BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028427
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containi...   214   4e-54
emb|CBI21441.3| unnamed protein product [Vitis vinifera]              214   4e-54
ref|XP_002523554.1| pentatricopeptide repeat-containing protein,...   197   6e-49
ref|XP_003551036.1| PREDICTED: pentatricopeptide repeat-containi...   184   6e-45
ref|NP_001049195.1| Os03g0185200 [Oryza sativa Japonica Group] g...   152   4e-35

>ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Vitis vinifera]
          Length = 634

 Score =  214 bits (546), Expect = 4e-54
 Identities = 99/153 (64%), Positives = 127/153 (83%)
 Frame = +1

Query: 1   QMQSRGIENDAITISTVLPACDLKFGKQIHAHVRRKDFDSAVPVWNALINMYSKSGCVEA 180
           +MQ  GI N+ ITISTVLPACDLK GKQ+HA++ +  F S +PVWNALI+MYSK GC+  
Sbjct: 385 KMQRSGIMNNQITISTVLPACDLKSGKQVHAYITKNSFSSVIPVWNALIHMYSKCGCIGT 444

Query: 181 ALSVFTNMDMKDIVSWNSMIGGCGMNGNGPAALQLLREMYHSGIQPNSVTFTSALSACAH 360
           A S+F+NM  +D+VSWN+MIGG GM+G G  ALQLLR+M HS + PNSVTFTSALSAC+H
Sbjct: 445 AYSIFSNMISRDLVSWNTMIGGFGMHGLGQFALQLLRDMSHSDVCPNSVTFTSALSACSH 504

Query: 361 SGLVTEGIQLFNSLTQEYGVTPTVEHYSCVVDL 459
           SGLV EG++LF+++T+++G TP +EH+SCVVDL
Sbjct: 505 SGLVDEGMELFHTMTRDFGFTPGMEHFSCVVDL 537



 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 6/154 (3%)
 Frame = +1

Query: 1   QMQSRGIENDAITISTVLPACD----LKFGKQIHAHVRRKDFDSAVPVWNALINMYSKSG 168
           +M+ +G+  D      V  AC     L+ G Q+H  V     +  + V N+LI+MYSKSG
Sbjct: 114 EMKLKGVLPDKYVFPKVFRACGQLLWLEVGIQVHKDVVICGCEFDLQVCNSLIDMYSKSG 173

Query: 169 CVEAALSVFTNMDMKDIVSWNSMIGGCGMNGNGPAALQLLREMYHSGIQPNSVTFTSALS 348
            V +   VF  M  +D++SWNSMI G   NG    +++LL  M   G +P+ VT+ + + 
Sbjct: 174 DVGSGRRVFDEMVERDVLSWNSMISGYVCNGFLEFSVELLASMRIRGFEPDMVTWNTVMD 233

Query: 349 ACAHSGLVTEGIQLFNSLTQE--YGVTPTVEHYS 444
           A    GL  E  ++F  + +     +T  V  YS
Sbjct: 234 AYCRMGLCDEAWEIFEQIKEPNIISLTTLVSGYS 267



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
 Frame = +1

Query: 1   QMQSRGIE-NDAITISTVLPACD----LKFGKQIHAH-VRRKDFDSAVP-VWNALINMYS 159
           +M SR +   D  ++S+VL +C     L  G++IH + +R  D  S       AL+ MY 
Sbjct: 281 EMMSRRVAFPDLDSLSSVLVSCRHLGALVCGQEIHGYGIRSVDSSSFYKSAGAALLTMYV 340

Query: 160 KSGCVEAALSVFTNMDMKDIVSWNSMIGGCGMNGNGPAALQLLREMYHSGIQPNSVTFTS 339
           K   ++ AL+VF  MD  D+V+WN+MI G      G  AL+   +M  SGI  N +T ++
Sbjct: 341 KCKRIQDALNVFELMDRFDVVTWNAMILGFVDLEMGHLALECFSKMQRSGIMNNQITIST 400

Query: 340 ALSAC 354
            L AC
Sbjct: 401 VLPAC 405


>emb|CBI21441.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  214 bits (546), Expect = 4e-54
 Identities = 99/153 (64%), Positives = 127/153 (83%)
 Frame = +1

Query: 1    QMQSRGIENDAITISTVLPACDLKFGKQIHAHVRRKDFDSAVPVWNALINMYSKSGCVEA 180
            +MQ  GI N+ ITISTVLPACDLK GKQ+HA++ +  F S +PVWNALI+MYSK GC+  
Sbjct: 583  KMQRSGIMNNQITISTVLPACDLKSGKQVHAYITKNSFSSVIPVWNALIHMYSKCGCIGT 642

Query: 181  ALSVFTNMDMKDIVSWNSMIGGCGMNGNGPAALQLLREMYHSGIQPNSVTFTSALSACAH 360
            A S+F+NM  +D+VSWN+MIGG GM+G G  ALQLLR+M HS + PNSVTFTSALSAC+H
Sbjct: 643  AYSIFSNMISRDLVSWNTMIGGFGMHGLGQFALQLLRDMSHSDVCPNSVTFTSALSACSH 702

