BLASTX nr result

ID: Coptis21_contig00028448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028448
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABV58319.1| metallothionein class I type 3 [Avicennia marina]...   100   2e-19
sp|Q96386.1|MT3_CARPA RecName: Full=Metallothionein-like protein...    95   5e-18
gb|AEQ54919.1| metallothionin 3 [Salvia miltiorrhiza]                  94   9e-18
gb|ADB02892.1| metallothionein-like MT-3 [Jatropha curcas]             94   9e-18
gb|ACC77568.1| type 3 metallothionein [Prosopis juliflora]             93   3e-17

>gb|ABV58319.1| metallothionein class I type 3 [Avicennia marina]
           gi|157497147|gb|ABV58320.1| metallothionein class I type
           3 [Avicennia marina]
          Length = 61

 Score =  100 bits (248), Expect = 2e-19
 Identities = 42/59 (71%), Positives = 49/59 (83%), Gaps = 4/59 (6%)
 Frame = +2

Query: 71  CGNCDCADTTQCVKKGYAADIIETEKSYTVEALV----GGEHDGKCKCGPNCACTDCTC 235
           CGNCDCAD +QC+KKGYAA+IIETEKSY   A++      EHDGKCKCGP+CACT+CTC
Sbjct: 1   CGNCDCADKSQCMKKGYAAEIIETEKSYMEAAMLVDAPAAEHDGKCKCGPSCACTNCTC 59


>sp|Q96386.1|MT3_CARPA RecName: Full=Metallothionein-like protein type 3; Short=MT-3
           gi|1566700|emb|CAA69624.1| metallothionein-like protein
           [Carica papaya] gi|354464673|gb|AER26532.1|
           metallothionein-like protein [Carica papaya]
          Length = 65

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 44/63 (69%), Positives = 49/63 (77%), Gaps = 4/63 (6%)
 Frame = +2

Query: 59  MSNTCGNCDCADTTQCVKKG--YAADIIETEKSY--TVEALVGGEHDGKCKCGPNCACTD 226
           MS+TCGNCDCAD TQCVKKG  Y ADIIETEKS    V      E+DGKCKCGP+C+CT+
Sbjct: 1   MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMTVVMDAPAAENDGKCKCGPSCSCTN 60

Query: 227 CTC 235
           CTC
Sbjct: 61  CTC 63


>gb|AEQ54919.1| metallothionin 3 [Salvia miltiorrhiza]
          Length = 63

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 40/61 (65%), Positives = 48/61 (78%), Gaps = 2/61 (3%)
 Frame = +2

Query: 59  MSNTCGNCDCADTTQCVKKGYAADIIETEKSY--TVEALVGGEHDGKCKCGPNCACTDCT 232
           MS+ CG+CDCAD +QC K GY ADIIETEKSY   ++A    E+DGKCKCG +C+CTDCT
Sbjct: 1   MSDKCGSCDCADKSQCGKNGYTADIIETEKSYAMVMDAPAAAENDGKCKCGSSCSCTDCT 60

Query: 233 C 235
           C
Sbjct: 61  C 61


>gb|ADB02892.1| metallothionein-like MT-3 [Jatropha curcas]
          Length = 67

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 41/65 (63%), Positives = 49/65 (75%), Gaps = 6/65 (9%)
 Frame = +2

Query: 59  MSNTCGNCDCADTTQCVKKG--YAADIIETEKSYT----VEALVGGEHDGKCKCGPNCAC 220
           MS+TCGNCDCAD +QCVKKG  Y ADI+ETEKS+     ++   G E+DGKCKCGP+C C
Sbjct: 1   MSSTCGNCDCADKSQCVKKGSSYTADIVETEKSFVSTIVMDVPAGAENDGKCKCGPSCTC 60

Query: 221 TDCTC 235
            DC C
Sbjct: 61  VDCGC 65


>gb|ACC77568.1| type 3 metallothionein [Prosopis juliflora]
          Length = 67

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 40/65 (61%), Positives = 48/65 (73%), Gaps = 6/65 (9%)
 Frame = +2

Query: 59  MSNTCGNCDCADTTQCVKKG--YAADIIETE----KSYTVEALVGGEHDGKCKCGPNCAC 220
           MS+ CGNCDCAD +QCVKKG  Y ADII+ +    +SY +     GEHDGKCKCGP+C+C
Sbjct: 1   MSDKCGNCDCADKSQCVKKGNGYVADIIDPDNSYDESYMMAGAAAGEHDGKCKCGPSCSC 60

Query: 221 TDCTC 235
            DCTC
Sbjct: 61  VDCTC 65


Top