BLASTX nr result

ID: Coptis21_contig00028487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028487
         (1348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40924.3| unnamed protein product [Vitis vinifera]              544   e-152
ref|XP_002524359.1| RNA binding protein, putative [Ricinus commu...   520   e-145
ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|2...   511   e-142
ref|XP_004163683.1| PREDICTED: uncharacterized LOC101213211 [Cuc...   507   e-141
ref|XP_004147263.1| PREDICTED: uncharacterized protein LOC101213...   507   e-141

>emb|CBI40924.3| unnamed protein product [Vitis vinifera]
          Length = 1203

 Score =  544 bits (1401), Expect = e-152
 Identities = 282/390 (72%), Positives = 323/390 (82%), Gaps = 8/390 (2%)
 Frame = +1

Query: 1    VIVHTTEEIVRFRHLNELLPPITPLLTSHHHSLRGFAQLLVYQVLSKMFPALDCDGSHIL 180
            VI+H  E  VRFRHL+ELLPPI PLLTSHHHSLRGF QLLVYQ+  K+FP +D   S IL
Sbjct: 810  VILHAPEA-VRFRHLDELLPPIIPLLTSHHHSLRGFTQLLVYQIFFKLFP-VDSGVSEIL 867

Query: 181  SLETRCFKDLKSYLAKNSDCARLRASMQGFLNAFDPIAFATPNGIFTARDEGFEFECVPT 360
             LE RCFKDLKSYL KN+DC RLR SM GFL+AFDP    TP+GIFT R E  EFECVPT
Sbjct: 868  PLEKRCFKDLKSYLEKNTDCIRLRKSMAGFLDAFDPNNSVTPSGIFTDRVEELEFECVPT 927

Query: 361  SLMEQVNLFLNEVREDLRCSMAKDMVTIKNESLIIGDNFNDMNASTTANKETLPSQVPKE 540
            SLME V  FLN+VREDLRC+MAKDMVTIKNE L + ++ N    S   NKE L + +PK+
Sbjct: 928  SLMEHVVTFLNDVREDLRCAMAKDMVTIKNERLCVDEDSNCTEISVDTNKEKLLTLMPKD 987

Query: 541  ISLDFQKKITLSNHERHY--------DDVTGEPLAELEKEDQLLNQVLQARCLIAEKMRA 696
            IS+DFQKKITL  HE+           + T +PL E+EKEDQLL+Q+LQ+R +  E++R+
Sbjct: 988  ISVDFQKKITLGKHEKQDTSSRSFLDSNETCKPLLEIEKEDQLLDQLLQSRSVAMERIRS 1047

Query: 697  SRQDFILVASLLDRIPNLAGLARTCEVFKAAGLAVADASIVNDKQFQLISVTAEKWVPLI 876
            S+Q FILVASL+DRIPNLAGLARTCEVFKAAGLA+AD +I++DKQFQLISVTAEKWVP++
Sbjct: 1048 SQQHFILVASLIDRIPNLAGLARTCEVFKAAGLAIADTNILHDKQFQLISVTAEKWVPIV 1107

Query: 877  EVPVSTIKVFLRKKKQEGYSILGLEQTANSVPLDQYAFPKKMVLVLGREKEGIPVDIIHI 1056
            EVPVS++KVFL KKKQEG+SILGLEQTANSVPLD+Y FPKK+VLVLGREKEGIPVDIIHI
Sbjct: 1108 EVPVSSVKVFLEKKKQEGFSILGLEQTANSVPLDKYIFPKKIVLVLGREKEGIPVDIIHI 1167

Query: 1057 LDACIEIPQLGVVRSLNVHVSGAIALWEYT 1146
            LDACIEIPQLGVVRSLNVHVSGAIALWEYT
Sbjct: 1168 LDACIEIPQLGVVRSLNVHVSGAIALWEYT 1197


>ref|XP_002524359.1| RNA binding protein, putative [Ricinus communis]
            gi|223536320|gb|EEF37970.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 1744

 Score =  520 bits (1339), Expect = e-145
 Identities = 270/389 (69%), Positives = 314/389 (80%), Gaps = 7/389 (1%)
 Frame = +1