Query: 361  SGLVTEGIQLFNSLTQEYGVTPTVEHYSCVVDL 459
            SGLV EG++LF+++T+++G TP +EH+SCVVDL
Sbjct: 703  SGLVDEGMELFHTMTRDFGFTPGMEHFSCVVDL 735



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 47/151 (31%), Positives = 67/151 (44%), Gaps = 33/151 (21%)
 Frame = +1

Query: 1   QMQSRGIENDAITISTVLPACD----LKFGKQIHAHVRRKDFDSAVPVWNALINMYSKSG 168
           +M+ +G+  D      V  AC     L+ G Q+H  V     +  + V N+LI+MYSKSG
Sbjct: 453 EMKLKGVLPDKYVFPKVFRACGQLLWLEVGIQVHKDVVICGCEFDLQVCNSLIDMYSKSG 512

Query: 169 CV-----------------------------EAALSVFTNMDMKDIVSWNSMIGGCGMNG 261
            V                             + AL+VF  MD  D+V+WN+MI G     
Sbjct: 513 DVGSGRRVFDEMVERDVLSWNSMISGYCKRIQDALNVFELMDRFDVVTWNAMILGFVDLE 572

Query: 262 NGPAALQLLREMYHSGIQPNSVTFTSALSAC 354
            G  AL+   +M  SGI  N +T ++ L AC
Sbjct: 573 MGHLALECFSKMQRSGIMNNQITISTVLPAC 603


>ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537116|gb|EEF38749.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 611

 Score =  197 bits (502), Expect = 6e-49
 Identities = 92/154 (59%), Positives = 120/154 (77%), Gaps = 1/154 (0%)
 Frame = +1

Query: 1   QMQSRGIENDAITISTVLPACDLKFGKQIHAHVRRK-DFDSAVPVWNALINMYSKSGCVE 177
           +MQ   I+ND  TIST+LP CDL++G  IHA+VR+     S V VWNA+I+MY K GCV 
Sbjct: 357 EMQRMDIKNDQTTISTILPVCDLQYGNPIHAYVRKSITLSSVVTVWNAVIHMYCKCGCVR 416

Query: 178 AALSVFTNMDMKDIVSWNSMIGGCGMNGNGPAALQLLREMYHSGIQPNSVTFTSALSACA 357
           +A ++F +M  KD+VSWN+MIGG GM+G+G AAL+LL+EM  SGI PNS TFTS LSAC+
Sbjct: 417 SAYTIFCSMPNKDVVSWNTMIGGFGMHGHGQAALKLLKEMILSGIFPNSTTFTSVLSACS 476

Query: 358 HSGLVTEGIQLFNSLTQEYGVTPTVEHYSCVVDL 459
           HSGLV EG +LF S+T++Y +TP +EHYSC+VD+
Sbjct: 477 HSGLVDEGFRLFRSMTEDYSITPRMEHYSCIVDM 510



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
 Frame = +1

Query: 28  DAITISTVLPACD----LKFGKQIHAHVRRKDFDSAVPVWNALINMYSKSGCVEAALSVF 195
           D      VL AC      + G  IH  V     +S + V N+LI+MY K G   +A  VF
Sbjct: 95  DNYVFPKVLRACTQLLWFEGGIWIHKDVIVCGCESNLQVCNSLIDMYVKCGNARSARLVF 154

Query: 196 TNMDMKDIVSWNSMIGGCGMNGNGPAALQLLREMYHSGIQPNSVTFTSALSACAHSGLVT 375
             M+ +D+ SWNSMI G   NG    A++LL  M   G +P+ VT+ + + A    G   
Sbjct: 155 EEMEERDLFSWNSMISGYVSNGLADLAVELLNCMRLDGFEPDVVTWNTLMDAYCQMGRFD 214

Query: 376 EGIQLFNSLTQ 408
           E  ++   + Q
Sbjct: 215 EAWEVLKQIEQ 225



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
 Frame = +1

Query: 19  IENDAITISTVLPACD----LKFGKQIHAHVRRKDFDSAV--PVWNALINMYSKSGCVEA 180
           +  D   + +VL +C     L+ GK+IH +  + + ++        AL+ MY+K G ++ 
Sbjct: 260 VSPDLDCLCSVLVSCRHIGALRSGKEIHGYGTKMETNTVFYSSAGAALLTMYAKCGRIQD 319

Query: 181 ALSVFTNMDMKDIVSWNSMIGGCGMNGNGPAALQLLREMYHSGIQPNSVTFTSALSAC 354
           A++VF  MD  DIV+WN+MI G      G  A++  REM    I+ +  T ++ L  C
Sbjct: 320 AINVFELMDKSDIVTWNAMILGFVELDLGKQAIECFREMQRMDIKNDQTTISTILPVC 377


