BLASTX nr result
ID: Coptis21_contig00028498
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00028498 (241 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003559681.1| PREDICTED: serpin-ZX-like [Brachypodium dist... 83 3e-14 ref|XP_002466824.1| hypothetical protein SORBIDRAFT_01g014740 [S... 81 8e-14 ref|XP_002466823.1| hypothetical protein SORBIDRAFT_01g014730 [S... 80 2e-13 ref|NP_175202.1| serpin-ZX [Arabidopsis thaliana] gi|75313047|sp... 77 1e-12 pdb|3LE2|A Chain A, Structure Of Arabidopsis Atserpin1. Native S... 77 1e-12 >ref|XP_003559681.1| PREDICTED: serpin-ZX-like [Brachypodium distachyon] Length = 403 Score = 82.8 bits (203), Expect = 3e-14 Identities = 45/82 (54%), Positives = 58/82 (70%), Gaps = 3/82 (3%) Frame = +3 Query: 3 SDPLFLEKYVSLYPSVVDVREFMIPKFKMTFYVEASEILRGVGLKLPFSGKAELDEMV-- 176 S P FLEKY L V V + +PKFK+TF EAS++L+G+GL+LPFS +A+ EMV Sbjct: 267 SKPGFLEKY--LPTQKVPVGQLKLPKFKITFGFEASDVLKGLGLQLPFSAQADFSEMVDS 324 Query: 177 -LGDRLCVSNVHHKSHIEVNEE 239 +G LCVS+V HKS +EVNEE Sbjct: 325 PVGQNLCVSSVFHKSFVEVNEE 346 >ref|XP_002466824.1| hypothetical protein SORBIDRAFT_01g014740 [Sorghum bicolor] gi|241920678|gb|EER93822.1| hypothetical protein SORBIDRAFT_01g014740 [Sorghum bicolor] Length = 468 Score = 81.3 bits (199), Expect = 8e-14 Identities = 42/82 (51%), Positives = 61/82 (74%), Gaps = 3/82 (3%) Frame = +3 Query: 3 SDPLFLEKYVSLYPSVVDVREFMIPKFKMTFYVEASEILRGVGLKLPFSGKAELDEMV-- 176 S+P FL+KY+ + V V +F +PKFK++F EAS++L+G+GL+LPFS +A+L E+V Sbjct: 335 SEPEFLDKYIPMQK--VPVGQFKVPKFKISFGFEASKLLKGLGLQLPFSAQADLSELVDS 392 Query: 177 -LGDRLCVSNVHHKSHIEVNEE 239 G L VS+V+HKS +EVNEE Sbjct: 393 PEGQNLSVSSVYHKSFVEVNEE 414 >ref|XP_002466823.1| hypothetical protein SORBIDRAFT_01g014730 [Sorghum bicolor] gi|241920677|gb|EER93821.1| hypothetical protein SORBIDRAFT_01g014730 [Sorghum bicolor] Length = 398 Score = 80.1 bits (196), Expect = 2e-13 Identities = 40/82 (48%), Positives = 60/82 (73%), Gaps = 3/82 (3%) Frame = +3 Query: 3 SDPLFLEKYVSLYPSVVDVREFMIPKFKMTFYVEASEILRGVGLKLPFSGKAELDEMV-- 176 S+P F+E+++ V V +F +PKFK++F EAS++L+G+GL+LPFS +A+L E+V Sbjct: 265 SEPEFMEEHIPTRK--VPVGQFKVPKFKVSFGFEASDLLKGLGLELPFSSQADLSELVHL 322 Query: 177 -LGDRLCVSNVHHKSHIEVNEE 239 G LCVS++ HKS +EVNEE Sbjct: 323 PAGQNLCVSSIFHKSFVEVNEE 344 >ref|NP_175202.1| serpin-ZX [Arabidopsis thaliana] gi|75313047|sp|Q9S7T8.1|SPZX_ARATH RecName: Full=Serpin-ZX; AltName: Full=ArathZx; AltName: Full=AtSerpin1; AltName: Full=Serpin-1 gi|5668792|gb|AAD46018.1|AC007519_3 Strong similarity to gb|Z15116 serpin (pazx) from Hordeum vulgare and is a member of the PF|00079 Serpin family. ESTs gb|R65473, gb|N38150 and gb|AA712968 come from this gene [Arabidopsis thaliana] gi|9802595|gb|AAF99797.1|AC012463_14 T2E6.22 [Arabidopsis thaliana] gi|27311755|gb|AAO00843.1| serpin, putative [Arabidopsis thaliana] gi|30725636|gb|AAP37840.1| At1g47710 [Arabidopsis thaliana] gi|332194082|gb|AEE32203.1| serpin-ZX [Arabidopsis thaliana] Length = 391 Score = 77.0 bits (188), Expect = 1e-12 Identities = 43/83 (51%), Positives = 55/83 (66%), Gaps = 4/83 (4%) Frame = +3 Query: 3 SDPLFLEKYVSLYPSVVDVREFMIPKFKMTFYVEASEILRGVGLKLPFSGKAELDEMV-- 176 S P FL+ ++ V VREF IPKFK +F +AS +L+G+GL PFSG+ L EMV Sbjct: 256 STPGFLDNHIPRRQ--VKVREFKIPKFKFSFGFDASNVLKGLGLTSPFSGEEGLTEMVES 313 Query: 177 --LGDRLCVSNVHHKSHIEVNEE 239 +G LCVSN+ HK+ IEVNEE Sbjct: 314 PEMGKNLCVSNIFHKACIEVNEE 336 >pdb|3LE2|A Chain A, Structure Of Arabidopsis Atserpin1. Native Stressed Conforma Length = 393 Score = 77.0 bits (188), Expect = 1e-12 Identities = 43/83 (51%), Positives = 55/83 (66%), Gaps = 4/83 (4%) Frame = +3 Query: 3 SDPLFLEKYVSLYPSVVDVREFMIPKFKMTFYVEASEILRGVGLKLPFSGKAELDEMV-- 176 S P FL+ ++ V VREF IPKFK +F +AS +L+G+GL PFSG+ L EMV Sbjct: 258 STPGFLDNHIPRRQ--VKVREFKIPKFKFSFGFDASNVLKGLGLTSPFSGEEGLTEMVES 315 Query: 177 --LGDRLCVSNVHHKSHIEVNEE 239 +G LCVSN+ HK+ IEVNEE Sbjct: 316 PEMGKNLCVSNIFHKACIEVNEE 338