BLASTX nr result

ID: Coptis21_contig00028486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028486
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316217.1| predicted protein [Populus trichocarpa] gi|2...   246   2e-63
emb|CAN76747.1| hypothetical protein VITISV_011445 [Vitis vinifera]   241   3e-62
emb|CBI40843.3| unnamed protein product [Vitis vinifera]              235   3e-60
ref|XP_002267851.2| PREDICTED: elongator complex protein 4-like ...   232   2e-59
ref|XP_004143437.1| PREDICTED: elongator complex protein 4-like ...   230   1e-58

>ref|XP_002316217.1| predicted protein [Populus trichocarpa] gi|222865257|gb|EEF02388.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  246 bits (627), Expect = 2e-63
 Identities = 114/152 (75%), Positives = 132/152 (86%)
 Frame = +2

Query: 2   SSFSRNLADSRLPQIPGVKHGPNATSFVSTGIPDLDKILGGGFHLGSLVMVMEDGEAPHH 181
           SSFSRN++    PQ+PG+K GPN T FVS+GIPDLDKILGGGF LGSLVM+MED EAPHH
Sbjct: 9   SSFSRNISAVSAPQLPGIKCGPNGTFFVSSGIPDLDKILGGGFPLGSLVMIMEDAEAPHH 68

Query: 182 LLLLRNFMSQGLVHNQPLLYASPSNDPKSFLGTLPSPVSPKDDKSRGHETEQEKGLRIAW 361
           +LLLRNFMSQGLV NQPLLYASP+ DP+ FLGTLP P S KDDKSR H+TEQEKGLRIAW
Sbjct: 69  MLLLRNFMSQGLVQNQPLLYASPAKDPRGFLGTLPCPSSSKDDKSRNHDTEQEKGLRIAW 128

Query: 362 QYRKYFGENQLNNENNKDAKKEYCNEFDLRKP 457
           QY+KYF ENQ N +++KD+ +E+CN+FDLRKP
Sbjct: 129 QYKKYFSENQKNIDDHKDSNQEFCNDFDLRKP 160


>emb|CAN76747.1| hypothetical protein VITISV_011445 [Vitis vinifera]
          Length = 363

 Score =  241 bits (616), Expect = 3e-62
 Identities = 114/152 (75%), Positives = 131/152 (86%)
 Frame = +2

Query: 2   SSFSRNLADSRLPQIPGVKHGPNATSFVSTGIPDLDKILGGGFHLGSLVMVMEDGEAPHH 181
           SSFSRN + +  PQ PG+K GPN T F+S+GIPDLDKILGGGF LGSLVMVMED EAPHH
Sbjct: 9   SSFSRNTSVAPAPQAPGLKSGPNGTIFLSSGIPDLDKILGGGFPLGSLVMVMEDTEAPHH 68

Query: 182 LLLLRNFMSQGLVHNQPLLYASPSNDPKSFLGTLPSPVSPKDDKSRGHETEQEKGLRIAW 361
           +LLLRNFMSQGLVHNQPLLYASPS DP++FLGTLPSPV  KDD+S   + EQEKGLRIAW
Sbjct: 69  MLLLRNFMSQGLVHNQPLLYASPSKDPRAFLGTLPSPVLSKDDRSHNRDPEQEKGLRIAW 128

Query: 362 QYRKYFGENQLNNENNKDAKKEYCNEFDLRKP 457
           QY+KYFGE+Q N ++++D K EYCN+FDLRKP
Sbjct: 129 QYKKYFGEHQPNFDSHRDTKHEYCNDFDLRKP 160


>emb|CBI40843.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  235 bits (599), Expect = 3e-60
 Identities = 113/154 (73%), Positives = 131/154 (85%), Gaps = 2/154 (1%)
 Frame = +2

Query: 2   SSFSRNLADSRLPQIPGVKHGPNATSFVSTGIPDLDKILGGGFHLGSLVMVMEDGEAPHH 181
           SSFSRN + +  PQ PG+K GPN T F+S+GIPDLDKILGGGF LGSLVMVMED EAPHH
Sbjct: 6   SSFSRNTSVAPAPQAPGLKSGPNGTIFLSSGIPDLDKILGGGFPLGSLVMVMEDTEAPHH 65

