BLASTX nr result

ID: Coptis21_contig00028568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028568
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002323541.1| predicted protein [Populus trichocarpa] gi|222868171|gb|EEF05302.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/75 (41%), Positives = 41/75 (54%)
 Frame = -3

Query: 226 PLDQSAFDSVFSGCINLECLTLQDCSLPESLFICGNLLCLKSLVLKRCDGPKEIEVSSIY 47
           PLDQS  D + S C  L  L +  C LP+ + I G LLCLK+L++   D    +E+ SI 
Sbjct: 172 PLDQSGLDIITSACPKLTLLRMIGCGLPKIVCIHGQLLCLKTLIIH--DSLISVELKSIN 229

Query: 46  LTTFEYMGVITNLRF 2
           L  FE+ G    L F
Sbjct: 230 LEIFEFFGHPRKLTF 244


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