BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028463
         (1072 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP89574.1| PsbP domain protein 1 [Gossypium hirsutum]             329   6e-88
ref|XP_002330072.1| predicted protein [Populus trichocarpa] gi|2...   323   4e-86
ref|XP_002512537.1| Thylakoid lumenal 21.5 kDa protein, chloropl...   318   2e-84
ref|XP_002319475.1| predicted protein [Populus trichocarpa] gi|1...   312   1e-82
ref|XP_002281448.2| PREDICTED: psbP domain-containing protein 1,...   307   3e-81

>gb|ADP89574.1| PsbP domain protein 1 [Gossypium hirsutum]
          Length = 257

 Score =  329 bits (844), Expect = 6e-88
 Identities = 171/237 (72%), Positives = 195/237 (82%), Gaps = 2/237 (0%)
 Frame = -2

Query: 921 FAPSASPGSRVLCTCRGQHDTASKVPRRNVLALMLSSVIFQD-GSCDN-ALAQPSVAFRE 748
           F PSAS     LCT R Q   AS +PRRN +AL+LS+ IF + G  DN A A+PSV FRE
Sbjct: 24  FPPSAS----CLCTRRNQSFQASSIPRRNAMALILSTYIFSEVGLHDNIAFAEPSVGFRE 79

Query: 747 YIDSFDGYSFKYPQNWIPVRGAGADIFFRDPFILDENLXXXXXXXXXXXXXSVEDLGPPQ 568
           YID+FDGYS KYPQNWI VRGAGADIFFRDP++LDENL             +VEDLGPP+
Sbjct: 80  YIDTFDGYSLKYPQNWIQVRGAGADIFFRDPYVLDENLSVELSSPSSSRYKTVEDLGPPE 139

Query: 567 VAGEKVLKQYLTEFMSTRLGVRREASIRSTSSRVADDGKLYYQIEVNIKSYANNNELAVM 388
            AG+KVLKQYLTEFMSTRLGVRRE++I STSSRVADDGKLYYQ+EVNIKSYAN NELAVM
Sbjct: 140 EAGKKVLKQYLTEFMSTRLGVRRESNILSTSSRVADDGKLYYQVEVNIKSYANTNELAVM 199

Query: 387 PENRIPRLEWDRRYLSVLGVENKQLYELRLQTPENVFLEEEGDLRKVMESFRVFKVA 217
           P++R+PRLEW+RRYLSVLGVEN +LYELRLQTPE+VF+EEE DLR+VM+SFRV KVA
Sbjct: 200 PQDRVPRLEWNRRYLSVLGVENNRLYELRLQTPESVFVEEENDLRQVMDSFRVNKVA 256


>ref|XP_002330072.1| predicted protein [Populus trichocarpa] gi|222871497|gb|EEF08628.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  323 bits (828), Expect = 4e-86
 Identities = 165/211 (78%), Positives = 178/211 (84%), Gaps = 1/211 (0%)
 Frame = -2

Query: 849 VPRRNVLALMLSSVIFQDGSCDN-ALAQPSVAFREYIDSFDGYSFKYPQNWIPVRGAGAD 673
           VPRRN +AL+LSS +F +   DN A AQ SV FREYID FDGYSFKYPQNWI VRGAGAD
Sbjct: 2   VPRRNAMALILSSYMFSEFGFDNLAFAQQSVGFREYIDQFDGYSFKYPQNWIQVRGAGAD 61

Query: 672 IFFRDPFILDENLXXXXXXXXXXXXXSVEDLGPPQVAGEKVLKQYLTEFMSTRLGVRREA 493
           IFFRDPF+LDENL             SVEDLGPPQ AG+KVLKQYLTEFMSTRLGVRRE+
Sbjct: 62  IFFRDPFVLDENLSVELSSPSSSRYKSVEDLGPPQEAGKKVLKQYLTEFMSTRLGVRRES 121

Query: 492 SIRSTSSRVADDGKLYYQIEVNIKSYANNNELAVMPENRIPRLEWDRRYLSVLGVENKQL 313
           +I STSSRVADDGKLYYQ+EVNIKSYANNNELAVMP  R+ RLEWDRRYLSVLGVEN QL
Sbjct: 122 NILSTSSRVADDGKLYYQVEVNIKSYANNNELAVMPRERVVRLEWDRRYLSVLGVENNQL 181

Query: 312 YELRLQTPENVFLEEEGDLRKVMESFRVFKV 220
           YELRLQTPENVF+EEE DLRKVM+SFRV K+
Sbjct: 182 YELRLQTPENVFVEEENDLRKVMDSFRVNKI 212


>ref|XP_002512537.1| Thylakoid lumenal 21.5 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223548498|gb|EEF49989.1| Thylakoid
           lumenal 21.5 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 265

 Score =  318 bits (814), Expect = 2e-84
 Identities = 162/222 (72%), Positives = 184/222 (82%), Gaps = 1/222 (0%)
 Frame = -2

Query: 882 TCRGQHDTASKVPRRNVLALMLSSVIFQD-GSCDNALAQPSVAFREYIDSFDGYSFKYPQ 706
           +C+ Q   A  VPRR+ +AL+ SS I  + G   +ALAQ SV FREYID+FDGYSFKYP+
Sbjct: 44  SCKNQPTKAFAVPRRSTMALIFSSCILSEVGFHSSALAQSSVGFREYIDTFDGYSFKYPK 103

