BLASTX nr result

ID: Coptis21_contig00028460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028460
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62571.1| hypothetical protein VITISV_021320 [Vitis vinifera]    77   3e-21
ref|XP_002277559.1| PREDICTED: vacuolar protein sorting-associat...    77   3e-21
emb|CBI39020.3| unnamed protein product [Vitis vinifera]               77   3e-21
ref|XP_003533829.1| PREDICTED: vacuolar protein sorting-associat...    77   5e-20
ref|XP_003546560.1| PREDICTED: vacuolar protein sorting-associat...    77   7e-20

>emb|CAN62571.1| hypothetical protein VITISV_021320 [Vitis vinifera]
          Length = 266

 Score = 77.0 bits (188), Expect(2) = 3e-21
 Identities = 44/53 (83%), Positives = 48/53 (90%), Gaps = 1/53 (1%)
 Frame = +2

Query: 113 LQIEMLSESIDETLDKDEAEE-TEELTNQVLDEIGVDIASQLSSALKELKVGS 268
           + IEM+SESIDETLDKDEAEE TEELTNQVLDEIGVDIASQLSSA K  ++GS
Sbjct: 187 MTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKG-RIGS 238



 Score = 49.7 bits (117), Expect(2) = 3e-21
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = +1

Query: 256 KGRISSKKVENVVPARSNSTDVEDLEKRLASLR 354
           KGRI SKKVENVVP+ S S DVE+LEKRLASLR
Sbjct: 233 KGRIGSKKVENVVPS-SESPDVEELEKRLASLR 264


>ref|XP_002277559.1| PREDICTED: vacuolar protein sorting-associated protein 2 homolog
           2-like [Vitis vinifera]
          Length = 216

 Score = 77.0 bits (188), Expect(2) = 3e-21
 Identities = 44/53 (83%), Positives = 48/53 (90%), Gaps = 1/53 (1%)
 Frame = +2

Query: 113 LQIEMLSESIDETLDKDEAEE-TEELTNQVLDEIGVDIASQLSSALKELKVGS 268
           + IEM+SESIDETLDKDEAEE TEELTNQVLDEIGVDIASQLSSA K  ++GS
Sbjct: 137 MTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKG-RIGS 188



 Score = 49.7 bits (117), Expect(2) = 3e-21
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = +1

Query: 256 KGRISSKKVENVVPARSNSTDVEDLEKRLASLR 354
           KGRI SKKVENVVP+ S S DVE+LEKRLASLR
Sbjct: 183 KGRIGSKKVENVVPS-SESPDVEELEKRLASLR 214


>emb|CBI39020.3| unnamed protein product [Vitis vinifera]
          Length = 215

 Score = 77.0 bits (188), Expect(2) = 3e-21
 Identities = 44/53 (83%), Positives = 48/53 (90%), Gaps = 1/53 (1%)
 Frame = +2

Query: 113 LQIEMLSESIDETLDKDEAEE-TEELTNQVLDEIGVDIASQLSSALKELKVGS 268
           + IEM+SESIDETLDKDEAEE TEELTNQVLDEIGVDIASQLSSA K  ++GS
Sbjct: 136 MTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKG-RIGS 187



 Score = 49.7 bits (117), Expect(2) = 3e-21
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = +1

Query: 256 KGRISSKKVENVVPARSNSTDVEDLEKRLASLR 354
           KGRI SKKVENVVP+ S S DVE+LEKRLASLR
Sbjct: 182 KGRIGSKKVENVVPS-SESPDVEELEKRLASLR 213


>ref|XP_003533829.1| PREDICTED: vacuolar protein sorting-associated protein 2 homolog
           2-like [Glycine max]
          Length = 219

 Score = 76.6 bits (187), Expect(2) = 5e-20
 Identities = 42/47 (89%), Positives = 44/47 (93%), Gaps = 1/47 (2%)
 Frame = +2

Query: 113 LQIEMLSESIDETLDKDEAEE-TEELTNQVLDEIGVDIASQLSSALK 250
           + IEM+SESIDETLDKDEAEE TEELTNQVLDEIGVDIASQLSSA K
Sbjct: 139 MTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPK 185



 Score = 45.8 bits (107), Expect(2) = 5e-20
 Identities = 22/33 (66%), Positives = 26/33 (78%)
 Frame = +1

Query: 256 KGRISSKKVENVVPARSNSTDVEDLEKRLASLR 354
           KGRI+S+  ENV P  + S DVE+LEKRLASLR
Sbjct: 185 KGRIASRNTENVAPRPAESQDVEELEKRLASLR 217


>ref|XP_003546560.1| PREDICTED: vacuolar protein sorting-associated protein 2 homolog
           2-like [Glycine max]
          Length = 217

 Score = 76.6 bits (187), Expect(2) = 7e-20
 Identities = 42/47 (89%), Positives = 44/47 (93%), Gaps = 1/47 (2%)
 Frame = +2

Query: 113 LQIEMLSESIDETLDKDEAEE-TEELTNQVLDEIGVDIASQLSSALK 250
           + IEM+SESIDETLDKDEAEE TEELTNQVLDEIGVDIASQLSSA K
Sbjct: 137 MTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPK 183



 Score = 45.4 bits (106), Expect(2) = 7e-20
 Identities = 23/33 (69%), Positives = 25/33 (75%)
 Frame = +1

Query: 256 KGRISSKKVENVVPARSNSTDVEDLEKRLASLR 354
           KGRI+S   ENV P  + S DVEDLEKRLASLR
Sbjct: 183 KGRIASINTENVAPRPAESQDVEDLEKRLASLR 215


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