BLASTX nr result

ID: Coptis21_contig00028405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028405
         (1102 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277046.2| PREDICTED: telomerase Cajal body protein 1-l...   526   e-147
ref|XP_002525611.1| WD-repeat protein, putative [Ricinus communi...   520   e-145
ref|XP_004146583.1| PREDICTED: telomerase Cajal body protein 1-l...   518   e-144
ref|XP_002316658.1| predicted protein [Populus trichocarpa] gi|2...   518   e-144
ref|XP_004158026.1| PREDICTED: telomerase Cajal body protein 1-l...   517   e-144

>ref|XP_002277046.2| PREDICTED: telomerase Cajal body protein 1-like [Vitis vinifera]
            gi|302144185|emb|CBI23312.3| unnamed protein product
            [Vitis vinifera]
          Length = 407

 Score =  526 bits (1355), Expect = e-147
 Identities = 243/319 (76%), Positives = 282/319 (88%), Gaps = 2/319 (0%)
 Frame = -2

Query: 1101 TLRKFNLPDN-EDTCPPSAPGDSYVADLVVSEGESVYDYCWYPYMSASDPATCVFASTTR 925
            TLR F+LP+N  D    +   DSY A +VVSEGES++D+CWYPYMSASDP TCVFASTTR
Sbjct: 86   TLRLFSLPENGSDHHESACDEDSYAASIVVSEGESIHDHCWYPYMSASDPVTCVFASTTR 145

Query: 924  DHPLHLWDAVSGQLRGTYRAYDAMDEISAAFSAAFNPSGTKLFAGYNKSVRIFDIHRPGR 745
            DHP+HLWDA SG+LR TYRAYDA+DEI+ AFS AFNP+GTK+FAGYNK +R+FD+HRPGR
Sbjct: 146  DHPIHLWDAASGELRCTYRAYDAVDEITTAFSIAFNPAGTKIFAGYNKCLRVFDVHRPGR 205

Query: 744  DFEQYSTLQGNKEGQSGIISTIAFCPSNTGMLAAGSYGQTTAIYSEGNMELLYVLHGQEG 565
            DFEQYST++GNKEGQSGII+ IAFCP++TGMLA GSY +TTAIY E NMELLY+LHGQEG
Sbjct: 206  DFEQYSTIKGNKEGQSGIIAAIAFCPTHTGMLATGSYSRTTAIYREDNMELLYILHGQEG 265

Query: 564  GVTHVQFSRDGNYLYTGGRKDPYILCWDIRNTVSIVYKLYRSSESTNQRILFDIEPSGRH 385
            GVT+VQFS+DGN+LYTGGRKDPYILCWDIRNTV+ VYKLYRS+E+TNQRI FDIEP GRH
Sbjct: 266  GVTNVQFSKDGNFLYTGGRKDPYILCWDIRNTVNTVYKLYRSTETTNQRIFFDIEPGGRH 325

Query: 384  LGTGGQDGQIHIYDLQTGQWVTSFQAASDTVNGFCFHPFLPIAASSSGHRRFGMPD-DLD 208
            LGTGGQDG +HIYDLQTGQW++ FQAASDT+NGF FHPFLP+AASSSGHRRFG+P+ + D
Sbjct: 326  LGTGGQDGLVHIYDLQTGQWISCFQAASDTINGFSFHPFLPMAASSSGHRRFGIPESNED 385

Query: 207  EGFSLSDEENCASVWSFFY 151
                +S +ENCASVWSF Y
Sbjct: 386  LSLGISGDENCASVWSFSY 404


>ref|XP_002525611.1| WD-repeat protein, putative [Ricinus communis]
            gi|223535047|gb|EEF36729.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 422

 Score =  520 bits (1339), Expect = e-145
 Identities = 242/350 (69%), Positives = 291/350 (83%), Gaps = 5/350 (1%)
 Frame = -2

