BLASTX nr result

ID: Coptis21_contig00029503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00029503
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like...   219   3e-55
emb|CBI27790.3| unnamed protein product [Vitis vinifera]              216   3e-54
ref|XP_003595317.1| ATP-dependent DNA helicase Q1 [Medicago trun...   211   7e-53
gb|AAR14271.1| predicted protein [Populus tremula x Populus alba]     209   2e-52
ref|XP_004141074.1| PREDICTED: ATP-dependent DNA helicase Q-like...   207   9e-52

>ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Vitis
           vinifera]
          Length = 730

 Score =  219 bits (557), Expect = 3e-55
 Identities = 108/153 (70%), Positives = 119/153 (77%)
 Frame = +1

Query: 103 FRMGIDRKDVRTVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGIDDRRRMEFILSNP 282
           F MGIDRKDVR VCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGIDDR+RMEFILSN 
Sbjct: 316 FGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGIDDRKRMEFILSNA 375

Query: 283 ANKRLHPXXXXXXXXXXXLEDFNQMVEYCEGSFCRRRKILESFGEQVPTSLCQKSCDVCR 462
            +K+L             L DF+ MVEYCEGS CRR+KILE+FGEQV  S+C+KSCD C+
Sbjct: 376 ESKKLQSSSSQDGMSKKSLADFSHMVEYCEGSSCRRKKILENFGEQVAASICRKSCDACK 435

Query: 463 HPKLVAKYLEELTCASNLHKANSRSRIFVCSSS 561
           HP LVAKYLEE   A  L + N  SRIF+ SSS
Sbjct: 436 HPNLVAKYLEEFASACALRQNNVFSRIFISSSS 468


>emb|CBI27790.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  216 bits (549), Expect = 3e-54
 Identities = 106/151 (70%), Positives = 118/151 (78%)
 Frame = +1

Query: 109 MGIDRKDVRTVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGIDDRRRMEFILSNPAN 288
           +GIDRKDVR VCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGIDDR+RMEFILSN  +
Sbjct: 335 IGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGIDDRKRMEFILSNAES 394

Query: 289 KRLHPXXXXXXXXXXXLEDFNQMVEYCEGSFCRRRKILESFGEQVPTSLCQKSCDVCRHP 468
           K+L             L DF+ MVEYCEGS CRR+KILE+FGEQV  S+C+KSCD C+HP
Sbjct: 395 KKLQSSSSQDGMSKKSLADFSHMVEYCEGSSCRRKKILENFGEQVAASICRKSCDACKHP 454

Query: 469 KLVAKYLEELTCASNLHKANSRSRIFVCSSS 561
            LVAKYLEE   A  L + N  SRIF+ SSS
Sbjct: 455 NLVAKYLEEFASACALRQNNVFSRIFISSSS 485


>ref|XP_003595317.1| ATP-dependent DNA helicase Q1 [Medicago truncatula]
           gi|355484365|gb|AES65568.1| ATP-dependent DNA helicase
           Q1 [Medicago truncatula]
          Length = 776

 Score =  211 bits (537), Expect = 7e-53
 Identities = 111/175 (63%), Positives = 124/175 (70%)
 Frame = +1

Query: 37  ARWILFGALPLHTWMLGNNCFFFRMGIDRKDVRTVCHFNIPKSMEAFYQESGRAGRDQLP 216
           A  I +   P  +  L N    FRMGIDRKDVR VCHFNIPKSMEAFYQESGRAGRDQLP
Sbjct: 348 ATGIAWTTTPAESIGLPNLWCSFRMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLP 407

Query: 217 SRSLLYYGIDDRRRMEFILSNPANKRLHPXXXXXXXXXXXLEDFNQMVEYCEGSFCRRRK 396
           S SLLYYG+DDRRRMEFIL N  NK+              L  FNQMVEYCEGS CRR+ 
Sbjct: 408 STSLLYYGVDDRRRMEFILRNSGNKKSQSSSSQEESTRMSLTAFNQMVEYCEGSGCRRKI 467

Query: 397 ILESFGEQVPTSLCQKSCDVCRHPKLVAKYLEELTCASNLHKANSRSRIFVCSSS 561
           ILESFGEQV TSLC K+CD CRHP LVA+ LE+LT A +L +    SR+F+ SS+
Sbjct: 468 ILESFGEQVTTSLCGKTCDSCRHPNLVARNLEDLTAACSLRQRGG-SRVFITSST 521


>gb|AAR14271.1| predicted protein [Populus tremula x Populus alba]
          Length = 772

 Score =  209 bits (532), Expect = 2e-52
 Identities = 102/153 (66%), Positives = 118/153 (77%)
 Frame = +1

Query: 103 FRMGIDRKDVRTVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGIDDRRRMEFILSNP 282
           F MGIDRKDVR VCHFNIPKSME+FYQESGRAGRDQLPS+SLLYYG+DDR++MEFIL N 
Sbjct: 314 FGMGIDRKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSKSLLYYGVDDRKKMEFILRNA 373

Query: 283 ANKRLHPXXXXXXXXXXXLEDFNQMVEYCEGSFCRRRKILESFGEQVPTSLCQKSCDVCR 462
            NK+L             L DFN M+EYCEG+ CRR+KILESFGEQV  +LC+KSCD C+
Sbjct: 374 ENKKLQSSSSGGELSKKSLTDFNLMIEYCEGAGCRRKKILESFGEQVSATLCKKSCDACK 433

Query: 463 HPKLVAKYLEELTCASNLHKANSRSRIFVCSSS 561
           HP LVAKYLEELT  S   + N  SR+F+  S+
Sbjct: 434 HPNLVAKYLEELT-TSIARQRNGFSRVFMSRST 465


>ref|XP_004141074.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Cucumis
           sativus] gi|449488107|ref|XP_004157941.1| PREDICTED:
           ATP-dependent DNA helicase Q-like 3-like [Cucumis
           sativus]
          Length = 729

 Score =  207 bits (527), Expect = 9e-52
 Identities = 106/156 (67%), Positives = 121/156 (77%), Gaps = 3/156 (1%)
 Frame = +1

Query: 103 FRMGIDRKDVRTVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGIDDRRRMEFILSN- 279
           F MGIDRKDVR VCHFNIPKSMEAFYQESGRAGRDQLPS+SLLYYGI+DRRRMEFIL N 
Sbjct: 316 FGMGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNR 375

Query: 280 -PANKRLHP-XXXXXXXXXXXLEDFNQMVEYCEGSFCRRRKILESFGEQVPTSLCQKSCD 453
             A+K++ P            L DF QMVEYCEGS CRR++ILESFGEQVP S+C +SCD
Sbjct: 376 SSADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCD 435

Query: 454 VCRHPKLVAKYLEELTCASNLHKANSRSRIFVCSSS 561
            C+HP ++A YLEELT  S + + NS SRIFV  S+
Sbjct: 436 ACKHPNIIAAYLEELT-TSAVRRNNSSSRIFVSRSN 470


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