BLASTX nr result
ID: Coptis21_contig00028405
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00028405
(1102 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277046.2| PREDICTED: telomerase Cajal body protein 1-l... 526 e-147
ref|XP_002525611.1| WD-repeat protein, putative [Ricinus communi... 520 e-145
ref|XP_004146583.1| PREDICTED: telomerase Cajal body protein 1-l... 518 e-144
ref|XP_002316658.1| predicted protein [Populus trichocarpa] gi|2... 518 e-144
ref|XP_004158026.1| PREDICTED: telomerase Cajal body protein 1-l... 517 e-144
>ref|XP_002277046.2| PREDICTED: telomerase Cajal body protein 1-like [Vitis vinifera]
gi|302144185|emb|CBI23312.3| unnamed protein product
[Vitis vinifera]
Length = 407
Score = 526 bits (1355), Expect = e-147
Identities = 243/319 (76%), Positives = 282/319 (88%), Gaps = 2/319 (0%)
Frame = -2
Query: 1101 TLRKFNLPDN-EDTCPPSAPGDSYVADLVVSEGESVYDYCWYPYMSASDPATCVFASTTR 925
TLR F+LP+N D + DSY A +VVSEGES++D+CWYPYMSASDP TCVFASTTR
Sbjct: 86 TLRLFSLPENGSDHHESACDEDSYAASIVVSEGESIHDHCWYPYMSASDPVTCVFASTTR 145
Query: 924 DHPLHLWDAVSGQLRGTYRAYDAMDEISAAFSAAFNPSGTKLFAGYNKSVRIFDIHRPGR 745
DHP+HLWDA SG+LR TYRAYDA+DEI+ AFS AFNP+GTK+FAGYNK +R+FD+HRPGR
Sbjct: 146 DHPIHLWDAASGELRCTYRAYDAVDEITTAFSIAFNPAGTKIFAGYNKCLRVFDVHRPGR 205
Query: 744 DFEQYSTLQGNKEGQSGIISTIAFCPSNTGMLAAGSYGQTTAIYSEGNMELLYVLHGQEG 565
DFEQYST++GNKEGQSGII+ IAFCP++TGMLA GSY +TTAIY E NMELLY+LHGQEG
Sbjct: 206 DFEQYSTIKGNKEGQSGIIAAIAFCPTHTGMLATGSYSRTTAIYREDNMELLYILHGQEG 265
Query: 564 GVTHVQFSRDGNYLYTGGRKDPYILCWDIRNTVSIVYKLYRSSESTNQRILFDIEPSGRH 385
GVT+VQFS+DGN+LYTGGRKDPYILCWDIRNTV+ VYKLYRS+E+TNQRI FDIEP GRH
Sbjct: 266 GVTNVQFSKDGNFLYTGGRKDPYILCWDIRNTVNTVYKLYRSTETTNQRIFFDIEPGGRH 325
Query: 384 LGTGGQDGQIHIYDLQTGQWVTSFQAASDTVNGFCFHPFLPIAASSSGHRRFGMPD-DLD 208
LGTGGQDG +HIYDLQTGQW++ FQAASDT+NGF FHPFLP+AASSSGHRRFG+P+ + D
Sbjct: 326 LGTGGQDGLVHIYDLQTGQWISCFQAASDTINGFSFHPFLPMAASSSGHRRFGIPESNED 385
Query: 207 EGFSLSDEENCASVWSFFY 151
+S +ENCASVWSF Y
Sbjct: 386 LSLGISGDENCASVWSFSY 404
>ref|XP_002525611.1| WD-repeat protein, putative [Ricinus communis]
gi|223535047|gb|EEF36729.1| WD-repeat protein, putative
[Ricinus communis]
Length = 422
Score = 520 bits (1339), Expect = e-145
Identities = 242/350 (69%), Positives = 291/350 (83%), Gaps = 5/350 (1%)
Frame = -2
Query: 1101 TLRKFNLPD---NEDT--CPPSAPGDSYVADLVVSEGESVYDYCWYPYMSASDPATCVFA 937
TLR F+LPD ++D+ C DSY + +VV EGESVYD+CWYPYM+ASDP +CVFA
Sbjct: 73 TLRVFSLPDYCSSDDSIACSLDTDQDSYDSSIVVKEGESVYDFCWYPYMTASDPVSCVFA 132
Query: 936 STTRDHPLHLWDAVSGQLRGTYRAYDAMDEISAAFSAAFNPSGTKLFAGYNKSVRIFDIH 757