Query: 1    VIVHTTEEIVRFRHLNELLPPITPLLTSHHHSLRGFAQLLVYQVLSKMFPALDCDGSHIL 180
            +I+HT++   + RHL+ELLPPI PLLTSHHHSLRGF QLLVYQVLSK+   LDC  S   
Sbjct: 1359 IILHTSKAF-QSRHLDELLPPILPLLTSHHHSLRGFTQLLVYQVLSKILSPLDCGASETT 1417

Query: 181  SLETRCFKDLKSYLAKNSDCARLRASMQGFLNAFDPIAFATPNGIFTARDEGFEFECVPT 360
             LE RCF+DLKSYLAKN DC RLRASM+G+L+A++PI   TP GIF  R E  EFECVPT
Sbjct: 1418 DLEKRCFEDLKSYLAKNPDCRRLRASMEGYLDAYNPIVSGTPTGIFINRVEELEFECVPT 1477

Query: 361  SLMEQVNLFLNEVREDLRCSMAKDMVTIKNESLIIGDNFNDMNASTTANKETLPSQVPKE 540
            SL+E+V  FLN+VREDLRCSMAKD++TIKNES  I +N           + TLP ++ +E
Sbjct: 1478 SLLEEVLSFLNDVREDLRCSMAKDVITIKNESFKIDEN--------PTCRRTLPKELLEE 1529

Query: 541  ISLDFQKKITLSNHERHYDDVTG-------EPLAELEKEDQLLNQVLQARCLIAEKMRAS 699
             SLDFQKKIT S HE+   D +        + L E+EKED+LL+Q LQ+R L  E++RAS
Sbjct: 1530 ASLDFQKKITPSKHEKKDADSSSILGSNAYKQLLEMEKEDELLDQSLQSRILTMERIRAS 1589

Query: 700  RQDFILVASLLDRIPNLAGLARTCEVFKAAGLAVADASIVNDKQFQLISVTAEKWVPLIE 879
            RQ  ILVAS LDR+PNLAGLARTCEVF+A+GLA+AD SI++DKQFQLISVTAEKWVP+IE
Sbjct: 1590 RQHLILVASFLDRVPNLAGLARTCEVFRASGLAIADKSILHDKQFQLISVTAEKWVPIIE 1649

Query: 880  VPVSTIKVFLRKKKQEGYSILGLEQTANSVPLDQYAFPKKMVLVLGREKEGIPVDIIHIL 1059
            VPV+++K FL KKKQEGYSILGLEQTANSV LDQ+AFPKK VLVLGREKEG+PVDIIHIL
Sbjct: 1650 VPVNSVKQFLEKKKQEGYSILGLEQTANSVSLDQFAFPKKTVLVLGREKEGVPVDIIHIL 1709

Query: 1060 DACIEIPQLGVVRSLNVHVSGAIALWEYT 1146
            DACIEIPQLGVVRSLNVHVSGAIALWEYT
Sbjct: 1710 DACIEIPQLGVVRSLNVHVSGAIALWEYT 1738


>ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|222833998|gb|EEE72475.1|
            predicted protein [Populus trichocarpa]
          Length = 1224

 Score =  511 bits (1317), Expect = e-142
 Identities = 271/390 (69%), Positives = 311/390 (79%), Gaps = 8/390 (2%)
 Frame = +1

Query: 1    VIVHTTEEIVRFRHLNELLPPITPLLTSHHHSLRGFAQLLVYQVLSKMFPALDCDGSHIL 180
            VI+H +    + RH NELLPPI PLLTSHHHSLRGF QLLVYQV  K FP LD   S  +
Sbjct: 838  VILHASNAN-QSRHFNELLPPIIPLLTSHHHSLRGFTQLLVYQVFCKYFPMLDYGASE-M 895

Query: 181  SLETRCFKDLKSYLAKNSDCARLRASMQGFLNAFDPIAFATPNGIFTARDEGFEFECVPT 360
             LE  CF+DLKSYLAKN DC RLRAS++G+L+A++PIA  TP GIF  R E   FECVPT
Sbjct: 896  PLEKMCFEDLKSYLAKNPDCRRLRASLEGYLDAYNPIASGTPAGIFIDRVEELGFECVPT 955

Query: 361  SLMEQVNLFLNEVREDLRCSMAKDMVTIKNESLIIGDNFNDMNASTTANKETLPSQVPKE 540
            SLME+V  FLN+VREDLRCSMAKD+VTIKNESL   ++ N         +  + SQ+PKE
Sbjct: 956  SLMEEVLNFLNDVREDLRCSMAKDVVTIKNESLKTDEDGN-------CRRTVIDSQLPKE 1008

