BLASTX nr result

ID: Coptis21_contig00028461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028461
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268156.2| PREDICTED: protein PRD1-like [Vitis vinifera]      74   2e-11
emb|CBI39380.3| unnamed protein product [Vitis vinifera]               74   2e-11
emb|CAN80933.1| hypothetical protein VITISV_017363 [Vitis vinifera]    73   3e-11
ref|XP_004138537.1| PREDICTED: protein PRD1-like [Cucumis sativu...    67   2e-09
ref|XP_002516401.1| conserved hypothetical protein [Ricinus comm...    64   1e-08

>ref|XP_002268156.2| PREDICTED: protein PRD1-like [Vitis vinifera]
          Length = 1291

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/96 (42%), Positives = 59/96 (61%)
 Frame = -3

Query: 289  SNQLWLYGIGKEIYHLFXXXXXXXSHQIFNLCSILIFNILRSIEAETLLNHEEVWVPLTI 110
            S+QL ++GIG  I  LF       S Q+F   +ILIF+IL S++ ETL +  E W+ +T+
Sbjct: 844  SDQLSMHGIGNGIQDLFSHSSHSLSQQMFVAIAILIFDILWSVQPETL-SDGETWLSVTM 902

Query: 109  RFLEVLCPTIVGDACNSEMLLLIGIFSLILHHSTNR 2
            + +  L P +       E LL++GI SLILHHSTN+
Sbjct: 903  KLMGYLIPMVTAGGWTQESLLVLGILSLILHHSTNQ 938


>emb|CBI39380.3| unnamed protein product [Vitis vinifera]
          Length = 1312

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/96 (42%), Positives = 59/96 (61%)
 Frame = -3

Query: 289  SNQLWLYGIGKEIYHLFXXXXXXXSHQIFNLCSILIFNILRSIEAETLLNHEEVWVPLTI 110
            S+QL ++GIG  I  LF       S Q+F   +ILIF+IL S++ ETL +  E W+ +T+
Sbjct: 865  SDQLSMHGIGNGIQDLFSHSSHSLSQQMFVAIAILIFDILWSVQPETL-SDGETWLSVTM 923

Query: 109  RFLEVLCPTIVGDACNSEMLLLIGIFSLILHHSTNR 2
            + +  L P +       E LL++GI SLILHHSTN+
Sbjct: 924  KLMGYLIPMVTAGGWTQESLLVLGILSLILHHSTNQ 959


>emb|CAN80933.1| hypothetical protein VITISV_017363 [Vitis vinifera]
          Length = 928

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 41/96 (42%), Positives = 58/96 (60%)
 Frame = -3

Query: 289 SNQLWLYGIGKEIYHLFXXXXXXXSHQIFNLCSILIFNILRSIEAETLLNHEEVWVPLTI 110
           S+QL ++GIG  I  LF       S Q F   +ILIF+IL S++ ETL +  E W+ +T+
Sbjct: 573 SDQLSMHGIGNGIQDLFSHSSHSLSQQXFVAIAILIFDILWSVQPETL-SDGETWLSVTM 631

Query: 109 RFLEVLCPTIVGDACNSEMLLLIGIFSLILHHSTNR 2
           + +  L P +       E LL++GI SLILHHSTN+
Sbjct: 632 KLMGYLIPMVTAGGWTQESLLVLGILSLILHHSTNQ 667


>ref|XP_004138537.1| PREDICTED: protein PRD1-like [Cucumis sativus]
            gi|449496798|ref|XP_004160229.1| PREDICTED: protein
            PRD1-like [Cucumis sativus]
          Length = 1256

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/95 (35%), Positives = 60/95 (63%)
 Frame = -3

Query: 289  SNQLWLYGIGKEIYHLFXXXXXXXSHQIFNLCSILIFNILRSIEAETLLNHEEVWVPLTI 110
            ++QL ++GIG  I  +F         Q F    +L+F++L+S  +  +L+++E W+ +T+
Sbjct: 813  ADQLHVHGIGNAIKLIFYNTKNSYCKQTFKAVLLLVFSVLKSGHSG-MLSNDEAWLAVTV 871

Query: 109  RFLEVLCPTIVGDACNSEMLLLIGIFSLILHHSTN 5
            + L+ + PT V D  + E+LL++ I SLILHHST+
Sbjct: 872  KLLDWISPTDVTDRWSPEILLVVAILSLILHHSTD 906


>ref|XP_002516401.1| conserved hypothetical protein [Ricinus communis]
            gi|223544499|gb|EEF46018.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1304

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/95 (37%), Positives = 59/95 (62%)
 Frame = -3

Query: 289  SNQLWLYGIGKEIYHLFXXXXXXXSHQIFNLCSILIFNILRSIEAETLLNHEEVWVPLTI 110
            S+QL L GIG+ I ++        S QIF   S+L+FNIL+S+ ++ L   +E W+ +T+
Sbjct: 851  SDQLSLNGIGRAIRNICYNPSHFSSPQIFMAISLLVFNILKSVHSKALCE-DEAWLAVTV 909

Query: 109  RFLEVLCPTIVGDACNSEMLLLIGIFSLILHHSTN 5
            +F+  L  ++   + ++E L +I IFS ILH ST+
Sbjct: 910  KFMNCLTLSMAEKSWSAEGLQIIAIFSFILHQSTS 944


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