Query: 182 LLLLRNFMSQGLVHNQPLLYASPSNDPKSFLGTLPSPVSPKDDKSRGHETE--QEKGLRI 355
           +LLLRNFMSQGLVHNQPLLYASPS DP++FLGTLPSPV  KDD+S   + E  QEKGLRI
Sbjct: 66  MLLLRNFMSQGLVHNQPLLYASPSKDPRAFLGTLPSPVLSKDDRSHNRDPEQLQEKGLRI 125

Query: 356 AWQYRKYFGENQLNNENNKDAKKEYCNEFDLRKP 457
           AWQY+KYFGE++ N ++++D K EYCN+FDLRKP
Sbjct: 126 AWQYKKYFGEHRPNFDSHRDTKHEYCNDFDLRKP 159


>ref|XP_002267851.2| PREDICTED: elongator complex protein 4-like [Vitis vinifera]
          Length = 361

 Score =  232 bits (592), Expect = 2e-59
 Identities = 111/152 (73%), Positives = 130/152 (85%)
 Frame = +2

Query: 2   SSFSRNLADSRLPQIPGVKHGPNATSFVSTGIPDLDKILGGGFHLGSLVMVMEDGEAPHH 181
           SSFSRN + +  PQ PG+K GPN T F+S+GIPDLDKILGGGF LGSLVMVMED EAPHH
Sbjct: 9   SSFSRNTSVAPAPQAPGLKSGPNGTIFLSSGIPDLDKILGGGFPLGSLVMVMEDTEAPHH 68

Query: 182 LLLLRNFMSQGLVHNQPLLYASPSNDPKSFLGTLPSPVSPKDDKSRGHETEQEKGLRIAW 361
           +LLLRNFMSQGLVHNQPLLYASPS DP++FLGTLPSPV  KDD+S  H  + E+GLRIAW
Sbjct: 69  MLLLRNFMSQGLVHNQPLLYASPSKDPRAFLGTLPSPVLSKDDRS--HNRDPEQGLRIAW 126

Query: 362 QYRKYFGENQLNNENNKDAKKEYCNEFDLRKP 457
           QY+KYFGE++ N ++++D K EYCN+FDLRKP
Sbjct: 127 QYKKYFGEHRPNFDSHRDTKHEYCNDFDLRKP 158


>ref|XP_004143437.1| PREDICTED: elongator complex protein 4-like [Cucumis sativus]
           gi|449496395|ref|XP_004160123.1| PREDICTED: elongator
           complex protein 4-like [Cucumis sativus]
          Length = 362

 Score =  230 bits (586), Expect = 1e-58
 Identities = 109/152 (71%), Positives = 129/152 (84%)
 Frame = +2

Query: 2   SSFSRNLADSRLPQIPGVKHGPNATSFVSTGIPDLDKILGGGFHLGSLVMVMEDGEAPHH 181
           SSFSRN + +   + PG KHGPN T+F+S+GIPDLDKIL GGF LGSLV+VMED EAPHH
Sbjct: 9   SSFSRNFSSAHSSKTPGFKHGPNGTTFISSGIPDLDKILCGGFPLGSLVLVMEDAEAPHH 68

Query: 182 LLLLRNFMSQGLVHNQPLLYASPSNDPKSFLGTLPSPVSPKDDKSRGHETEQEKGLRIAW 361
           +LLLRNFMSQGLVH+QPLLYASPS DP+ FLGTLPSP + KDDKSR + TEQEKGLRIAW
Sbjct: 69  MLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTEQEKGLRIAW 128

Query: 362 QYRKYFGENQLNNENNKDAKKEYCNEFDLRKP 457
           QY+KYFG++Q  + N  D+K E+CN+FDLR+P
Sbjct: 129 QYKKYFGDDQ-ESANAIDSKYEFCNDFDLRRP 159