STTRDHP+HLWDA SG LR TYRAYDA+DEI+AAFS +FNP+G K+FAGYNKS+R+FDIH
Sbjct: 133 STTRDHPIHLWDASSGLLRCTYRAYDAVDEITAAFSISFNPAGNKMFAGYNKSIRVFDIH 192
Query: 756 RPGRDFEQYSTLQGNKEGQSGIISTIAFCPSNTGMLAAGSYGQTTAIYSEGNMELLYVLH 577
RPGR FEQ+STLQGNKEGQ+GIIS+IAFCP+++GMLA GSY TTAI+ E NMELLYVLH
Sbjct: 193 RPGRVFEQHSTLQGNKEGQTGIISSIAFCPTHSGMLATGSYSHTTAIFREDNMELLYVLH 252
Query: 576 GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDIRNTVSIVYKLYRSSESTNQRILFDIEP 397
GQEGG+TH+QFSRDGNYLYTGGRKDPYILCWD+R T +VYKLYRS+E TNQRILFD+EP
Sbjct: 253 GQEGGITHIQFSRDGNYLYTGGRKDPYILCWDMRKTAEVVYKLYRSTEQTNQRILFDVEP 312
Query: 396 SGRHLGTGGQDGQIHIYDLQTGQWVTSFQAASDTVNGFCFHPFLPIAASSSGHRRFGMPD 217
GR+L TGGQDG +H+YDLQ+GQW++ FQAA+DTVNGF FHP LP+AASSSGHRRF +PD
Sbjct: 313 YGRYLATGGQDGLVHVYDLQSGQWISGFQAAADTVNGFSFHPILPMAASSSGHRRFQVPD 372
Query: 216 DLDEGFSLSDEENCASVWSFFYSPIADNEGNIDCHDSNTPIESEDIRKDS 67
D E L +ENCA+VWSF Y+ +N NI + N+ E++ I +D+
Sbjct: 373 DGPEDLCLHGDENCATVWSFSYASAVENGANIHGGEFNSQSENDMIHQDT 422
>ref|XP_004146583.1| PREDICTED: telomerase Cajal body protein 1-like [Cucumis sativus]
Length = 417
Score = 518 bits (1334), Expect = e-144
Identities = 242/317 (76%), Positives = 276/317 (87%), Gaps = 2/317 (0%)
Frame = -2
Query: 1101 TLRKFNLPDNED--TCPPSAPGDSYVADLVVSEGESVYDYCWYPYMSASDPATCVFASTT 928
+LR FNLPD D + +A DS+ ++LVV EGESVYD+CWYPYMSASDP TCVFASTT
Sbjct: 87 SLRIFNLPDYGDDVSVNVAAEEDSFTSNLVVGEGESVYDFCWYPYMSASDPVTCVFASTT 146
Query: 927 RDHPLHLWDAVSGQLRGTYRAYDAMDEISAAFSAAFNPSGTKLFAGYNKSVRIFDIHRPG 748
RDHP+HLWDA SG+LR TYRAYDAMDEI+AAFS AFNP+GTK+FAGYNK VRIFD+HRPG
Sbjct: 147 RDHPIHLWDAASGELRCTYRAYDAMDEITAAFSIAFNPAGTKIFAGYNKLVRIFDLHRPG 206
Query: 747 RDFEQYSTLQGNKEGQSGIISTIAFCPSNTGMLAAGSYGQTTAIYSEGNMELLYVLHGQE 568
RDF Q+STLQGNKEGQ+GIIS IAF P+++GMLA GSY QTT IY E NMELLYVLHGQE
Sbjct: 207 RDFGQHSTLQGNKEGQTGIISAIAFSPTHSGMLALGSYSQTTGIYREDNMELLYVLHGQE 266
Query: 567 GGVTHVQFSRDGNYLYTGGRKDPYILCWDIRNTVSIVYKLYRSSESTNQRILFDIEPSGR 388
GG+TH+QFS+DGNYLYTGGRKDPYILCWDIR +V +VYKLYRSSE+TNQRI FDIEP G+
Sbjct: 267 GGITHIQFSKDGNYLYTGGRKDPYILCWDIRKSVDVVYKLYRSSENTNQRIFFDIEPCGQ 326
Query: 387 HLGTGGQDGQIHIYDLQTGQWVTSFQAASDTVNGFCFHPFLPIAASSSGHRRFGMPDDLD 208
HLGTGGQDG +H+YDLQTGQWVTSFQAA DTVNGF FHP++P+ +SSGHRRF PD+ D
Sbjct: 327 HLGTGGQDGFVHVYDLQTGQWVTSFQAAQDTVNGFSFHPYMPMTVTSSGHRRFIGPDNDD 386
Query: 207 EGFSLSDEENCASVWSF 157
E LS +ENCAS+WSF
Sbjct: 387 EDLCLSGDENCASLWSF 403
>ref|XP_002316658.1| predicted protein [Populus trichocarpa] gi|222859723|gb|EEE97270.1|
predicted protein [Populus trichocarpa]
Length = 374
Score = 518 bits (1334), Expect = e-144
Identities = 241/320 (75%), Positives = 270/320 (84%), Gaps = 5/320 (1%)
