BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028451
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328932.1| predicted protein [Populus trichocarpa] gi|2...   108   7e-22
ref|XP_002275052.2| PREDICTED: double-stranded RNA-binding prote...   106   4e-21
emb|CBI21312.3| unnamed protein product [Vitis vinifera]              106   4e-21
emb|CAN71476.1| hypothetical protein VITISV_038619 [Vitis vinifera]   106   4e-21
ref|XP_002512890.1| double-stranded RNA binding protein, putativ...    79   5e-13

>ref|XP_002328932.1| predicted protein [Populus trichocarpa] gi|222839362|gb|EEE77699.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  108 bits (270), Expect = 7e-22
 Identities = 77/185 (41%), Positives = 101/185 (54%), Gaps = 20/185 (10%)
 Frame = +1

Query: 1   TSSKILPPSSSTDESNHSSLCSPNNGIPVQVKSNSLAMKQDIAPPLEEHQKDEDEWLCKK 180
           T+SKILPP+S  D  +H  L   N  IP+QVK  S     +I   LEEH KDE+EWL  K
Sbjct: 11  TTSKILPPTSHIDNPSHFIL---NRPIPLQVKGKSQVQAPEIPVALEEHLKDEEEWLGTK 67

Query: 181 AIITEKSTGKD-PNNANPNSVFRQQPKYLN-PFNS------SFLDHTQQNIH-------- 312
           + + +K   K+  +N+NP+S++     Y   PF++      S LD+T Q+          
Sbjct: 68  SDVIKKPIEKEGTSNSNPSSLYASSSIYRPFPFSNTGKPVTSLLDNTSQHESTHISSRIF 127

Query: 313 --PRPYRPATSMGIRTNGSNATTSQRMLNSGGFHVHNIAPAVHIRSVIPVCATP--PMRP 480
             P P  P  S  I T  +  T   R + +GGF+ H IAPAV IRSVIPVCA P  P+RP
Sbjct: 128 GSPNP-SPMASTSIHTPSN--THIPRPMFTGGFNPHRIAPAVQIRSVIPVCAAPPSPIRP 184

Query: 481 PSSNS 495
           P S S
Sbjct: 185 PQSPS 189


>ref|XP_002275052.2| PREDICTED: double-stranded RNA-binding protein 5 [Vitis vinifera]
          Length = 484

 Score =  106 bits (264), Expect = 4e-21
 Identities = 76/182 (41%), Positives = 94/182 (51%), Gaps = 16/182 (8%)
 Frame = +1

Query: 1   TSSKILPPSSSTDESNHSSLCSPNNGIPVQVKSNSLAMKQDIAPPLEEHQKDEDEWLCKK 180
           T+SKILPP S  D     SL      IPVQ    S     ++   LEEHQ+DE+EWL  K
Sbjct: 264 TASKILPPISPRDTL---SLYPSTRPIPVQAIGRSQVKMPEVPTLLEEHQRDEEEWLDGK 320

Query: 181 AIITEKSTGKD-PNNANPNSVFRQQPKYLNPF--------NSSFLD-----HTQQNIHPR 318
           + +  K T K+ P+NAN +SV+     Y  PF        N+S  D     H Q +I   
Sbjct: 321 SNLIRKPTEKECPSNANASSVYGANSIY-RPFPLPNAGKLNTSLPDSPHQPHEQTHIKNN 379

Query: 319 PYRPATSMGIRTNGSNATTSQRMLNSGGFHVHNIAPAVHIRSVIPVCAT--PPMRPPSSN 492
           P+   T   ++  GS      R + +GGF  H IAPAV IRSVIPVCA   PPMR P SN
Sbjct: 380 PFGNPTPSAMK--GSAGIHIPRTMGTGGFQPHRIAPAVQIRSVIPVCAAPPPPMRLPPSN 437

Query: 493 SP 498
            P
Sbjct: 438 HP 439


>emb|CBI21312.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  106 bits (264), Expect = 4e-21
 Identities = 76/182 (41%), Positives = 94/182 (51%), Gaps = 16/182 (8%)
 Frame = +1