Query: 1101 TLRKFNLPD---NEDT--CPPSAPGDSYVADLVVSEGESVYDYCWYPYMSASDPATCVFA 937
            TLR F+LPD   ++D+  C      DSY + +VV EGESVYD+CWYPYM+ASDP +CVFA
Sbjct: 73   TLRVFSLPDYCSSDDSIACSLDTDQDSYDSSIVVKEGESVYDFCWYPYMTASDPVSCVFA 132

Query: 936  STTRDHPLHLWDAVSGQLRGTYRAYDAMDEISAAFSAAFNPSGTKLFAGYNKSVRIFDIH 757
            STTRDHP+HLWDA SG LR TYRAYDA+DEI+AAFS +FNP+G K+FAGYNKS+R+FDIH
Sbjct: 133  STTRDHPIHLWDASSGLLRCTYRAYDAVDEITAAFSISFNPAGNKMFAGYNKSIRVFDIH 192

Query: 756  RPGRDFEQYSTLQGNKEGQSGIISTIAFCPSNTGMLAAGSYGQTTAIYSEGNMELLYVLH 577
            RPGR FEQ+STLQGNKEGQ+GIIS+IAFCP+++GMLA GSY  TTAI+ E NMELLYVLH
Sbjct: 193  RPGRVFEQHSTLQGNKEGQTGIISSIAFCPTHSGMLATGSYSHTTAIFREDNMELLYVLH 252

Query: 576  GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDIRNTVSIVYKLYRSSESTNQRILFDIEP 397
            GQEGG+TH+QFSRDGNYLYTGGRKDPYILCWD+R T  +VYKLYRS+E TNQRILFD+EP
Sbjct: 253  GQEGGITHIQFSRDGNYLYTGGRKDPYILCWDMRKTAEVVYKLYRSTEQTNQRILFDVEP 312

Query: 396  SGRHLGTGGQDGQIHIYDLQTGQWVTSFQAASDTVNGFCFHPFLPIAASSSGHRRFGMPD 217
             GR+L TGGQDG +H+YDLQ+GQW++ FQAA+DTVNGF FHP LP+AASSSGHRRF +PD
Sbjct: 313  YGRYLATGGQDGLVHVYDLQSGQWISGFQAAADTVNGFSFHPILPMAASSSGHRRFQVPD 372

Query: 216  DLDEGFSLSDEENCASVWSFFYSPIADNEGNIDCHDSNTPIESEDIRKDS 67
            D  E   L  +ENCA+VWSF Y+   +N  NI   + N+  E++ I +D+
Sbjct: 373  DGPEDLCLHGDENCATVWSFSYASAVENGANIHGGEFNSQSENDMIHQDT 422


>ref|XP_004146583.1| PREDICTED: telomerase Cajal body protein 1-like [Cucumis sativus]
          Length = 417

 Score =  518 bits (1334), Expect = e-144
 Identities = 242/317 (76%), Positives = 276/317 (87%), Gaps = 2/317 (0%)
 Frame = -2

Query: 1101 TLRKFNLPDNED--TCPPSAPGDSYVADLVVSEGESVYDYCWYPYMSASDPATCVFASTT 928
            +LR FNLPD  D  +   +A  DS+ ++LVV EGESVYD+CWYPYMSASDP TCVFASTT
Sbjct: 87   SLRIFNLPDYGDDVSVNVAAEEDSFTSNLVVGEGESVYDFCWYPYMSASDPVTCVFASTT 146

Query: 927  RDHPLHLWDAVSGQLRGTYRAYDAMDEISAAFSAAFNPSGTKLFAGYNKSVRIFDIHRPG 748
            RDHP+HLWDA SG+LR TYRAYDAMDEI+AAFS AFNP+GTK+FAGYNK VRIFD+HRPG
Sbjct: 147  RDHPIHLWDAASGELRCTYRAYDAMDEITAAFSIAFNPAGTKIFAGYNKLVRIFDLHRPG 206

Query: 747  RDFEQYSTLQGNKEGQSGIISTIAFCPSNTGMLAAGSYGQTTAIYSEGNMELLYVLHGQE 568
            RDF Q+STLQGNKEGQ+GIIS IAF P+++GMLA GSY QTT IY E NMELLYVLHGQE
Sbjct: 207  RDFGQHSTLQGNKEGQTGIISAIAFSPTHSGMLALGSYSQTTGIYREDNMELLYVLHGQE 266

