 Query: 185 MMDNGYVWIATDW-XXXXXXXXXXXXXNMENMQGVLVLRQHTADSERKRDFFSRWNKXXX 361 MM NGYVWIATDW M+ MQGVL LRQHT S+RKR F S W+K Sbjct: 248 MMGNGYVWIATDWLSSFLDTFSPLPSETMDTMQGVLALRQHTPQSDRKRSFSSAWSKLTG 307 Query: 362 XXXXXXXXXXXXXDTVWLIAHAVNAFFYQGGIISFSNVSRLHDLEG 499 D+VWLIAHA++AF QGGIISFSN SRLH +EG Sbjct: 308 GSFGLNSYGLYAYDSVWLIAHAIDAFLDQGGIISFSNDSRLHSVEG 353 >ref|XP_002301908.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] gi|222843634|gb|EEE81181.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] Length = 859 Score = 179 bits (455), Expect = 2e-43 Identities = 90/165 (54%), Positives = 112/165 (67%), Gaps = 1/165 (0%) Frame = +2 Query: 5 LAQKRCRISYKVGIPPLIRVNSDDIIDILVKVMSLESRIIVLHTNPDSGFMVFSIAKHLG 184 LA++RCRISYKVG+PP VN DI+D+L+KV S+ESR+IVLH NPD GF VFS+A L Sbjct: 180 LAERRCRISYKVGVPPDSGVNRTDILDMLIKVASMESRVIVLHVNPDVGFEVFSVANRLQ 239 Query: 185 MMDNGYVWIATDW-XXXXXXXXXXXXXNMENMQGVLVLRQHTADSERKRDFFSRWNKXXX 361 MM NG+VWIAT+W M+++QGVL RQHT DS+RKR F+SRW K Sbjct: 240 MMGNGWVWIATNWLSSVLDSASPLPSETMDSIQGVLFFRQHTPDSDRKRAFYSRWRKLTG 299 Query: 362 XXXXXXXXXXXXXDTVWLIAHAVNAFFYQGGIISFSNVSRLHDLE 496 D+VWLIAHA++AFF QGGIISF+N SRL ++ Sbjct: 300 GSLGLNSYGLYAYDSVWLIAHAIDAFFNQGGIISFTNYSRLRSVK 344 >ref|XP_002306988.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] gi|222856437|gb|EEE93984.1| glutamate-gated kainate-type ion channel receptor subunit GluR5 [Populus trichocarpa] Length = 897 Score = 179 bits (454), Expect = 2e-43 Identities = 93/166 (56%), Positives = 112/166 (67%), Gaps = 1/166 (0%) Frame = +2 Query: 5 LAQKRCRISYKVGIPPLIRVNSDDIIDILVKVMSLESRIIVLHTNPDSGFMVFSIAKHLG 184 LA++RCRISYKVGIPP VN DI+DILVKV +ESR++++H PD GF +FS+A HL Sbjct: 179 LAERRCRISYKVGIPPDSGVNRGDIMDILVKVALMESRVVIVHVYPDMGFKIFSMANHLE 238 Query: 185 MMDNGYVWIATDW-XXXXXXXXXXXXXNMENMQGVLVLRQHTADSERKRDFFSRWNKXXX 361 MM NG+VWIATDW M+++QGVLVLRQHT DS+R R F SRW+K Sbjct: 239 MMGNGWVWIATDWLSSVLDSASPLPSETMDSVQGVLVLRQHTPDSDRNRAFSSRWHKLTG 298 Query: 362 XXXXXXXXXXXXXDTVWLIAHAVNAFFYQGGIISFSNVSRLHDLEG 499 D+VWLIAHA++AFF QGGIISFSN SRL EG Sbjct: 299 GYLGLHSYGLYAYDSVWLIAHALDAFFNQGGIISFSNDSRLPSGEG 344 >ref|XP_002272859.1| PREDICTED: glutamate receptor 3.3 [Vitis vinifera] gi|297745576|emb|CBI40741.3| unnamed protein product [Vitis vinifera] Length = 934 Score = 178 bits (451), Expect = 5e-43 Identities = 93/161 (57%), Positives = 110/161 (68%), Gaps = 1/161 (0%) Frame = +2 Query: 5 LAQKRCRISYKVGIPPLIRVNSDDIIDILVKVMSLESRIIVLHTNPDSGFMVFSIAKHLG 184 LA+KR +IS+K GIPP + DI+DILVKV LESRIIVLH NPD GF VFS+A++LG Sbjct: 188 LAEKRLKISHKEGIPPGASASQGDIMDILVKVSVLESRIIVLHVNPDIGFKVFSVARYLG 247 Query: 185 MMDNGYVWIATDWXXXXXXXXXXXXXN-MENMQGVLVLRQHTADSERKRDFFSRWNKXXX 361 MM NGYVWIATDW + M++MQGVLVLR+HT DS+RKR F SRW K Sbjct: 248 MMQNGYVWIATDWLSSVLDTSSPLASDTMDSMQGVLVLRRHTPDSDRKRAFLSRWKKLTG 307 Query: 362 XXXXXXXXXXXXXDTVWLIAHAVNAFFYQGGIISFSNVSRL 484 DTVWL+AHA++AFF QGG ISFSN S+L Sbjct: 308 GSLGLNSYGLYAYDTVWLLAHALDAFFNQGGTISFSNDSKL 348 >emb|CAN72607.1| hypothetical protein VITISV_021339 [Vitis vinifera] Length = 916 Score = 178 bits (451), Expect = 5e-43 Identities = 93/161 (57%), Positives = 110/161 (68%), Gaps = 1/161 (0%) Frame = +2 Query: 5 LAQKRCRISYKVGIPPLIRVNSDDIIDILVKVMSLESRIIVLHTNPDSGFMVFSIAKHLG 184 LA+KR +IS+K GIPP + DI+DILVKV LESRIIVLH NPD GF VFS+A++LG Sbjct: 170 LAEKRLKISHKEGIPPGASASQGDIMDILVKVSVLESRIIVLHVNPDIGFKVFSVARYLG 229 Query: 185 MMDNGYVWIATDWXXXXXXXXXXXXXN-MENMQGVLVLRQHTADSERKRDFFSRWNKXXX 361 MM NGYVWIATDW + M++MQGVLVLR+HT DS+RKR F SRW K Sbjct: 230 MMQNGYVWIATDWLSSVLDTSSPLASDTMDSMQGVLVLRRHTPDSDRKRAFLSRWKKLTG 289 Query: 362 XXXXXXXXXXXXXDTVWLIAHAVNAFFYQGGIISFSNVSRL 484 DTVWL+AHA++AFF QGG ISFSN S+L Sbjct: 290 GSLGLNSYGLYAYDTVWLLAHALDAFFNQGGTISFSNDSKL 330