BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028893
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31329.3| unnamed protein product [Vitis vinifera]              254   4e-66
ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containi...   254   4e-66
emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]   254   4e-66
ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containi...   253   1e-65
ref|XP_002528032.1| pentatricopeptide repeat-containing protein,...   249   1e-64

>emb|CBI31329.3| unnamed protein product [Vitis vinifera]
          Length = 753

 Score =  254 bits (650), Expect = 4e-66
 Identities = 117/171 (68%), Positives = 144/171 (84%)
 Frame = -2

Query: 515 ILPLCARIANLQHGKELHCYILKRGQFEDFLLPWNSLVDTYSKSGKVSEARRVFSLMKKK 336
           +LPLCAR+ANLQHGKE HCY+ +R  F+D LL WN+LVD Y++SGKV EARRVF ++ ++
Sbjct: 399 VLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGER 458

Query: 335 DEVTYTSLIAGLGMQGEGEAAIELFEEMNKCGVKPDHIAMVAVLSACSHSGLVSQGEMLF 156
           D++TYTS+IAG GMQGEG+AA++LFEEMN   +KPDHI M+AVLSACSHSGLV+QG++LF
Sbjct: 459 DKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLF 518

Query: 155 EKMISVYKLNPRMEHFACMVDLFGRAGLLRKAAETIMGMPFSPSQAMWATL 3
           EKM S+Y L P +EHFACM DLFGRAGLL KA E I  MP+ P+ AMWATL
Sbjct: 519 EKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATL 569


>ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Vitis vinifera]
          Length = 748

 Score =  254 bits (650), Expect = 4e-66
 Identities = 117/171 (68%), Positives = 144/171 (84%)
 Frame = -2

Query: 515 ILPLCARIANLQHGKELHCYILKRGQFEDFLLPWNSLVDTYSKSGKVSEARRVFSLMKKK 336
           +LPLCAR+ANLQHGKE HCY+ +R  F+D LL WN+LVD Y++SGKV EARRVF ++ ++
Sbjct: 444 VLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGER 503

Query: 335 DEVTYTSLIAGLGMQGEGEAAIELFEEMNKCGVKPDHIAMVAVLSACSHSGLVSQGEMLF 156
           D++TYTS+IAG GMQGEG+AA++LFEEMN   +KPDHI M+AVLSACSHSGLV+QG++LF
Sbjct: 504 DKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLF 563

Query: 155 EKMISVYKLNPRMEHFACMVDLFGRAGLLRKAAETIMGMPFSPSQAMWATL 3
           EKM S+Y L P +EHFACM DLFGRAGLL KA E I  MP+ P+ AMWATL
Sbjct: 564 EKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATL 614


>emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
          Length = 822

 Score =  254 bits (650), Expect = 4e-66
 Identities = 117/171 (68%), Positives = 144/171 (84%)
 Frame = -2

Query: 515  ILPLCARIANLQHGKELHCYILKRGQFEDFLLPWNSLVDTYSKSGKVSEARRVFSLMKKK 336
            +LPLCAR+ANLQHGKE HCY+ +R  F+D LL WN+LVD Y++SGKV EARRVF ++ ++
Sbjct: 518  VLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGER 577

Query: 335  DEVTYTSLIAGLGMQGEGEAAIELFEEMNKCGVKPDHIAMVAVLSACSHSGLVSQGEMLF 156
            D++TYTS+IAG GMQGEG+AA++LFEEMN   +KPDHI M+AVLSACSHSGLV+QG++LF
Sbjct: 578  DKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLF 637

Query: 155  EKMISVYKLNPRMEHFACMVDLFGRAGLLRKAAETIMGMPFSPSQAMWATL 3
            EKM S+Y L P +EHFACM DLFGRAGLL KA E I  MP+ P+ AMWATL
Sbjct: 638  EKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATL 688



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 39/151 (25%), Positives = 74/151 (49%)
 Frame = -2

Query: 512 LPLCARIANLQHGKELHCYILKRGQFEDFLLPWNSLVDTYSKSGKVSEARRVFSLMKKKD 333
           L  C+ I + + GKE+H + + R  F +     NSL+  YS+   +  A  +F LM+ K 
Sbjct: 418 LGACSHIGDAKLGKEIHSFAI-RSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQLMEAKS 476

Query: 332 EVTYTSLIAGLGMQGEGEAAIELFEEMNKCGVKPDHIAMVAVLSACSHSGLVSQGEMLFE 153
            +++ S+I+G       E A  L  EM   G++P+++ + +VL  C+    +  G+    
Sbjct: 477 LISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFHC 536

