BLASTX nr result
ID: Coptis21_contig00028419
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00028419 (407 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vi... 75 4e-12 ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cuc... 74 2e-11 ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cuc... 73 2e-11 ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|2... 64 1e-08 gb|ABK92768.1| unknown [Populus trichocarpa] 64 1e-08 >ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vinifera] gi|296088512|emb|CBI37503.3| unnamed protein product [Vitis vinifera] Length = 378 Score = 75.5 bits (184), Expect = 4e-12 Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 4/127 (3%) Frame = +1 Query: 10 KNILGFLPDEVVVITSSNGILLCRGIFEHHGSNHCSRERMKIRYNVILYVCNPFTKEWTT 189 + I FLP++VV++ S NG++ CR +F + ++VCNP K+W Sbjct: 82 QTIFSFLPEDVVILGSCNGLVCCRSVFPSPDPS--------------IFVCNPSNKQWIR 127 Query: 190 LKPRGKYKNGCCYGFAYNPFSS-VGSP-NFEVVMV-QPPLQLGKDP-FKFKIYTSTTGTW 357 L K YG A+NPF S + P NF+VV V Q + D F F+IY+S G W Sbjct: 128 LLETTPDKES-SYGLAFNPFQSPIDMPTNFKVVRVSQAQTDMDDDSYFSFEIYSSQAGAW 186 Query: 358 RTSKEVC 378 + SKE+C Sbjct: 187 KKSKEIC 193 >ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus] Length = 398 Score = 73.6 bits (179), Expect = 2e-11 Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 6/138 (4%) Frame = +1 Query: 10 KNILGFLPDEVVVITSSNGILLCRGIFEHHGSNHCSRERMKIRYNVILYVCNPFTKEWTT 189 K + GFLP++VV++ S NG++ CR C R + ++ +YVCNP K+W + Sbjct: 83 KMVFGFLPEDVVILQSCNGLVCCRS---------CFRTQHSTTHSTTIYVCNPLFKKWVS 133 Query: 190 LKPRGKYKNGCCYGFAYNPFSSV--GSPNFEVVMVQPPLQLGKDP----FKFKIYTSTTG 351 + + + A++P + NF+VV +Q QL + + F+IY+S TG Sbjct: 134 FEV-AQLDSFSSIALAFDPILDPVNTATNFKVVRIQ---QLENEQEEMYYTFEIYSSETG 189 Query: 352 TWRTSKEVCTLPDRLLSH 405 TW+ S EVC LL++ Sbjct: 190 TWKESSEVCYSDGNLLNN 207 >ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus] Length = 399 Score = 73.2 bits (178), Expect = 2e-11 Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 6/138 (4%) Frame = +1 Query: 10 KNILGFLPDEVVVITSSNGILLCRGIFEHHGSNHCSRERMKIRYNVILYVCNPFTKEWTT 189 K + GFLP++VV++ S NG++ CR C R + ++ +YVCNP K+W + Sbjct: 83 KMVFGFLPEDVVILQSCNGLVCCRS---------CFRTQHSTTHSTTIYVCNPLFKKWVS 133 Query: 190 LKPRGKYKNGCCYGFAYNPFSSV--GSPNFEVVMVQPPLQLGKDP----FKFKIYTSTTG 351 + + + A++P + NF+VV +Q QL + + F+IY+S TG Sbjct: 134 FEV-AQLDSFSSIALAFDPILDPVNTATNFKVVRIQ---QLENEQEEMYYTFEIYSSETG 189 Query: 352 TWRTSKEVCTLPDRLLSH 405 TW+ S EVC LL + Sbjct: 190 TWKESSEVCYSDGNLLKN 207 >ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|222870635|gb|EEF07766.1| predicted protein [Populus trichocarpa] Length = 424 Score = 64.3 bits (155), Expect = 1e-08 Identities = 42/126 (33%), Positives = 59/126 (46%), Gaps = 3/126 (2%) Frame = +1 Query: 10 KNILGFLPDEVVVITSSNGILLCRGIFEHHGSNHCSRERMKIRYNVILYVCNPFTKEWTT 189 +++ FLP +VVV+ NG++ CR + + +YVCNP EW Sbjct: 85 QDVFAFLPQDVVVLALCNGLVCCRSCYPFE--------------DPAIYVCNPLNSEWWK 130 Query: 190 LKPRGKYKNGCCYGFAYNPFS--SVGSPNFEVVMV-QPPLQLGKDPFKFKIYTSTTGTWR 360 L + K A+NPF SV NF+VV Q + + F F+IY S T W+ Sbjct: 131 LDWKEPGKESFI-ALAFNPFQDISVNLTNFKVVRPRQFETEQEEAYFSFEIYASRTRNWK 189 Query: 361 TSKEVC 378 SKEVC Sbjct: 190 LSKEVC 195 >gb|ABK92768.1| unknown [Populus trichocarpa] Length = 384 Score = 64.3 bits (155), Expect = 1e-08 Identities = 42/126 (33%), Positives = 59/126 (46%), Gaps = 3/126 (2%) Frame = +1 Query: 10 KNILGFLPDEVVVITSSNGILLCRGIFEHHGSNHCSRERMKIRYNVILYVCNPFTKEWTT 189 +++ FLP +VVV+ NG++ CR + + +YVCNP EW Sbjct: 85 QDVFAFLPQDVVVLALCNGLVCCRSCYPFE--------------DPAIYVCNPLNSEWWK 130 Query: 190 LKPRGKYKNGCCYGFAYNPFS--SVGSPNFEVVMV-QPPLQLGKDPFKFKIYTSTTGTWR 360 L + K A+NPF SV NF+VV Q + + F F+IY S T W+ Sbjct: 131 LDWKEPGKESFI-ALAFNPFQDISVNLTNFKVVRPRQFETEQEEAYFSFEIYASRTRNWK 189 Query: 361 TSKEVC 378 SKEVC Sbjct: 190 LSKEVC 195