Query: 541  ISLDFQKKITLSNHERHYDDVTG--------EPLAELEKEDQLLNQVLQARCLIAEKMRA 696
             S DFQKK+TLS HE+   D +         + L E+EKED+LL+Q LQ+R L  EK+RA
Sbjct: 1009 TSFDFQKKLTLSKHEKQDTDSSSVLGNNEACKQLLEMEKEDELLDQSLQSRRLTMEKIRA 1068

Query: 697  SRQDFILVASLLDRIPNLAGLARTCEVFKAAGLAVADASIVNDKQFQLISVTAEKWVPLI 876
            SRQ FILVASLLDRIPNLAGLARTCEVFK +GLA+ADASI+ DKQFQLISVTAEKWVP+I
Sbjct: 1069 SRQQFILVASLLDRIPNLAGLARTCEVFKVSGLAIADASILRDKQFQLISVTAEKWVPII 1128

Query: 877  EVPVSTIKVFLRKKKQEGYSILGLEQTANSVPLDQYAFPKKMVLVLGREKEGIPVDIIHI 1056
            EVPV+++K FL KKK++G+SILGLEQTANSVPLD +AFPKK VLVLGREKEGIPVDIIH+
Sbjct: 1129 EVPVNSVKHFLEKKKRDGFSILGLEQTANSVPLDHHAFPKKTVLVLGREKEGIPVDIIHM 1188

Query: 1057 LDACIEIPQLGVVRSLNVHVSGAIALWEYT 1146
            LDACIEIPQLGVVRSLNVHVSGAIALWEYT
Sbjct: 1189 LDACIEIPQLGVVRSLNVHVSGAIALWEYT 1218


>ref|XP_004163683.1| PREDICTED: uncharacterized LOC101213211 [Cucumis sativus]
          Length = 1833

 Score =  507 bits (1305), Expect = e-141
 Identities = 261/390 (66%), Positives = 312/390 (80%), Gaps = 8/390 (2%)
 Frame = +1

Query: 1    VIVHTTEEIVRFRHLNELLPPITPLLTSHHHSLRGFAQLLVYQVLSKMFPALDCDGSHIL 180
            VI+H  E+ V+  HL+ELLP + P LTSHHHSLRGF QLLVY VL K FPA+    +  +
Sbjct: 1441 VILHANED-VQSSHLDELLPSLVPQLTSHHHSLRGFTQLLVYHVLCKFFPAMKFRPTGYM 1499

Query: 181  SLETRCFKDLKSYLAKNSDCARLRASMQGFLNAFDPIAFATPNGIFTARDEGFEFECVPT 360
             LE RCF+DLKSYL KN DC RLRASM+G+L+A++P++  TP+GIF++R +   FECVPT
Sbjct: 1500 PLEKRCFEDLKSYLEKNPDCVRLRASMEGYLHAYNPVSSVTPSGIFSSRVKDL-FECVPT 1558

Query: 361  SLMEQVNLFLNEVREDLRCSMAKDMVTIKNESLIIGDNFNDMNASTTANKETLPSQVPKE 540
            SLMEQV  FLN+VREDLRCSMA D+  IKNES    +  N +  S+  N+E   S++P  
Sbjct: 1559 SLMEQVLNFLNDVREDLRCSMANDLTAIKNESFKTNEGHNLIGISSDINEENSTSKLPVA 1618

Query: 541  ISLDFQKKITLSNHERHYDDVTG--------EPLAELEKEDQLLNQVLQARCLIAEKMRA 696
             SLDFQKK+TLS HE+   + +         + L ELE EDQLLNQ+L +R L  E +R 
Sbjct: 1619 TSLDFQKKVTLSKHEKKDTETSSYLGSKEAYKFLHELEGEDQLLNQLLHSRSLSMENLRT 1678

Query: 697  SRQDFILVASLLDRIPNLAGLARTCEVFKAAGLAVADASIVNDKQFQLISVTAEKWVPLI 876
            +RQD ILVASLLDRIPNLAGLARTCEVFKA+GLA+AD +++NDKQFQLISVTAEKWVP++
Sbjct: 1679 NRQDIILVASLLDRIPNLAGLARTCEVFKASGLAIADLNVLNDKQFQLISVTAEKWVPIV 1738

