BLASTX nr result

ID: Coptis21_contig00028429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028429
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002886372.1| hypothetical protein ARALYDRAFT_474957 [Arab...   209   4e-52
emb|CBI34392.3| unnamed protein product [Vitis vinifera]              207   2e-51
ref|NP_176582.2| meiotic recombination protein SPO11-2 [Arabidop...   206   3e-51
ref|XP_003571458.1| PREDICTED: meiotic recombination protein SPO...   205   7e-51
ref|XP_003538691.1| PREDICTED: meiotic recombination protein SPO...   205   9e-51

>ref|XP_002886372.1| hypothetical protein ARALYDRAFT_474957 [Arabidopsis lyrata subsp.
           lyrata] gi|297332213|gb|EFH62631.1| hypothetical protein
           ARALYDRAFT_474957 [Arabidopsis lyrata subsp. lyrata]
          Length = 383

 Score =  209 bits (533), Expect = 4e-52
 Identities = 94/131 (71%), Positives = 118/131 (90%)
 Frame = -1

Query: 746 LHRISRIYPSLPILALVDWNPAGLAIICTYKYGSIGMGLEAYRYACDVKWLGLRGDDLRL 567
           LHR+S  +P+LPILALVDWNPAGLAI+CT+K+GSIGMGLEAYRYAC+VKW+GLRGDDL L
Sbjct: 253 LHRMSTTFPNLPILALVDWNPAGLAILCTFKFGSIGMGLEAYRYACNVKWIGLRGDDLNL 312

Query: 566 VPEEALAPLKPKDLQIAKSLMNSEMLQDGYKEELELMVRSCQRVEIEGLYCHGFDFLGKY 387
           +P+E+L PLKPKD QIAKSL++S++LQD Y++EL LMV++ +R EIE LYCHG+++LGKY
Sbjct: 313 IPDESLVPLKPKDSQIAKSLLSSKILQDNYRDELSLMVQTGKRAEIEALYCHGYNYLGKY 372

Query: 386 LAKKIVQNDYI 354
           +A KIVQ  YI
Sbjct: 373 IATKIVQGKYI 383


>emb|CBI34392.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score =  207 bits (526), Expect = 2e-51
 Identities = 95/131 (72%), Positives = 119/131 (90%)
 Frame = -1

Query: 746 LHRISRIYPSLPILALVDWNPAGLAIICTYKYGSIGMGLEAYRYACDVKWLGLRGDDLRL 567
           L+R+SR +P LPILALVDWNPAGLAI+CT+K+GSIGMGLEAYRYAC+VKWLGLRGDDL+L
Sbjct: 251 LYRMSRAFPDLPILALVDWNPAGLAILCTFKFGSIGMGLEAYRYACNVKWLGLRGDDLQL 310

Query: 566 VPEEALAPLKPKDLQIAKSLMNSEMLQDGYKEELELMVRSCQRVEIEGLYCHGFDFLGKY 387
           +PEE+L PLKP+DLQIAKSL +SE+L++ Y+ ELE+MV+S +R EIE LY  G++FLGKY
Sbjct: 311 IPEESLIPLKPRDLQIAKSLKSSEILEENYRNELEVMVQSGRRAEIEALYFRGYNFLGKY 370

Query: 386 LAKKIVQNDYI 354
           +AKKIVQ +Y+
Sbjct: 371 IAKKIVQANYV 381


>ref|NP_176582.2| meiotic recombination protein SPO11-2 [Arabidopsis thaliana]
           gi|75335899|sp|Q9M4A1.1|SPO12_ARATH RecName:
           Full=Meiotic recombination protein SPO11-2;
           Short=AtSPO11-2 gi|7270977|emb|CAB81545.1| putative
           topoisomerase VIA [Arabidopsis thaliana]
           gi|91806019|gb|ABE65738.1| DNA topoisomerase VIA
           [Arabidopsis thaliana] gi|332196057|gb|AEE34178.1|
           meiotic recombination protein SPO11-2 [Arabidopsis
           thaliana]
          Length = 383