Query: 1   TSSKILPPSSSTDESNHSSLCSPNNGIPVQVKSNSLAMKQDIAPPLEEHQKDEDEWLCKK 180
           T+SKILPP S  D     SL      IPVQ    S     ++   LEEHQ+DE+EWL  K
Sbjct: 261 TASKILPPISPRDTL---SLYPSTRPIPVQAIGRSQVKMPEVPTLLEEHQRDEEEWLDGK 317

Query: 181 AIITEKSTGKD-PNNANPNSVFRQQPKYLNPF--------NSSFLD-----HTQQNIHPR 318
           + +  K T K+ P+NAN +SV+     Y  PF        N+S  D     H Q +I   
Sbjct: 318 SNLIRKPTEKECPSNANASSVYGANSIY-RPFPLPNAGKLNTSLPDSPHQPHEQTHIKNN 376

Query: 319 PYRPATSMGIRTNGSNATTSQRMLNSGGFHVHNIAPAVHIRSVIPVCAT--PPMRPPSSN 492
           P+   T   ++  GS      R + +GGF  H IAPAV IRSVIPVCA   PPMR P SN
Sbjct: 377 PFGNPTPSAMK--GSAGIHIPRTMGTGGFQPHRIAPAVQIRSVIPVCAAPPPPMRLPPSN 434

Query: 493 SP 498
            P
Sbjct: 435 HP 436


>emb|CAN71476.1| hypothetical protein VITISV_038619 [Vitis vinifera]
          Length = 552

 Score =  106 bits (264), Expect = 4e-21
 Identities = 76/182 (41%), Positives = 94/182 (51%), Gaps = 16/182 (8%)
 Frame = +1

Query: 1   TSSKILPPSSSTDESNHSSLCSPNNGIPVQVKSNSLAMKQDIAPPLEEHQKDEDEWLCKK 180
           T+SKILPP S  D     SL      IPVQ    S     ++   LEEHQ+DE+EWL  K
Sbjct: 332 TASKILPPISPRDTL---SLYPSTRPIPVQAIGRSQVKMPEVPTLLEEHQRDEEEWLDGK 388

Query: 181 AIITEKSTGKD-PNNANPNSVFRQQPKYLNPF--------NSSFLD-----HTQQNIHPR 318
           + +  K T K+ P+NAN +SV+     Y  PF        N+S  D     H Q +I   
Sbjct: 389 SNLIRKPTEKECPSNANASSVYGANSIY-RPFPLPNAGKLNTSLPDSPHQPHEQTHIKNN 447

Query: 319 PYRPATSMGIRTNGSNATTSQRMLNSGGFHVHNIAPAVHIRSVIPVCAT--PPMRPPSSN 492
           P+   T   ++  GS      R + +GGF  H IAPAV IRSVIPVCA   PPMR P SN
Sbjct: 448 PFGNPTPSAMK--GSAGIHIPRTMGTGGFQPHRIAPAVQIRSVIPVCAAPPPPMRLPPSN 505

Query: 493 SP 498
            P
Sbjct: 506 HP 507


>ref|XP_002512890.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223547901|gb|EEF49393.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 477

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 63/172 (36%), Positives = 87/172 (50%), Gaps = 6/172 (3%)
 Frame = +1

Query: 1   TSSKILPPSSSTDE--SNHSSLCSPNNGIPVQVKSNSLAMKQDIAPPLEEHQKDEDEW-- 168
           T+SKILPP+S  D   S  SS C+P+    +QVK      +      +EEHQKDE+EW  
Sbjct: 270 TTSKILPPTSPIDNPYSYPSSRCNPHQ---IQVKGKQQTKE------IEEHQKDEEEWPG 320

Query: 169 LCKKAIITEKSTGKDPNNANPNSVFRQQPKYLNPFNSSFLDHTQQNIHPRPYRPATSMGI 348
             KK+I  E S+     ++   S++RQ P             +  +I  R + P+++   
Sbjct: 321 AIKKSIEKESSSSSVYGSS---SLYRQFPH----------QESTSHIGNRIFGPSSTSIK 367

Query: 349 RTNGSNATTSQRMLNSGGFHVHNIAPAVHIRSVIPVCATPP--MRPPSSNSP 498
            T  S    S     SG  + H IAPAV IRSVIPVCA PP  +RP  + +P
Sbjct: 368 STPSSIHMCSNSPFYSGMLYPHRIAPAVQIRSVIPVCAAPPAAVRPAPAPAP 419