BLASTX nr result

ID: Coptis21_contig00028492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028492
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522113.1| PREDICTED: uncharacterized protein LOC100796...    80   2e-13
ref|XP_003537359.1| PREDICTED: uncharacterized protein LOC100786...    80   2e-13
ref|XP_003544056.1| PREDICTED: uncharacterized protein LOC100810...    79   4e-13
ref|XP_003555102.1| PREDICTED: uncharacterized protein LOC100796...    79   5e-13
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...    76   3e-12

>ref|XP_003522113.1| PREDICTED: uncharacterized protein LOC100796705 [Glycine max]
          Length = 1010

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
 Frame = +3

Query: 3   DTVMCTVVPMDVCHLLLGRPWQFDHRSIHDGAKNTHSFLHNGRKLILEPLKPPDI---ET 173
           D V+C VVPM+  HLLLGRPWQFD R+ HDG  N  SF+H  +K++L+PL P ++   + 
Sbjct: 422 DKVLCDVVPMEASHLLLGRPWQFDKRANHDGYTNKISFMHQDKKIVLKPLSPQEVCEDQK 481

Query: 174 TMCTKFLAEARESGMFFSLTSHEKK 248
            M  K   E RE          EKK
Sbjct: 482 KMREKLFQEKREKEKVSKTLESEKK 506


>ref|XP_003537359.1| PREDICTED: uncharacterized protein LOC100786304 [Glycine max]
          Length = 1317

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
 Frame = +3

Query: 3    DTVMCTVVPMDVCHLLLGRPWQFDHRSIHDGAKNTHSFLHNGRKLILEPLKPPDI---ET 173
            D V+C VVPM+  H+LLGRPWQFD R  HDG  N  SF+H  +K++L+PL P ++   + 
Sbjct: 780  DKVLCDVVPMEASHILLGRPWQFDKRVNHDGYTNKISFMHQDKKIVLKPLSPQEVCEDQK 839

Query: 174  TMCTKFLAEARESGMFFSLTSHEKK 248
             M  K L E RE          EKK
Sbjct: 840  KMREKLLQEKREKEKVSKTLESEKK 864


>ref|XP_003544056.1| PREDICTED: uncharacterized protein LOC100810263 [Glycine max]
          Length = 1150

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
 Frame = +3

Query: 3   DTVMCTVVPMDVCHLLLGRPWQFDHRSIHDGAKNTHSFLHNGRKLILEPLKPPDI---ET 173
           D V+C VVPM+  HLLLGRPWQFD R+ HD   N  SF+H  +K++L+PL P ++   + 
Sbjct: 421 DKVLCDVVPMEASHLLLGRPWQFDKRANHDDYTNKISFMHQDKKIVLKPLSPQEVCEDQK 480

Query: 174 TMCTKFLAEARESGMFFSLTSHEKK 248
            M  K L E RE          EKK
Sbjct: 481 KMREKLLQEKREKEKVSKTLESEKK 505


>ref|XP_003555102.1| PREDICTED: uncharacterized protein LOC100796026 [Glycine max]
          Length = 1109

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
 Frame = +3

Query: 3   DTVMCTVVPMDVCHLLLGRPWQFDHRSIHDGAKNTHSFLHNGRKLILEPLKPPDI---ET 173
           D V+C VVPM+  H+LLGRPWQFD R+ HDG  N  S +H  +K++L+PL P ++   + 
Sbjct: 421 DKVLCDVVPMEASHILLGRPWQFDKRANHDGYTNKISIMHQDKKIVLKPLSPQEVCEDQK 480

Query: 174 TMCTKFLAEARESGMFFSLTSHEKK 248
            M  K L E RE          EKK
Sbjct: 481 KMREKLLQEKREKEKVSKTLESEKK 505


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 30/55 (54%), Positives = 38/55 (69%)
 Frame = +3

Query: 3   DTVMCTVVPMDVCHLLLGRPWQFDHRSIHDGAKNTHSFLHNGRKLILEPLKPPDI 167
           D ++C VVPM  CH+LLGRPWQ+D  + H G KN +S LHNG+K  L PL P  +
Sbjct: 494 DEILCDVVPMQACHVLLGRPWQYDRDTTHHGRKNRYSLLHNGKKYTLAPLSPSQV 548


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