 Score =  206 bits (525), Expect = 3e-51
 Identities = 94/131 (71%), Positives = 115/131 (87%)
 Frame = -1

Query: 746 LHRISRIYPSLPILALVDWNPAGLAIICTYKYGSIGMGLEAYRYACDVKWLGLRGDDLRL 567
           LHR+S  +P LPIL LVDWNPAGLAI+CT+K+GSIGMGLEAYRYAC+VKW+GLRGDDL L
Sbjct: 253 LHRMSTTFPDLPILVLVDWNPAGLAILCTFKFGSIGMGLEAYRYACNVKWIGLRGDDLNL 312

Query: 566 VPEEALAPLKPKDLQIAKSLMNSEMLQDGYKEELELMVRSCQRVEIEGLYCHGFDFLGKY 387
           +PEE+L PLKPKD QIAKSL++S++LQ+ Y EEL LMV++ +R EIE LYCHG+++LGKY
Sbjct: 313 IPEESLVPLKPKDSQIAKSLLSSKILQENYIEELSLMVQTGKRAEIEALYCHGYNYLGKY 372

Query: 386 LAKKIVQNDYI 354
           +A KIVQ  YI
Sbjct: 373 IATKIVQGKYI 383


>ref|XP_003571458.1| PREDICTED: meiotic recombination protein SPO11-2-like [Brachypodium
           distachyon]
          Length = 382

 Score =  205 bits (522), Expect = 7e-51
 Identities = 93/131 (70%), Positives = 112/131 (85%)
 Frame = -1

Query: 746 LHRISRIYPSLPILALVDWNPAGLAIICTYKYGSIGMGLEAYRYACDVKWLGLRGDDLRL 567
           LHR+S+ +P++PI ALVDWNPAGLAI+CTYKYGSI MGLE+YRYAC+VKWLG+RGDDL L
Sbjct: 252 LHRLSQTFPNMPIFALVDWNPAGLAILCTYKYGSISMGLESYRYACNVKWLGIRGDDLEL 311

Query: 566 VPEEALAPLKPKDLQIAKSLMNSEMLQDGYKEELELMVRSCQRVEIEGLYCHGFDFLGKY 387
           +P+ A   LKP+DLQIAK LM+S+ LQD ++ EL LMV   +R EIE LYCHGFDFLGKY
Sbjct: 312 IPQSAFQELKPRDLQIAKGLMSSKFLQDKHRAELALMVEMGKRAEIEALYCHGFDFLGKY 371

Query: 386 LAKKIVQNDYI 354
           +A+KIVQ DYI
Sbjct: 372 IARKIVQGDYI 382


>ref|XP_003538691.1| PREDICTED: meiotic recombination protein SPO11-2-like [Glycine max]
          Length = 382

 Score =  205 bits (521), Expect = 9e-51
 Identities = 95/131 (72%), Positives = 117/131 (89%)
 Frame = -1

Query: 746 LHRISRIYPSLPILALVDWNPAGLAIICTYKYGSIGMGLEAYRYACDVKWLGLRGDDLRL 567
           L+RIS+ +P LPILALVDWNPAGLAI+CT+K+GSIGMGLEAYRYAC+VKWLGLRG DL L
Sbjct: 252 LYRISKAFPDLPILALVDWNPAGLAILCTFKFGSIGMGLEAYRYACNVKWLGLRGHDLPL 311

Query: 566 VPEEALAPLKPKDLQIAKSLMNSEMLQDGYKEELELMVRSCQRVEIEGLYCHGFDFLGKY 387
           +P ++  PLKPKDLQIA+SLM+S +LQD YKEE+ LMV+S +R EIE LY +G+D+LGKY
Sbjct: 312 LPNQSFVPLKPKDLQIAQSLMSSGILQDNYKEEVALMVQSGRRAEIEALYFNGYDYLGKY 371

Query: 386 LAKKIVQNDYI 354
           +AKKIVQ+DY+
Sbjct: 372 IAKKIVQSDYV 382


Top