BLASTX nr result

ID: Coptis21_contig00028423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028423
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|2...   191   4e-47
ref|XP_003544291.1| PREDICTED: ABC transporter G family member 3...   185   3e-45
ref|XP_003615634.1| Pleiotropic drug resistance ABC transporter ...   185   3e-45
ref|XP_004160202.1| PREDICTED: ABC transporter G family member 3...   184   8e-45
ref|XP_004143156.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   184   8e-45

>ref|XP_002299812.1| predicted protein [Populus trichocarpa] gi|222847070|gb|EEE84617.1|
           predicted protein [Populus trichocarpa]
          Length = 1432

 Score =  191 bits (486), Expect = 4e-47
 Identities = 94/105 (89%), Positives = 100/105 (95%)
 Frame = +2

Query: 2   FMKASSVGGTTHSLATDYILKVLGLDVCAETIVGNDMLRGVSGGQRKRVTTGEVIVGPRK 181
           FMKASSVGG  HS++TDY+LKVLGLDVC+ET+VGNDMLRGVSGGQRKRVTTGE+IVGPRK
Sbjct: 291 FMKASSVGGKKHSISTDYVLKVLGLDVCSETVVGNDMLRGVSGGQRKRVTTGEMIVGPRK 350

Query: 182 ILFMDEISTGLDSSTTYQIVKCIRNFVHLMEGTVLMALLQPAPET 316
            LFMDEISTGLDSSTTYQIVKCI NFVHLME TVLMALLQPAPET
Sbjct: 351 TLFMDEISTGLDSSTTYQIVKCIGNFVHLMEATVLMALLQPAPET 395


>ref|XP_003544291.1| PREDICTED: ABC transporter G family member 31-like [Glycine max]
          Length = 1440

 Score =  185 bits (470), Expect = 3e-45
 Identities = 92/105 (87%), Positives = 98/105 (93%)
 Frame = +2

Query: 2   FMKASSVGGTTHSLATDYILKVLGLDVCAETIVGNDMLRGVSGGQRKRVTTGEVIVGPRK 181
           FMKASSVGG  HS+ TDYILKVLGLD+C++TIVGNDMLRGVSGGQRKRVTTGE+IVGPRK
Sbjct: 290 FMKASSVGGKKHSVNTDYILKVLGLDICSDTIVGNDMLRGVSGGQRKRVTTGEMIVGPRK 349

Query: 182 ILFMDEISTGLDSSTTYQIVKCIRNFVHLMEGTVLMALLQPAPET 316
            LFMDEISTGLDSSTT+ IVKCIRNFVH ME TVLMALLQPAPET
Sbjct: 350 TLFMDEISTGLDSSTTFLIVKCIRNFVHQMEATVLMALLQPAPET 394


>ref|XP_003615634.1| Pleiotropic drug resistance ABC transporter family protein
           [Medicago truncatula] gi|355516969|gb|AES98592.1|
           Pleiotropic drug resistance ABC transporter family
           protein [Medicago truncatula]
          Length = 1487

 Score =  185 bits (470), Expect = 3e-45
 Identities = 92/105 (87%), Positives = 98/105 (93%)
 Frame = +2

Query: 2   FMKASSVGGTTHSLATDYILKVLGLDVCAETIVGNDMLRGVSGGQRKRVTTGEVIVGPRK 181
           FMKASSVGG  HS+ TDYILKVLGLDVC++TIVGN+M RGVSGGQRKRVTTGE+IVGPRK
Sbjct: 287 FMKASSVGGKKHSVNTDYILKVLGLDVCSDTIVGNEMTRGVSGGQRKRVTTGEMIVGPRK 346

Query: 182 ILFMDEISTGLDSSTTYQIVKCIRNFVHLMEGTVLMALLQPAPET 316
            LFMDEISTGLDSSTTYQIVKCI+NFVH ME TVLMALLQPAPET
Sbjct: 347 TLFMDEISTGLDSSTTYQIVKCIKNFVHQMEATVLMALLQPAPET 391


>ref|XP_004160202.1| PREDICTED: ABC transporter G family member 31-like [Cucumis
           sativus]
          Length = 743

 Score =  184 bits (466), Expect = 8e-45
 Identities = 90/105 (85%), Positives = 99/105 (94%)
 Frame = +2

Query: 2   FMKASSVGGTTHSLATDYILKVLGLDVCAETIVGNDMLRGVSGGQRKRVTTGEVIVGPRK 181
           FMKASSVGG  HS+ TDYILKVLGLDVC+ET+VG+DM+RGVSGGQRKRVT+GE+IVGPRK
Sbjct: 292 FMKASSVGGKKHSVLTDYILKVLGLDVCSETLVGSDMVRGVSGGQRKRVTSGEMIVGPRK 351

Query: 182 ILFMDEISTGLDSSTTYQIVKCIRNFVHLMEGTVLMALLQPAPET 316
            LFMDEISTGLDSSTT+QIVKC+RNFVH ME TVLMALLQPAPET
Sbjct: 352 TLFMDEISTGLDSSTTFQIVKCLRNFVHQMEATVLMALLQPAPET 396


>ref|XP_004143156.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member
           31-like [Cucumis sativus]
          Length = 1486

 Score =  184 bits (466), Expect = 8e-45
 Identities = 90/105 (85%), Positives = 99/105 (94%)
 Frame = +2

Query: 2   FMKASSVGGTTHSLATDYILKVLGLDVCAETIVGNDMLRGVSGGQRKRVTTGEVIVGPRK 181
           FMKASSVGG  HS+ TDYILKVLGLDVC+ET+VG+DM+RGVSGGQRKRVT+GE+IVGPRK
Sbjct: 292 FMKASSVGGKKHSVLTDYILKVLGLDVCSETLVGSDMVRGVSGGQRKRVTSGEMIVGPRK 351

Query: 182 ILFMDEISTGLDSSTTYQIVKCIRNFVHLMEGTVLMALLQPAPET 316
            LFMDEISTGLDSSTT+QIVKC+RNFVH ME TVLMALLQPAPET
Sbjct: 352 TLFMDEISTGLDSSTTFQIVKCLRNFVHQMEATVLMALLQPAPET 396


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