BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028766
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95319.1| retrotransposon protein, putative, unclassified [...   238   6e-61
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...   233   2e-59
gb|ADB85304.1| putative retrotransposon protein [Phyllostachys e...   229   2e-58
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]        229   2e-58
emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group]                228   9e-58

>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score =  238 bits (607), Expect = 6e-61
 Identities = 116/206 (56%), Positives = 147/206 (71%), Gaps = 3/206 (1%)
 Frame = +1

Query: 1    HPQTDGQTERTNACLENYLRCMVSNKPTN*FKWLHLAE*WFNTNFHTSLKMSPFQALYGY 180
            HPQTDGQTER N CLE+YLRCM   +P N   W+ LAE W+NT +HT+++M+PF+ALYGY
Sbjct: 701  HPQTDGQTERVNQCLESYLRCMTFQEPQNWCSWIALAEWWYNTTYHTAIQMTPFKALYGY 760

Query: 181  SPPHPA---FPSDVTTSIAAVEEYLKHRNGMLEIVKEGLHKAQERMKWYADKKRTERSFE 351
            SPP  +    P DV+         L+ +  +++ +K  +  AQ RMK+YAD+ RTER  E
Sbjct: 761  SPPQISEFSVPCDVSQEARVT---LEEKETIVQKLKASMEDAQRRMKYYADRNRTERKLE 817

Query: 352  LGDWVYLKLQPYRQTSVTIRKNLKLSAKFYGPFRVLAKVGAVAYKLELPTGSKIHPVFHV 531
            +GD VYLKLQPYRQ +  IR +LKL  K+YGPF+VL KVGAVAY+L+LP  + IHPVFHV
Sbjct: 818  VGDMVYLKLQPYRQNAFGIRGSLKLRGKYYGPFKVLEKVGAVAYRLQLPEEAAIHPVFHV 877

Query: 532  SQLKKKLGTSVPPMPSLPMVDQSGQM 609
            SQLKK LGT   PMP+LP V   GQ+
Sbjct: 878  SQLKKHLGTHAVPMPNLPAVGPDGQI 903


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score =  233 bits (595), Expect = 2e-59
 Identities = 115/206 (55%), Positives = 149/206 (72%), Gaps = 3/206 (1%)
 Frame = +1

Query: 1    HPQTDGQTERTNACLENYLRCMVSNKPTN*FKWLHLAE*WFNTNFHTSLKMSPFQALYGY 180
            HPQTDGQTER N CLE+YLR M   +P   F WL LAE W+NT +HTS++M+PFQALYGY
Sbjct: 1357 HPQTDGQTERVNQCLESYLRSMTFQEPQKWFSWLALAEWWYNTTYHTSIQMTPFQALYGY 1416

Query: 181  SPPHP---AFPSDVTTSIAAVEEYLKHRNGMLEIVKEGLHKAQERMKWYADKKRTERSFE 351
             PP     A P +++         L+ +  +L+ +K  + +AQ R+K+YADK R+ER+ E
Sbjct: 1417 PPPQITEFAIPCNMSEEARVT---LEDKALILQKLKSSIGEAQRRIKFYADKGRSERTLE 1473

Query: 352  LGDWVYLKLQPYRQTSVTIRKNLKLSAKFYGPFRVLAKVGAVAYKLELPTGSKIHPVFHV 531
            LGD VYLKLQPYRQ ++ IR +LKL +K+YGPF+V+ K+GAVAYKL+LP G+ IHPVFHV
Sbjct: 1474 LGDMVYLKLQPYRQVAMGIRGSLKLRSKYYGPFKVIEKMGAVAYKLQLPDGAGIHPVFHV 1533

Query: 532  SQLKKKLGTSVPPMPSLPMVDQSGQM 609
            SQLKK LG    PMP+LP +   GQ+
Sbjct: 1534 SQLKKHLGARAIPMPNLPAIGPDGQI 1559


>gb|ADB85304.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 335

 Score =  229 bits (585), Expect = 2e-58
 Identities = 114/206 (55%), Positives = 144/206 (69%), Gaps = 3/206 (1%)
 Frame = +1

Query: 1   HPQTDGQTERTNACLENYLRCMVSNKPTN*FKWLHLAE*WFNTNFHTSLKMSPFQALYGY 180
           HPQTD QTER N CLE YLR M   +P     WL LAE W+NT +HTSLK++PFQALYGY
Sbjct: 97  HPQTDRQTERVNQCLEAYLRSMTFQEPREWMNWLTLAEWWYNTTYHTSLKVTPFQALYGY 156