Frame = -2
Query: 1101 TLRKFNLPDN-----EDTCPPSAPGDSYVADLVVSEGESVYDYCWYPYMSASDPATCVFA 937
TL F+LPDN D C + DSY A L+V EGESVYDYCWYPYM+ASDP +CVFA
Sbjct: 54 TLHSFSLPDNGSGSDADGCCLAIDEDSYDASLIVKEGESVYDYCWYPYMTASDPVSCVFA 113
Query: 936 STTRDHPLHLWDAVSGQLRGTYRAYDAMDEISAAFSAAFNPSGTKLFAGYNKSVRIFDIH 757
+TTRDHP+HLWDA SG LR TYRAYDA+DEI+AA S AFNP+GTK+FAGYNKS+R+FDIH
Sbjct: 114 TTTRDHPIHLWDATSGLLRCTYRAYDAVDEITAAISIAFNPAGTKIFAGYNKSIRVFDIH 173
Query: 756 RPGRDFEQYSTLQGNKEGQSGIISTIAFCPSNTGMLAAGSYGQTTAIYSEGNMELLYVLH 577
RPGRDF QYST+QGNKEGQ+GIIS +AF P++TGMLA GSY QTTAIY E NMELLYVLH
Sbjct: 174 RPGRDFAQYSTIQGNKEGQTGIISAVAFSPTHTGMLATGSYSQTTAIYREDNMELLYVLH 233
Query: 576 GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDIRNTVSIVYKLYRSSESTNQRILFDIEP 397
GQEGG+THVQFS+DGNYLYTGGRKDPYILCWDIR V +VYKLYRSSE TNQRI FDIEP
Sbjct: 234 GQEGGITHVQFSKDGNYLYTGGRKDPYILCWDIRKAVEVVYKLYRSSEYTNQRIFFDIEP 293
Query: 396 SGRHLGTGGQDGQIHIYDLQTGQWVTSFQAASDTVNGFCFHPFLPIAASSSGHRRFGMPD 217
GRHL TGGQDG +HIYDLQ GQW++ FQAA+DTVNGF FHPFLP+A SSSGHRRF +PD
Sbjct: 294 LGRHLATGGQDGLVHIYDLQNGQWISGFQAATDTVNGFAFHPFLPMAVSSSGHRRFKVPD 353
Query: 216 DLDEGFSLSDEENCASVWSF 157
DE L+ ENCASVW+F
Sbjct: 354 GCDENLPLTGYENCASVWNF 373
>ref|XP_004158026.1| PREDICTED: telomerase Cajal body protein 1-like [Cucumis sativus]
Length = 417
Score = 517 bits (1331), Expect = e-144
Identities = 241/317 (76%), Positives = 276/317 (87%), Gaps = 2/317 (0%)
Frame = -2
Query: 1101 TLRKFNLPDNED--TCPPSAPGDSYVADLVVSEGESVYDYCWYPYMSASDPATCVFASTT 928
+LR FNLPD D + +A DS+ ++LVV EGESVYD+CWYPYMSASDP TCVFASTT
Sbjct: 87 SLRIFNLPDYGDDVSVNVAAEEDSFTSNLVVGEGESVYDFCWYPYMSASDPVTCVFASTT 146
Query: 927 RDHPLHLWDAVSGQLRGTYRAYDAMDEISAAFSAAFNPSGTKLFAGYNKSVRIFDIHRPG 748
RDHP+HLWDA SG+LR TYRAYDAMDEI+AAFS AFNP+GTK+F+GYNK VRIFD+HRPG
Sbjct: 147 RDHPIHLWDAASGELRCTYRAYDAMDEITAAFSIAFNPAGTKIFSGYNKLVRIFDLHRPG 206
Query: 747 RDFEQYSTLQGNKEGQSGIISTIAFCPSNTGMLAAGSYGQTTAIYSEGNMELLYVLHGQE 568
RDF Q+STLQGNKEGQ+GIIS IAF P+++GMLA GSY QTT IY E NMELLYVLHGQE
Sbjct: 207 RDFGQHSTLQGNKEGQTGIISAIAFSPTHSGMLALGSYSQTTGIYREDNMELLYVLHGQE 266
Query: 567 GGVTHVQFSRDGNYLYTGGRKDPYILCWDIRNTVSIVYKLYRSSESTNQRILFDIEPSGR 388
GG+TH+QFS+DGNYLYTGGRKDPYILCWDIR +V +VYKLYRSSE+TNQRI FDIEP G+
Sbjct: 267 GGITHIQFSKDGNYLYTGGRKDPYILCWDIRKSVDVVYKLYRSSENTNQRIFFDIEPCGQ 326
Query: 387 HLGTGGQDGQIHIYDLQTGQWVTSFQAASDTVNGFCFHPFLPIAASSSGHRRFGMPDDLD 208
HLGTGGQDG +H+YDLQTGQWVTSFQAA DTVNGF FHP++P+ +SSGHRRF PD+ D
Sbjct: 327 HLGTGGQDGFVHVYDLQTGQWVTSFQAAQDTVNGFSFHPYMPMTVTSSGHRRFIGPDNDD 386
Query: 207 EGFSLSDEENCASVWSF 157
E LS +ENCAS+WSF
Sbjct: 387 EDLCLSGDENCASLWSF 403