BLASTX nr result

ID: Coptis21_contig00028470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028470
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615681.1| NBS-LRR resistance protein [Medicago truncat...    66   3e-09
ref|XP_003615746.1| Nbs-lrr resistance protein [Medicago truncat...    64   2e-08
ref|XP_003615721.1| NBS-LRR resistance protein [Medicago truncat...    62   5e-08
ref|XP_002302928.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_003623515.1| NBS resistance protein [Medicago truncatula]...    62   6e-08

>ref|XP_003615681.1| NBS-LRR resistance protein [Medicago truncatula]
            gi|355517016|gb|AES98639.1| NBS-LRR resistance protein
            [Medicago truncatula]
          Length = 1016

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/88 (45%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
 Frame = +3

Query: 42   NENDYPNLHSFSI-YCSEQSSLP-QGFNKLTAIQTLIFFSCRFLDFTPEDLKHLPMLQLL 215
            NE   P L    I YC+E  SLP Q +  L +++TL  +SC  L   PE ++HL  L+LL
Sbjct: 926  NETFNPALTLLCICYCNELESLPEQNWEGLQSLRTLHIYSCEGLRCLPEGIRHLTSLELL 985

Query: 216  KIYLCPILEERCRKR--ESWTTNSHIPK 293
             I  C  L+ERC+KR  E W   SHIPK
Sbjct: 986  TIIGCRTLKERCKKRTGEDWDKISHIPK 1013


>ref|XP_003615746.1| Nbs-lrr resistance protein [Medicago truncatula]
            gi|355517081|gb|AES98704.1| Nbs-lrr resistance protein
            [Medicago truncatula]
          Length = 1014

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
 Frame = +3

Query: 84   CSEQSSLPQGFNKLTAIQTLIFFSCRFLDFTPEDLKHLPMLQLLKIYLCPILEERCRKR- 260
            C     LP+G   LT+++ L  +SC+ L   PE ++HL  L++L I+ CP LEERC++  
Sbjct: 937  CRGLRCLPEGIRHLTSLRNLQIYSCKGLRCLPEGIRHLTSLEVLTIWECPTLEERCKEGT 996

Query: 261  -ESWTTNSHIPK 293
             E W   +HIPK
Sbjct: 997  WEDWDKIAHIPK 1008


>ref|XP_003615721.1| NBS-LRR resistance protein [Medicago truncatula]
            gi|355517056|gb|AES98679.1| NBS-LRR resistance protein
            [Medicago truncatula]
          Length = 988

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
 Frame = +3

Query: 60   NLHSFSIY-CSEQSSLP-QGFNKLTAIQTLIFFSCRFLDFTPEDLKHLPMLQLLKIYLCP 233
            +L S SI  C+E  SLP Q +  L +++TL  +SC  L   PE ++HL  L+LL I  CP
Sbjct: 903  SLQSLSIISCNELESLPEQNWEGLQSLRTLQIYSCEGLRCLPEGIRHLTSLELLTIINCP 962

Query: 234  ILEERCRK--RESWTTNSHIP 290
             LEERC++   E W   +HIP
Sbjct: 963  TLEERCKEGTGEDWDKIAHIP 983


>ref|XP_002302928.1| predicted protein [Populus trichocarpa] gi|222844654|gb|EEE82201.1|
           predicted protein [Populus trichocarpa]
          Length = 475

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
 Frame = +3

Query: 81  YCSEQSSLPQGFNKLTAIQTLIFFSCRFLDFTPEDLKHLPMLQLLKIYLCPILEERCRK- 257
           YC + +SL +G   LTA++ L   +C  L+  PE ++HL  LQ L I+ CP LE+RC K 
Sbjct: 397 YCDKFTSLTEGVRHLTALEDLELGNCPELNSLPESIQHLTSLQSLSIWKCPNLEKRCEKD 456

Query: 258 -RESWTTNSHIPK 293
             E W   +HIP+
Sbjct: 457 LGEDWPKIAHIPQ 469


>ref|XP_003623515.1| NBS resistance protein [Medicago truncatula]
            gi|355498530|gb|AES79733.1| NBS resistance protein
            [Medicago truncatula]
          Length = 1007

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
 Frame = +3

Query: 42   NENDYPNLHSFSIY-CSEQSSLPQG-FNKLTAIQTLIFFSCRFLDFTPEDLKHLPMLQLL 215
            NE   P L    IY C+E  SLP+  +  L +++TL  + C+ +   PE ++HL  L+ L
Sbjct: 916  NEPFNPALTHLYIYNCNEIESLPEKMWEGLQSLRTLEIWDCKGMRCLPEGIRHLTSLEFL 975

Query: 216  KIYLCPILEERCRK--RESWTTNSHIPK 293
            +I+ CP LEERC++   E W   +HIPK
Sbjct: 976  RIWSCPTLEERCKEGTGEDWDKIAHIPK 1003


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