Query: 181 SPPHP---AFPSDVTTSIAAVEEYLKHRNGMLEIVKEGLHKAQERMKWYADKKRTERSFE 351
            PP     + P +V+       E    +  MLE +K  LH AQ+RMK YADK RTER F+
Sbjct: 157 PPPQVGELSIPCNVSEEARITVE---QKEQMLEQLKSNLHNAQDRMKHYADKSRTERQFQ 213

Query: 352 LGDWVYLKLQPYRQTSVTIRKNLKLSAKFYGPFRVLAKVGAVAYKLELPTGSKIHPVFHV 531
           +GD VYLK+QPYR T+  +R +LKL +KFYGPFRVL K+G VAY+L+LP  + IHPVFHV
Sbjct: 214 VGDMVYLKMQPYRLTAFGLRGSLKLRSKFYGPFRVLEKLGTVAYRLQLPEHTLIHPVFHV 273

Query: 532 SQLKKKLGTSVPPMPSLPMVDQSGQM 609
           +QLKK LG+   P+  LP+V ++G++
Sbjct: 274 NQLKKHLGSHAVPLTGLPLVGENGKI 299


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score =  229 bits (585), Expect = 2e-58
 Identities = 112/206 (54%), Positives = 147/206 (71%), Gaps = 3/206 (1%)
 Frame = +1

Query: 1    HPQTDGQTERTNACLENYLRCMVSNKPTN*FKWLHLAE*WFNTNFHTSLKMSPFQALYGY 180
            HPQTDGQTER N CLE+YLR M   +PT    WL LAE W+NT +HTS++M+PFQALYGY
Sbjct: 1332 HPQTDGQTERVNQCLESYLRSMTFQEPTRWHSWLALAEWWYNTTYHTSIQMTPFQALYGY 1391

Query: 181  SPPHP---AFPSDVTTSIAAVEEYLKHRNGMLEIVKEGLHKAQERMKWYADKKRTERSFE 351
             PP     + P +V+         ++ ++ +++ +K  L +AQ R+K YAD+ R+ER+  
Sbjct: 1392 PPPQINEFSVPCNVSEEARVT---IEQKDAIIQKLKYSLTEAQRRIKHYADRNRSERTLA 1448

Query: 352  LGDWVYLKLQPYRQTSVTIRKNLKLSAKFYGPFRVLAKVGAVAYKLELPTGSKIHPVFHV 531
            +GD VYLKLQPYRQT+  IR +LKL +KFYGPF+++ KVG VAYKL+LP GS IHPVFHV
Sbjct: 1449 VGDMVYLKLQPYRQTAFGIRGSLKLRSKFYGPFKIMEKVGRVAYKLQLPEGSNIHPVFHV 1508

Query: 532  SQLKKKLGTSVPPMPSLPMVDQSGQM 609
            SQLKK +G+   PM +LP V   GQ+
Sbjct: 1509 SQLKKHIGSRAVPMANLPSVGPDGQI 1534


>emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group]
          Length = 642

 Score =  228 bits (580), Expect = 9e-58
 Identities = 108/195 (55%), Positives = 144/195 (73%)
 Frame = +1

Query: 1   HPQTDGQTERTNACLENYLRCMVSNKPTN*FKWLHLAE*WFNTNFHTSLKMSPFQALYGY 180
           HPQ+D QTER N CLE YLRC V + PT    WLHLAE W+NT+FH+S++ +PF+ LYG+
Sbjct: 305 HPQSDAQTERVNQCLEIYLRCFVHSVPTKWAAWLHLAEYWYNTSFHSSVQATPFEVLYGH 364

Query: 181 SPPHPAFPSDVTTSIAAVEEYLKHRNGMLEIVKEGLHKAQERMKWYADKKRTERSFELGD 360
           SP H    S    +I  + ++LK R  M  +V++ LH+AQ++MK +ADKKR+ RSFE+GD
Sbjct: 365 SPSHFGIGSQ-DCAIPDLAQWLKERRLMQNLVQQHLHRAQQQMKHFADKKRSFRSFEVGD 423

Query: 361 WVYLKLQPYRQTSVTIRKNLKLSAKFYGPFRVLAKVGAVAYKLELPTGSKIHPVFHVSQL 540
           WVYLKLQPY QTSV +R N KL+ K++GP++V AK+G VAY+L+LP+ + IHPVFHVSQL
Sbjct: 424 WVYLKLQPYVQTSVAVRANHKLAFKYFGPYQVTAKIGTVAYQLQLPSSTSIHPVFHVSQL 483

Query: 541 KKKLGTSVPPMPSLP 585
           K  +G + P    LP
Sbjct: 484 KSAIGFTGPVQHQLP 498