BLASTX nr result

ID: Coptis21_contig00029507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029507
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                 56   2e-15
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]    54   1e-14
emb|CAN75582.1| hypothetical protein VITISV_015970 [Vitis vinifera]    59   5e-14
emb|CAN67073.1| hypothetical protein VITISV_011746 [Vitis vinifera]    61   9e-14
emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera]    52   2e-13

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 56.2 bits (134), Expect(2) = 2e-15
 Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
 Frame = +1

Query: 115  TFWSMY--DILITGNSPTYCSSLIQQLSCSFAMKDLGPLHFFLGIEVNRDKTGIFL 276
            TF  +Y  DI+ITG+S T C S+I QL   F +KDLG +++FLGIEV++   G+ L
Sbjct: 1336 TFILVYVDDIIITGSSVTECQSIISQLQTMFPVKDLGDINYFLGIEVHKSDQGLLL 1391



 Score = 50.4 bits (119), Expect(2) = 2e-15
 Identities = 25/43 (58%), Positives = 31/43 (72%)
 Frame = +3

Query: 3    APRVWYEALVQALLSQGFHLSKADPSLFVRFKDDCITYILVYV 131
            APR WYEA   A+LS GF  S +D SLF++ +D  IT+ILVYV
Sbjct: 1301 APRAWYEAFYTAILSLGFSSSHSDTSLFIK-RDTSITFILVYV 1342


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score = 53.9 bits (128), Expect(2) = 1e-14
 Identities = 26/43 (60%), Positives = 33/43 (76%)
 Frame = +3

Query: 3    APRVWYEALVQALLSQGFHLSKADPSLFVRFKDDCITYILVYV 131
            APR W+E L +ALLS GF  +K+D SLF+RF  + ITY+LVYV
Sbjct: 1089 APRAWFEKLHRALLSFGFVSAKSDQSLFLRFTPNHITYVLVYV 1131



 Score = 50.1 bits (118), Expect(2) = 1e-14
 Identities = 22/48 (45%), Positives = 33/48 (68%)
 Frame = +1

Query: 133  DILITGNSPTYCSSLIQQLSCSFAMKDLGPLHFFLGIEVNRDKTGIFL 276
            DIL+ G+     +SLI QL+  F++KDLG +H+FLGI+V+    G+ L
Sbjct: 1133 DILVIGSDTAAITSLIAQLNSEFSLKDLGEVHYFLGIQVSHTNNGLHL 1180


>emb|CAN75582.1| hypothetical protein VITISV_015970 [Vitis vinifera]
          Length = 1022

 Score = 58.5 bits (140), Expect(2) = 5e-14
 Identities = 27/48 (56%), Positives = 36/48 (75%)
 Frame = +1

Query: 133 DILITGNSPTYCSSLIQQLSCSFAMKDLGPLHFFLGIEVNRDKTGIFL 276
           D +ITGN+PT  +S+I+QL   F++KD+G LHFFLGIEV   K  +FL
Sbjct: 801 DFVITGNNPTLVASIIKQLGDMFSLKDIGSLHFFLGIEVIPTKAXLFL 848



 Score = 43.5 bits (101), Expect(2) = 5e-14
 Identities = 22/46 (47%), Positives = 26/46 (56%)
 Frame = +3

Query: 3   APRVWYEALVQALLSQGFHLSKADPSLFVRFKDDCITYILVYV*HF 140
           AP  WY  L  A+L  GF  SKAD SLF+  +   + Y LVYV  F
Sbjct: 757 APWAWYTTLKTAILQLGFQNSKADSSLFIYSQGSTLCYFLVYVDDF 802


>emb|CAN67073.1| hypothetical protein VITISV_011746 [Vitis vinifera]
          Length = 879

 Score = 61.2 bits (147), Expect(2) = 9e-14
 Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
 Frame = +1

Query: 109 LHTFWSMY--DILITGNSPTYCSSLIQQLSCSFAMKDLGPLHFFLGIEVNRDKTGIFL 276
           +H F  +Y  DIL+TG  P+   SLIQ+L   F MKDLGPL +FLGI+ +RD +G+ L
Sbjct: 592 IHLFILIYVDDILVTGTXPSLIXSLIQKLQTEFKMKDLGPLGYFLGIQASRDSSGLHL 649



 Score = 40.0 bits (92), Expect(2) = 9e-14
 Identities = 21/43 (48%), Positives = 24/43 (55%)
 Frame = +3

Query: 3   APRVWYEALVQALLSQGFHLSKADPSLFVRFKDDCITYILVYV 131
           APR W+  L Q LL  GF  S  D SLFV  K     +IL+YV
Sbjct: 558 APRAWFMRLSQTLLEFGFLSSPVDASLFVYHKGHIHLFILIYV 600


>emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera]
          Length = 1079

 Score = 51.6 bits (122), Expect(2) = 2e-13
 Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
 Frame = +1

Query: 115  TFWSMY--DILITGNSPTYCSSLIQQLSCSFAMKDLGPLHFFLGIEVNRDKTGIFL 276
            TF  +Y  DIL+TG++P     LI QL+ SF++KDLG + +FLGI+V     G+ L
Sbjct: 895  TFLLVYVDDILVTGSNPCVIQQLISQLNKSFSLKDLGEIDYFLGIQVKHTTEGLHL 950



 Score = 48.5 bits (114), Expect(2) = 2e-13
 Identities = 23/43 (53%), Positives = 29/43 (67%)
 Frame = +3

Query: 3   APRVWYEALVQALLSQGFHLSKADPSLFVRFKDDCITYILVYV 131
           APR W+E L +AL+  GF  +K D SLF RF  D  T++LVYV
Sbjct: 859 APRAWFEKLYEALVDLGFTSAKFDRSLFTRFTMDHTTFLLVYV 901


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