Query: 877  EVPVSTIKVFLRKKKQEGYSILGLEQTANSVPLDQYAFPKKMVLVLGREKEGIPVDIIHI 1056
            EVPV+++K+FL KKK+EG+SILGLEQTANSVPLDQYAFPKK VLVLGREKEGIPVDIIHI
Sbjct: 1739 EVPVNSMKLFLEKKKREGFSILGLEQTANSVPLDQYAFPKKTVLVLGREKEGIPVDIIHI 1798

Query: 1057 LDACIEIPQLGVVRSLNVHVSGAIALWEYT 1146
            LDAC+EIPQLGVVRSLNVHVSGAIALWEYT
Sbjct: 1799 LDACVEIPQLGVVRSLNVHVSGAIALWEYT 1828


>ref|XP_004147263.1| PREDICTED: uncharacterized protein LOC101213211 [Cucumis sativus]
          Length = 1833

 Score =  507 bits (1305), Expect = e-141
 Identities = 261/390 (66%), Positives = 312/390 (80%), Gaps = 8/390 (2%)
 Frame = +1

Query: 1    VIVHTTEEIVRFRHLNELLPPITPLLTSHHHSLRGFAQLLVYQVLSKMFPALDCDGSHIL 180
            VI+H  E+ V+  HL+ELLP + P LTSHHHSLRGF QLLVY VL K FPA+    +  +
Sbjct: 1441 VILHANED-VQSSHLDELLPSLVPQLTSHHHSLRGFTQLLVYHVLCKFFPAMKFRPTGYM 1499

Query: 181  SLETRCFKDLKSYLAKNSDCARLRASMQGFLNAFDPIAFATPNGIFTARDEGFEFECVPT 360
             LE RCF+DLKSYL KN DC RLRASM+G+L+A++P++  TP+GIF++R +   FECVPT
Sbjct: 1500 PLEKRCFEDLKSYLEKNPDCVRLRASMEGYLHAYNPVSSVTPSGIFSSRVKDL-FECVPT 1558

Query: 361  SLMEQVNLFLNEVREDLRCSMAKDMVTIKNESLIIGDNFNDMNASTTANKETLPSQVPKE 540
            SLMEQV  FLN+VREDLRCSMA D+  IKNES    +  N +  S+  N+E   S++P  
Sbjct: 1559 SLMEQVLNFLNDVREDLRCSMANDLTAIKNESFKTNEGHNLIGISSDINEENSTSKLPVA 1618

Query: 541  ISLDFQKKITLSNHERHYDDVTG--------EPLAELEKEDQLLNQVLQARCLIAEKMRA 696
             SLDFQKK+TLS HE+   + +         + L ELE EDQLLNQ+L +R L  E +R 
Sbjct: 1619 TSLDFQKKVTLSKHEKKDTETSSYLGSKEAYKFLHELEGEDQLLNQLLHSRSLSMENLRT 1678

Query: 697  SRQDFILVASLLDRIPNLAGLARTCEVFKAAGLAVADASIVNDKQFQLISVTAEKWVPLI 876
            +RQD ILVASLLDRIPNLAGLARTCEVFKA+GLA+AD +++NDKQFQLISVTAEKWVP++
Sbjct: 1679 NRQDIILVASLLDRIPNLAGLARTCEVFKASGLAIADLNVLNDKQFQLISVTAEKWVPIV 1738

Query: 877  EVPVSTIKVFLRKKKQEGYSILGLEQTANSVPLDQYAFPKKMVLVLGREKEGIPVDIIHI 1056
            EVPV+++K+FL KKK+EG+SILGLEQTANSVPLDQYAFPKK VLVLGREKEGIPVDIIHI
Sbjct: 1739 EVPVNSMKLFLEKKKREGFSILGLEQTANSVPLDQYAFPKKTVLVLGREKEGIPVDIIHI 1798

Query: 1057 LDACIEIPQLGVVRSLNVHVSGAIALWEYT 1146
            LDAC+EIPQLGVVRSLNVHVSGAIALWEYT
Sbjct: 1799 LDACVEIPQLGVVRSLNVHVSGAIALWEYT 1828


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