>ref|XP_003551036.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Glycine max]
          Length = 619

 Score =  184 bits (467), Expect = 6e-45
 Identities = 85/153 (55%), Positives = 119/153 (77%)
 Frame = +1

Query: 1   QMQSRGIENDAITISTVLPACDLKFGKQIHAHVRRKDFDSAVPVWNALINMYSKSGCVEA 180
           +MQ RG+  D  TIS++LP CDL+ GK+IHA+VR+ +F   +PV+NALI+MYS  GC+  
Sbjct: 366 EMQGRGVGIDGRTISSILPVCDLRCGKEIHAYVRKCNFSGVIPVYNALIHMYSIRGCIAY 425

Query: 181 ALSVFTNMDMKDIVSWNSMIGGCGMNGNGPAALQLLREMYHSGIQPNSVTFTSALSACAH 360
           A SVF+ M  +D+VSWN++IGG G +G G  AL+LL+EM  SG++P+ VTF+ ALSAC+H
Sbjct: 426 AYSVFSTMVARDLVSWNTIIGGFGTHGLGQTALELLQEMSGSGVRPDLVTFSCALSACSH 485

Query: 361 SGLVTEGIQLFNSLTQEYGVTPTVEHYSCVVDL 459
           SGLV EGI+LF  +T+++ +TP  EH+SCVVD+
Sbjct: 486 SGLVNEGIELFYRMTKDFSMTPAREHFSCVVDM 518



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 6/150 (4%)
 Frame = +1

Query: 1   QMQSRGIENDAITISTVLPACD----LKFGKQIHAHVRRKDFDSAVPVWNALINMYSKSG 168
           +++  G+  D      VL AC        G+ +H  V     +S + V N++++MYSK G
Sbjct: 93  ELRRNGVVPDGYVFPKVLKACAQLSRFGSGRGVHKDVVVFGEESNLQVRNSVLDMYSKCG 152

Query: 169 CVEAALSVFTNMDMKDIVSWNSMIGGCGMNGNGPAALQLLREMYHS--GIQPNSVTFTSA 342
            V +A  VF  M  +D+ SWNSM+ G   NG    A+++L  M     G +P+ VT+ + 
Sbjct: 153 DVGSARQVFDEMSERDVFSWNSMMSGYVWNGLPHKAVEVLGVMKKDGCGCEPDVVTWNTV 212

Query: 343 LSACAHSGLVTEGIQLFNSLTQEYGVTPTV 432
           + A    G   E  ++F  +     ++ T+
Sbjct: 213 MDAYCRMGQCCEASRVFGEIEDPNVISWTI 242


>ref|NP_001049195.1| Os03g0185200 [Oryza sativa Japonica Group]
           gi|113547666|dbj|BAF11109.1| Os03g0185200 [Oryza sativa
           Japonica Group]
          Length = 473

 Score =  152 bits (383), Expect = 4e-35
 Identities = 74/155 (47%), Positives = 102/155 (65%), Gaps = 2/155 (1%)
 Frame = +1

Query: 1   QMQSRGIENDAITISTVLPACDLKFGKQIHAHVRRKDFDSA--VPVWNALINMYSKSGCV 174
           +M++RG+  +A T   VL ACDL+ G+Q+H H+ R   DS     +WNAL+NMYS+ GCV
Sbjct: 219 EMRARGVRGNARTAVAVLGACDLESGRQVHGHMVRNHGDSGSNAILWNALMNMYSRVGCV 278

Query: 175 EAALSVFTNMDMKDIVSWNSMIGGCGMNGNGPAALQLLREMYHSGIQPNSVTFTSALSAC 354
           + A  VF  ++ KD+VSWN MIG    NG+G  AL+L+  M   G+QP+SVTFT+ L AC
Sbjct: 279 DNAEHVFFEIERKDVVSWNVMIGAFAKNGHGERALELVDAMLRCGMQPDSVTFTTLLMAC 338

Query: 355 AHSGLVTEGIQLFNSLTQEYGVTPTVEHYSCVVDL 459
            H GLV EG+ LF    +   + PT+E  +C+VDL
Sbjct: 339 CHCGLVDEGLALFERFVENSALIPTMEQCACIVDL 373



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
 Frame = +1

Query: 139 ALINMYSKSGCVEAALSVFTNMDMKDIVSWNSMIG---GCGMNGNGPAALQLLREMYHSG 309
           AL+ +Y+  G V AA  +F  MD +D+VSWN+MIG   G GMNG    A    REM   G
Sbjct: 168 ALVALYAMCGRVSAAKRIFDRMDGEDVVSWNAMIGGFAGAGMNGE---AWDCFREMRARG 224

Query: 310 IQPNSVTFTSALSACAHSGLVTEGIQLFNSLTQEYG 417
           ++ N+ T  + L AC     +  G Q+   + + +G
Sbjct: 225 VRGNARTAVAVLGACD----LESGRQVHGHMVRNHG 256