Query: 705 NWIPVRGAGADIFFRDPFILDENLXXXXXXXXXXXXXSVEDLGPPQVAGEKVLKQYLTEF 526
           NWI VRGAGADIFFRDP++LDENL             SVEDLGPPQ AG+KVLKQYLTEF
Sbjct: 104 NWIQVRGAGADIFFRDPYVLDENLSVEMSSPSSSKYTSVEDLGPPQEAGKKVLKQYLTEF 163

Query: 525 MSTRLGVRREASIRSTSSRVADDGKLYYQIEVNIKSYANNNELAVMPENRIPRLEWDRRY 346
           MSTRLGVRRE+ I STSSRVADDGKLYYQ+EVNIKSYANNNE+AVMP++R+ RLEW+RRY
Sbjct: 164 MSTRLGVRRESDILSTSSRVADDGKLYYQVEVNIKSYANNNEMAVMPQDRVVRLEWNRRY 223

Query: 345 LSVLGVENKQLYELRLQTPENVFLEEEGDLRKVMESFRVFKV 220
           LSVLGVEN +LYELRLQTPENVF+EEE DLR+VMESFRV KV
Sbjct: 224 LSVLGVENNRLYELRLQTPENVFVEEENDLRQVMESFRVNKV 265


>ref|XP_002319475.1| predicted protein [Populus trichocarpa] gi|118485159|gb|ABK94442.1|
           unknown [Populus trichocarpa]
           gi|222857851|gb|EEE95398.1| predicted protein [Populus
           trichocarpa]
          Length = 265

 Score =  312 bits (799), Expect = 1e-82
 Identities = 160/214 (74%), Positives = 179/214 (83%), Gaps = 1/214 (0%)
 Frame = -2

Query: 858 ASKVPRRNVLALMLSSVIFQDGSCDN-ALAQPSVAFREYIDSFDGYSFKYPQNWIPVRGA 682
           A  VPRRN +AL+LSS IF +   +N A AQ SV FREYID FDGYS K+PQNWI VRGA
Sbjct: 50  AFAVPRRNAMALILSSYIFSEVGFNNIAFAQRSVGFREYIDQFDGYSLKHPQNWIQVRGA 109

Query: 681 GADIFFRDPFILDENLXXXXXXXXXXXXXSVEDLGPPQVAGEKVLKQYLTEFMSTRLGVR 502
           GADIFFRDPF+LDENL             SVEDLGPP+ AG+KVLKQYLTEFMSTRLGVR
Sbjct: 110 GADIFFRDPFVLDENLSVELSSPSSSNYKSVEDLGPPEEAGKKVLKQYLTEFMSTRLGVR 169

Query: 501 REASIRSTSSRVADDGKLYYQIEVNIKSYANNNELAVMPENRIPRLEWDRRYLSVLGVEN 322
           RE++I STSSRVADDGKLYYQ+EVNIKSYANNNELAVMP+ R+ RLEW+RRY+SVLGVEN
Sbjct: 170 RESNIISTSSRVADDGKLYYQVEVNIKSYANNNELAVMPQERVVRLEWNRRYMSVLGVEN 229

Query: 321 KQLYELRLQTPENVFLEEEGDLRKVMESFRVFKV 220
            +LYELRLQTPENVF+EEE DLR+VM+SFRV KV
Sbjct: 230 NRLYELRLQTPENVFVEEENDLRQVMDSFRVNKV 263


>ref|XP_002281448.2| PREDICTED: psbP domain-containing protein 1, chloroplastic [Vitis
           vinifera]
          Length = 282

 Score =  307 bits (787), Expect = 3e-81
 Identities = 162/236 (68%), Positives = 185/236 (78%), Gaps = 1/236 (0%)
 Frame = -2

Query: 921 FAPSASPGSRVLCTCRGQHDTASKVPRRNVLALMLSSVIFQD-GSCDNALAQPSVAFREY 745
           FA +    S    +C+ Q      V RR+ +AL+ SS IF   G  D ALAQPSV FREY
Sbjct: 46  FATTNYSASSRAISCQLQTTKGFAVLRRDAMALIFSSYIFSRVGLHDVALAQPSVGFREY 105

Query: 744 IDSFDGYSFKYPQNWIPVRGAGADIFFRDPFILDENLXXXXXXXXXXXXXSVEDLGPPQV 565
           ID+FDGYSFKYPQNWI VRG+GADIFFRDPF+LDENL             SVEDLG PQ 
Sbjct: 106 IDTFDGYSFKYPQNWIQVRGSGADIFFRDPFVLDENLSVELSSPSSSRYKSVEDLGQPQE 165

Query: 564 AGEKVLKQYLTEFMSTRLGVRREASIRSTSSRVADDGKLYYQIEVNIKSYANNNELAVMP 385
           AG+KVL+QYLTEFMSTRLGVRRE++I STSSRVADDG+ YYQ+EVNIKSYANNNELAVMP
Sbjct: 166 AGKKVLQQYLTEFMSTRLGVRRESNIVSTSSRVADDGRTYYQVEVNIKSYANNNELAVMP 225

Query: 384 ENRIPRLEWDRRYLSVLGVENKQLYELRLQTPENVFLEEEGDLRKVMESFRVFKVA 217
            +R+ RLEWDRRYLSVLGVEN +LYELRLQTPE+VFLEEE +LR+VM+SFRV K +
Sbjct: 226 TDRVTRLEWDRRYLSVLGVENNRLYELRLQTPESVFLEEENELRQVMDSFRVNKAS 281