BLASTX nr result

ID: Coptis21_contig00028478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028478
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN43427.1| pathogenesis-related protein 1 [Vitis vinifera]         94   2e-17
gb|ADN43418.1| pathogenesis-related protein 1 [Vitis hybrid cult...    94   2e-17
gb|ADN43417.1| pathogenesis-related protein 1 [Vitis hybrid cult...    94   2e-17
ref|XP_002273416.1| PREDICTED: basic form of pathogenesis-relate...    94   2e-17
gb|ACF06544.1| pathogenesis-related protein [Elaeis guineensis]        93   3e-17

>gb|ADN43427.1| pathogenesis-related protein 1 [Vitis vinifera]
          Length = 159

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 42/80 (52%), Positives = 57/80 (71%)
 Frame = +2

Query: 194 LTFTCMVGLLAHLHVVQAIDTPEKWVKLHNDVRAKVGVGPLRWNGTLENYAKNYAIKRSG 373
           L F C+VGL A +H   A ++ + ++  HN  RA+VGVG + WN T+ +YA+NYA +R G
Sbjct: 7   LVFICLVGL-ALVHTSCAQNSQQDYLNAHNTARAQVGVGSMTWNNTVASYAQNYANQRIG 65

Query: 374 DCELIHSHGPYGENIYWGQG 433
           DC L+HS+GPYGENI WG G
Sbjct: 66  DCNLVHSNGPYGENIAWGSG 85


>gb|ADN43418.1| pathogenesis-related protein 1 [Vitis hybrid cultivar]
           gi|307340529|gb|ADN43426.1| pathogenesis-related protein
           1 [Vitis hybrid cultivar]
          Length = 160

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 42/80 (52%), Positives = 57/80 (71%)
 Frame = +2

Query: 194 LTFTCMVGLLAHLHVVQAIDTPEKWVKLHNDVRAKVGVGPLRWNGTLENYAKNYAIKRSG 373
           L F C+VGL A +H   A ++ + ++  HN  RA+VGVG + WN T+ +YA+NYA +R G
Sbjct: 8   LVFICLVGL-ALVHTSCAQNSQQDYLNAHNTARAQVGVGSMTWNNTVASYAQNYANQRIG 66

Query: 374 DCELIHSHGPYGENIYWGQG 433
           DC L+HS+GPYGENI WG G
Sbjct: 67  DCNLVHSNGPYGENIAWGSG 86


>gb|ADN43417.1| pathogenesis-related protein 1 [Vitis hybrid cultivar]
          Length = 160

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 42/80 (52%), Positives = 57/80 (71%)
 Frame = +2

Query: 194 LTFTCMVGLLAHLHVVQAIDTPEKWVKLHNDVRAKVGVGPLRWNGTLENYAKNYAIKRSG 373
           L F C+VGL A +H   A ++ + ++  HN  RA+VGVG + WN T+ +YA+NYA +R G
Sbjct: 8   LVFICLVGL-ALVHTSCAQNSQQDYLNAHNTARAQVGVGSMTWNNTVASYAQNYANQRIG 66

Query: 374 DCELIHSHGPYGENIYWGQG 433
           DC L+HS+GPYGENI WG G
Sbjct: 67  DCNLVHSNGPYGENIAWGSG 86


>ref|XP_002273416.1| PREDICTED: basic form of pathogenesis-related protein 1 [Vitis
           vinifera] gi|307340517|gb|ADN43420.1|
           pathogenesis-related protein 1 [Vitis hybrid cultivar]
           gi|307340519|gb|ADN43421.1| pathogenesis-related protein
           1 [Vitis hybrid cultivar] gi|307340521|gb|ADN43422.1|
           pathogenesis-related protein 1 [Vitis vinifera]
           gi|307340523|gb|ADN43423.1| pathogenesis-related protein
           1 [Vitis vinifera] gi|307340525|gb|ADN43424.1|
           pathogenesis-related protein 1 [Vitis vinifera]
           gi|307340527|gb|ADN43425.1| pathogenesis-related protein
           1 [Vitis vinifera]
          Length = 160

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 42/80 (52%), Positives = 57/80 (71%)
 Frame = +2

Query: 194 LTFTCMVGLLAHLHVVQAIDTPEKWVKLHNDVRAKVGVGPLRWNGTLENYAKNYAIKRSG 373
           L F C+VGL A +H   A ++ + ++  HN  RA+VGVG + WN T+ +YA+NYA +R G
Sbjct: 8   LVFICLVGL-ALVHTSCAQNSQQDYLNAHNTARAQVGVGSMTWNNTVASYAQNYANQRIG 66

Query: 374 DCELIHSHGPYGENIYWGQG 433
           DC L+HS+GPYGENI WG G
Sbjct: 67  DCNLVHSNGPYGENIAWGSG 86


>gb|ACF06544.1| pathogenesis-related protein [Elaeis guineensis]
          Length = 162

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/91 (50%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
 Frame = +2

Query: 179 MKSAVLTFT--CMVGLLAHLHVVQAIDTPEKWVKLHNDVRAKVGVGPLRWNGTLENYAKN 352
           MK + LTF   C V  LA  H   A ++P+ +V  HN  R  VGVGP+ W+ T+  YA+N
Sbjct: 1   MKFSNLTFALACAV-FLAMAHTTIAQNSPQDFVSAHNAARTAVGVGPVSWDDTVAAYAQN 59

Query: 353 YAIKRSGDCELIHSHGPYGENIYWGQGEGVT 445
           YA +R GDC+L+HS GPYGEN++WG GE  T
Sbjct: 60  YANQRIGDCKLVHSGGPYGENLFWGLGEEYT 90


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