BLASTX nr result

ID: Coptis21_contig00028485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028485
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269195.1| PREDICTED: uncharacterized protein LOC100265...   103   1e-20
ref|XP_002519376.1| conserved hypothetical protein [Ricinus comm...   103   2e-20
gb|ABK96167.1| unknown [Populus trichocarpa]                          102   3e-20
ref|XP_002303229.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_004169898.1| PREDICTED: uncharacterized protein LOC101230...    94   9e-18

>ref|XP_002269195.1| PREDICTED: uncharacterized protein LOC100265963 [Vitis vinifera]
           gi|297739435|emb|CBI29617.3| unnamed protein product
           [Vitis vinifera]
          Length = 282

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/82 (64%), Positives = 64/82 (78%), Gaps = 3/82 (3%)
 Frame = -2

Query: 239 KFMARRKKLC---TPSKNSDLGARRITSNVKQNLEFLKLWREFHKKKSNTPKPATSYRKK 69
           K +AR KK     +P K S+    RIT+NVKQNL+FLKLW+EF K+KS+TPKPATSYR+K
Sbjct: 14  KIVARSKKSSQQPSPYKGSESTPPRITTNVKQNLQFLKLWKEFQKRKSSTPKPATSYRRK 73

Query: 68  KGQKEEQLEDTELYLDPTVTLY 3
           K QK++  EDTELY DPTVTLY
Sbjct: 74  KVQKDDLPEDTELYHDPTVTLY 95


>ref|XP_002519376.1| conserved hypothetical protein [Ricinus communis]
           gi|223541443|gb|EEF42993.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 303

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/88 (60%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
 Frame = -2

Query: 263 RSCYCAFPKFMARRKKLCTPS-KNSDLGARRITSNVKQNLEFLKLWREFHKKKSNTPKPA 87
           R+ Y      M + KK  +PS K+ +    RITSN+KQNL+FLKLW+EF K+KS+TPKPA
Sbjct: 27  RNTYYKIVIVMGKNKKPRSPSPKDPEPAPPRITSNLKQNLQFLKLWKEFQKRKSSTPKPA 86

Query: 86  TSYRKKKGQKEEQLEDTELYLDPTVTLY 3
           TSYRKKK QKE+  EDTELY DPT++LY
Sbjct: 87  TSYRKKKVQKEDLPEDTELYRDPTLSLY 114


>gb|ABK96167.1| unknown [Populus trichocarpa]
          Length = 297

 Score =  102 bits (254), Expect = 3e-20
 Identities = 50/80 (62%), Positives = 64/80 (80%), Gaps = 3/80 (3%)
 Frame = -2

Query: 233 MARRKK---LCTPSKNSDLGARRITSNVKQNLEFLKLWREFHKKKSNTPKPATSYRKKKG 63
           MA+ KK     +P+K S+    RITSNVKQNL+FLKLW+EF K+KS+TPKP+TSYR+KK 
Sbjct: 29  MAKSKKSQPASSPNKGSESAPPRITSNVKQNLQFLKLWKEFQKRKSSTPKPSTSYRRKKV 88

Query: 62  QKEEQLEDTELYLDPTVTLY 3
           +KE+  EDTELY DPT++LY
Sbjct: 89  EKEDLPEDTELYRDPTLSLY 108


>ref|XP_002303229.1| predicted protein [Populus trichocarpa] gi|222840661|gb|EEE78208.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 44/64 (68%), Positives = 55/64 (85%)
 Frame = -2

Query: 194 SDLGARRITSNVKQNLEFLKLWREFHKKKSNTPKPATSYRKKKGQKEEQLEDTELYLDPT 15
           S+    RITSNVKQNL+FLKLW+EF K+KS+TPKP+TSYR+KK +KE+  EDTELY DPT
Sbjct: 1   SESAPPRITSNVKQNLQFLKLWKEFQKRKSSTPKPSTSYRRKKVEKEDLPEDTELYRDPT 60

Query: 14  VTLY 3
           ++LY
Sbjct: 61  LSLY 64


>ref|XP_004169898.1| PREDICTED: uncharacterized protein LOC101230835, partial [Cucumis
           sativus]
          Length = 259

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 52/100 (52%), Positives = 67/100 (67%), Gaps = 9/100 (9%)
 Frame = -2

Query: 275 PLPYRSCYCAFPKFMARRKKLCTPSKN------SDLGAR---RITSNVKQNLEFLKLWRE 123
           P  Y S +   PK   ++KKL   SK+      S  G+    RITSN+KQNL+FL+LW++
Sbjct: 25  PSSYSSLFS--PKKKKKKKKLLVVSKSKKQPQTSSAGSDPPPRITSNLKQNLQFLRLWKD 82

Query: 122 FHKKKSNTPKPATSYRKKKGQKEEQLEDTELYLDPTVTLY 3
           F K+KS  PKPATSYR+KK +KE+  EDTELY DPT+ LY
Sbjct: 83  FQKRKSGVPKPATSYRRKKVEKEDLPEDTELYRDPTLALY 122


Top