BLASTX nr result

ID: Coptis21_contig00028763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028763
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526571.1| protein with unknown function [Ricinus commu...    87   2e-15
ref|XP_002321307.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_003541366.1| PREDICTED: uncharacterized protein LOC100776...    77   2e-12
ref|XP_002520172.1| protein with unknown function [Ricinus commu...    59   4e-07
ref|XP_002323355.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07

>ref|XP_002526571.1| protein with unknown function [Ricinus communis]
           gi|223534132|gb|EEF35849.1| protein with unknown
           function [Ricinus communis]
          Length = 804

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 51/135 (37%), Positives = 78/135 (57%), Gaps = 6/135 (4%)
 Frame = -2

Query: 391 QPEICF*DSE------MYQATMKEISPLVILQMENLILDGLLQLFKEYIYSLERAISSKA 230
           +PE C   +       + QA  K+++PL  LQME  IL GL  LF EYI  LE AI+   
Sbjct: 429 EPEYCLLTNSGRKFVTLLQAISKDVTPLAALQMEGSILAGLSDLFMEYITILEEAITCDV 488

Query: 229 DVSDRIGSRIVLAETHSQQLSVLANSSVLVQIVSNIARNIFKGFKVSDGQLLTDVEMVLL 50
           ++S++ G R++LAE+  QQ+S+LAN S L    SN  R+IF+G    D + +    +   
Sbjct: 489 NMSEKSGFRVILAESVPQQVSILANLSTLEIFFSNTVRSIFRGTNCIDSEKIKIHRVGFP 548

Query: 49  YKELDNWIFSIQDAA 5
            +E+D+ +  IQ+A+
Sbjct: 549 DQEVDSCVMFIQEAS 563


>ref|XP_002321307.1| predicted protein [Populus trichocarpa] gi|222862080|gb|EEE99622.1|
           predicted protein [Populus trichocarpa]
          Length = 897

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 50/135 (37%), Positives = 78/135 (57%), Gaps = 6/135 (4%)
 Frame = -2

Query: 391 QPEICF*DSE------MYQATMKEISPLVILQMENLILDGLLQLFKEYIYSLERAISSKA 230
           +PE C   S       + QA   +++PL+ LQ+E+ IL GL+ LF EYI  LERAI+SK 
Sbjct: 411 RPEYCLLTSSGRKFVTVLQAITGDVTPLIALQLEDSILRGLMNLFSEYIAILERAITSKT 470

Query: 229 DVSDRIGSRIVLAETHSQQLSVLANSSVLVQIVSNIARNIFKGFKVSDGQLLTDVEMVLL 50
           +      S I+LAET  QQ+S+LAN S L  + S+   ++F      D +L+ +  +   
Sbjct: 471 N-----DSGIILAETVPQQVSILANLSTLENLFSSTILSVFGSNNPIDSRLMKNQSVGFH 525

Query: 49  YKELDNWIFSIQDAA 5
            +EL++ +  +QDA+
Sbjct: 526 QQELESRVLFVQDAS 540


>ref|XP_003541366.1| PREDICTED: uncharacterized protein LOC100776739 [Glycine max]
          Length = 870

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 43/120 (35%), Positives = 77/120 (64%)
 Frame = -2

Query: 361 MYQATMKEISPLVILQMENLILDGLLQLFKEYIYSLERAISSKADVSDRIGSRIVLAETH 182
           + QA +++IS LV L M +L++ G+  LF EYI  LE+A++ +A  +++   RI LAE+ 
Sbjct: 434 LLQAIVEDISSLVSLHMGSLVISGITILFTEYIVILEKALTYEASSTEQGSPRIKLAESL 493

Query: 181 SQQLSVLANSSVLVQIVSNIARNIFKGFKVSDGQLLTDVEMVLLYKELDNWIFSIQDAAD 2
            QQ+S+LAN S LVQ +S + ++IF      + Q+L +  +V   + LD+++  I++ ++
Sbjct: 494 PQQVSILANLSTLVQFLSIMVKDIFSSSDHIEFQVLENYSIVHQQQGLDDFLLFIEEGSN 553


>ref|XP_002520172.1| protein with unknown function [Ricinus communis]
           gi|223540664|gb|EEF42227.1| protein with unknown
           function [Ricinus communis]
          Length = 774

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/79 (40%), Positives = 54/79 (68%), Gaps = 4/79 (5%)
 Frame = -2

Query: 367 SEMYQATMKEISPLVILQMENLILDGLLQLFKEYIYSLERAISSKADVSDRI---GSRIV 197
           + M Q  +++++PL ILQ++   L+G+LQ+F  Y+  L RA+    +  D +   GS+IV
Sbjct: 446 NSMVQEILEDVAPLEILQLDGPALEGVLQVFSAYVNLLIRALPGSMENEDNMEASGSKIV 505

Query: 196 -LAETHSQQLSVLANSSVL 143
            +AET SQQ+++LAN+S+L
Sbjct: 506 RMAETESQQIALLANASLL 524


>ref|XP_002323355.1| predicted protein [Populus trichocarpa] gi|222867985|gb|EEF05116.1|
           predicted protein [Populus trichocarpa]
          Length = 765

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
 Frame = -2

Query: 367 SEMYQATMKEISPLVILQMENLILDGLLQLFKEYIYSLERAISSKADVSDRI---GSRIV 197
           + M Q  +++  PL  LQ++   L G+LQ+F  Y+  L RA+ S A+  + +   GS+IV
Sbjct: 425 NSMIQDFLEDAGPLESLQLDGSALGGVLQVFNSYVNLLMRALPSSAETEESLEGSGSKIV 484

Query: 196 -LAETHSQQLSVLANSSVL 143
            +AET SQQL++LAN+S+L
Sbjct: 485 RIAETESQQLALLANASLL 503


Top