BLASTX nr result

ID: Coptis21_contig00028977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028977
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281702.1| PREDICTED: uncharacterized protein LOC100264...    70   7e-10
ref|XP_002302477.1| predicted protein [Populus trichocarpa] gi|2...    66   8e-09
ref|XP_002326890.1| predicted protein [Populus trichocarpa] gi|2...    59   1e-06
ref|XP_002510352.1| heat shock protein binding protein, putative...    57   5e-06

>ref|XP_002281702.1| PREDICTED: uncharacterized protein LOC100264365 [Vitis vinifera]
           gi|302142455|emb|CBI19658.3| unnamed protein product
           [Vitis vinifera]
          Length = 766

 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 54/150 (36%), Positives = 67/150 (44%), Gaps = 5/150 (3%)
 Frame = +3

Query: 84  FRASLLPPMLS--LPVKMPREMDSPAFLAQSRSLRKSKETAPPGSPTSRFSAQVFQGQES 257
           F +S  P  LS  LP K+ R MD  +     R    S  ++ P SP SRFS Q  QGQ+ 
Sbjct: 158 FGSSSNPAQLSTSLPSKVTRAMDFHSL----REPGASNGSSYPYSPPSRFSNQTIQGQDG 213

Query: 258 LKNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQ---CKGNSNSPQVTYNSNQFHFSI 428
           LKND                              D     +  SNS +V  N++Q HFS+
Sbjct: 214 LKNDPWPSYRQSRLSHEFSLAGDESPKLTTSNRADMGDNLENGSNSSKVEINTSQSHFSL 273

Query: 429 YKWASKGVPANVLQPLREVNKLSPTENSKT 518
           YKWASKGVP   + PLR +N       SKT
Sbjct: 274 YKWASKGVP--FVTPLRRLNSSRTKVKSKT 301


>ref|XP_002302477.1| predicted protein [Populus trichocarpa] gi|222844203|gb|EEE81750.1|
           predicted protein [Populus trichocarpa]
          Length = 615

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 45/145 (31%), Positives = 62/145 (42%), Gaps = 6/145 (4%)
 Frame = +3

Query: 99  LPPMLSLPVKMPREMDSPAFLAQSRSLRKSKETAPPG------SPTSRFSAQVFQGQESL 260
           LP   SLP K+ +  D P F++ +R   K+K+ A  G      SP SR ++     ++ L
Sbjct: 155 LPAQFSLPAKLIKGTDLPTFISSARDHHKNKDGASNGISNYTYSPLSRSASLTNLVRDEL 214

Query: 261 KNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQCKGNSNSPQVTYNSNQFHFSIYKWA 440
            ND                                 K +S+  ++  N NQFHFSIYKWA
Sbjct: 215 TNDVSWQSALSKEPSLCSEESSNVTKPEETDKSRNLKRDSDGSEIPTNRNQFHFSIYKWA 274

Query: 441 SKGVPANVLQPLREVNKLSPTENSK 515
           +KG+P     PLR  NK    E  K
Sbjct: 275 TKGLP--FAMPLRGANKSRLNEKCK 297


>ref|XP_002326890.1| predicted protein [Populus trichocarpa] gi|222835205|gb|EEE73640.1|
           predicted protein [Populus trichocarpa]
          Length = 725

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 53/191 (27%), Positives = 73/191 (38%), Gaps = 3/191 (1%)
 Frame = +3

Query: 99  LPPMLSLPVKMPREMDSPAFLAQSRSLRKSKETAPPGSPTSRFSA-QVFQGQESLKNDXX 275
           LP   SL  K+ +  D P F + + S+ K+K+ A  G      SA Q    ++ L ND  
Sbjct: 155 LPAQFSLSAKLSKRTDLPTFNSSAHSMHKNKDGASYGVGNYAHSASQTDHVRDELTNDIS 214

Query: 276 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDQCKGNSNSPQVTYNSNQFHFSIYKWASKGVP 455
                                          K +S+S  V  N NQ HFSIYKWAS+G+P
Sbjct: 215 RQSTLSKELSLTSEESSNSTKHEETDTNTNLKSDSDSSDVPTNGNQSHFSIYKWASEGIP 274

Query: 456 ANVLQPLREVNKLSPTENSKTG--SRVFEYAAXXXXXXELLSGNDNMLAENESLQGTQEN 629
              +  LR   K    EN +    S    + A      EL S N + +         + N
Sbjct: 275 --FVMSLRGATKSRLDENCELQRCSSASGWIASEGIARELRSANPHDIDVPSFSSHIELN 332

Query: 630 HDDNLVLNAKT 662
             DN  L  K+
Sbjct: 333 QQDNRFLFDKS 343


>ref|XP_002510352.1| heat shock protein binding protein, putative [Ricinus communis]
           gi|223551053|gb|EEF52539.1| heat shock protein binding
           protein, putative [Ricinus communis]
          Length = 770

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 49/161 (30%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
 Frame = +3

Query: 84  FRASLLPPMLSLPVKMPREMDSPAFLAQSRSLRKSKE------TAPPGSPTSRFSAQVFQ 245
           F ++ LP   SLP K+ +  D P F + +R+  K+K+      ++   SP SR S+Q   
Sbjct: 145 FPSASLPAQFSLPAKLIKGTDLPTFGSSARNHHKNKDGNSNAMSSYAYSPLSRVSSQ--- 201

Query: 246 GQESLKNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQCKGNSNSPQVTYNSNQFHFS 425
             E+L  +                              D+          T NSN+FHFS
Sbjct: 202 --ENLVEESRSDVYIKSSLSREPSVNSLESSLEKPDEMDKGGNLKKDSSETSNSNRFHFS 259

Query: 426 IYKWASKGVPANVLQPLREVN------KLSPTENSKTGSRV 530
           IYKWASKGVP  +  PLR  N      K+    +S T  RV
Sbjct: 260 IYKWASKGVP--LALPLRGGNTSKLKEKVKLERSSSTSGRV 298


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