Query: 152 KMISVYKLNPRMEHFACMVDLFGRAGLLRKA 60
            M         +  +  +VD++ R+G + +A
Sbjct: 537 YMTRREDFKDHLLLWNALVDMYARSGKVLEA 567


>ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Glycine max]
          Length = 723

 Score =  253 bits (645), Expect = 1e-65
 Identities = 116/171 (67%), Positives = 144/171 (84%)
 Frame = -2

Query: 515 ILPLCARIANLQHGKELHCYILKRGQFEDFLLPWNSLVDTYSKSGKVSEARRVFSLMKKK 336
           +LPLCARIANLQHGKE HCYI+K  QFE++LL WN+LVD YS+SG+V EAR+VF  + K+
Sbjct: 424 VLPLCARIANLQHGKEFHCYIMKHKQFEEYLLLWNALVDMYSRSGRVLEARKVFDSLTKR 483

Query: 335 DEVTYTSLIAGLGMQGEGEAAIELFEEMNKCGVKPDHIAMVAVLSACSHSGLVSQGEMLF 156
           DEVTYTS+I G GM+GEGE  ++LFEEM K  +KPDH+ MVAVL+ACSHSGLV+QG++LF
Sbjct: 484 DEVTYTSMILGYGMKGEGETTLKLFEEMCKLEIKPDHVTMVAVLTACSHSGLVAQGQVLF 543

Query: 155 EKMISVYKLNPRMEHFACMVDLFGRAGLLRKAAETIMGMPFSPSQAMWATL 3
           ++MI V+ + PR+EH+ACM DLFGRAGLL KA E I GMP+ P+ AMWATL
Sbjct: 544 KRMIDVHGIVPRLEHYACMADLFGRAGLLNKAKEFITGMPYKPTSAMWATL 594



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/111 (29%), Positives = 55/111 (49%)
 Frame = -2

Query: 515 ILPLCARIANLQHGKELHCYILKRGQFEDFLLPWNSLVDTYSKSGKVSEARRVFSLMKKK 336
           +L  C    +   G E+H  I +    E  L   N+LV  Y + GK+  AR +F  M ++
Sbjct: 188 VLKACGESLDFNSGLEVHRSI-EASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRR 246

Query: 335 DEVTYTSLIAGLGMQGEGEAAIELFEEMNKCGVKPDHIAMVAVLSACSHSG 183
           D V++ ++I+    +G  + A +LF  M + GV+ + I    +   C HSG
Sbjct: 247 DSVSWNTIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSG 297


>ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532562|gb|EEF34350.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 730

 Score =  249 bits (637), Expect = 1e-64
 Identities = 119/171 (69%), Positives = 141/171 (82%)
 Frame = -2

Query: 515 ILPLCARIANLQHGKELHCYILKRGQFEDFLLPWNSLVDTYSKSGKVSEARRVFSLMKKK 336
           ILPLCAR+ANLQHGKE HCYIL+R  F+D+LL WNSLVD Y++SGKV EA+R+F  + ++
Sbjct: 437 ILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSISRR 496

Query: 335 DEVTYTSLIAGLGMQGEGEAAIELFEEMNKCGVKPDHIAMVAVLSACSHSGLVSQGEMLF 156
           DEVTYTSLIAG G+QGEG  A++LF+EM K  +KPDH+ MVAVLSACSHSGLV++G  LF
Sbjct: 497 DEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLF 556

Query: 155 EKMISVYKLNPRMEHFACMVDLFGRAGLLRKAAETIMGMPFSPSQAMWATL 3
           E M S Y + PR+EHFACMVDLFGRAGLL KA E I  MP+ PS AMWATL
Sbjct: 557 ELMPSAYGIIPRLEHFACMVDLFGRAGLLHKAKEMITRMPYRPSSAMWATL 607



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
 Frame = -2

Query: 515 ILPLCARIANLQHGKELHCYILKRGQFEDFLLPWN-----SLVDTYSKSGKVSEARRVFS 351
           +L  C    ++  GK+LH  I          L WN     SLV  Y+K+G++S AR +F 
Sbjct: 200 VLKACGEKLDIAFGKKLHASI------NASCLGWNLFVHNSLVSMYAKTGELSTARCLFE 253

Query: 350 LMKKKDEVTYTSLIAGLGMQGEGEAAIELFEEMNKCGVKPDHIAMVAVLSACSHSGLVSQ 171
            M ++D+V++ ++I+G   +G  + A ELF +M   G++ + I    +   C  SG   +
Sbjct: 254 NMLERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSGNFEE 313

Query: 170 GEMLFEKMIS 141
              L   M S
Sbjct: 314 ALELLSHMRS 323