Query: 567  GGVTHVQFSRDGNYLYTGGRKDPYILCWDIRNTVSIVYKLYRSSESTNQRILFDIEPSGR 388
            GG+TH+QFS+DGNYLYTGGRKDPYILCWDIR +V +VYKLYRSSE+TNQRI FDIEP G+
Sbjct: 267  GGITHIQFSKDGNYLYTGGRKDPYILCWDIRKSVDVVYKLYRSSENTNQRIFFDIEPCGQ 326

Query: 387  HLGTGGQDGQIHIYDLQTGQWVTSFQAASDTVNGFCFHPFLPIAASSSGHRRFGMPDDLD 208
            HLGTGGQDG +H+YDLQTGQWVTSFQAA DTVNGF FHP++P+  +SSGHRRF  PD+ D
Sbjct: 327  HLGTGGQDGFVHVYDLQTGQWVTSFQAAQDTVNGFSFHPYMPMTVTSSGHRRFIGPDNDD 386

Query: 207  EGFSLSDEENCASVWSF 157
            E   LS +ENCAS+WSF
Sbjct: 387  EDLCLSGDENCASLWSF 403


>ref|XP_002316658.1| predicted protein [Populus trichocarpa] gi|222859723|gb|EEE97270.1|
            predicted protein [Populus trichocarpa]
          Length = 374

 Score =  518 bits (1334), Expect = e-144
 Identities = 241/320 (75%), Positives = 270/320 (84%), Gaps = 5/320 (1%)
 Frame = -2

Query: 1101 TLRKFNLPDN-----EDTCPPSAPGDSYVADLVVSEGESVYDYCWYPYMSASDPATCVFA 937
            TL  F+LPDN      D C  +   DSY A L+V EGESVYDYCWYPYM+ASDP +CVFA
Sbjct: 54   TLHSFSLPDNGSGSDADGCCLAIDEDSYDASLIVKEGESVYDYCWYPYMTASDPVSCVFA 113

Query: 936  STTRDHPLHLWDAVSGQLRGTYRAYDAMDEISAAFSAAFNPSGTKLFAGYNKSVRIFDIH 757
            +TTRDHP+HLWDA SG LR TYRAYDA+DEI+AA S AFNP+GTK+FAGYNKS+R+FDIH
Sbjct: 114  TTTRDHPIHLWDATSGLLRCTYRAYDAVDEITAAISIAFNPAGTKIFAGYNKSIRVFDIH 173

Query: 756  RPGRDFEQYSTLQGNKEGQSGIISTIAFCPSNTGMLAAGSYGQTTAIYSEGNMELLYVLH 577
            RPGRDF QYST+QGNKEGQ+GIIS +AF P++TGMLA GSY QTTAIY E NMELLYVLH
Sbjct: 174  RPGRDFAQYSTIQGNKEGQTGIISAVAFSPTHTGMLATGSYSQTTAIYREDNMELLYVLH 233

Query: 576  GQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDIRNTVSIVYKLYRSSESTNQRILFDIEP 397
            GQEGG+THVQFS+DGNYLYTGGRKDPYILCWDIR  V +VYKLYRSSE TNQRI FDIEP
Sbjct: 234  GQEGGITHVQFSKDGNYLYTGGRKDPYILCWDIRKAVEVVYKLYRSSEYTNQRIFFDIEP 293

Query: 396  SGRHLGTGGQDGQIHIYDLQTGQWVTSFQAASDTVNGFCFHPFLPIAASSSGHRRFGMPD 217
             GRHL TGGQDG +HIYDLQ GQW++ FQAA+DTVNGF FHPFLP+A SSSGHRRF +PD
Sbjct: 294  LGRHLATGGQDGLVHIYDLQNGQWISGFQAATDTVNGFAFHPFLPMAVSSSGHRRFKVPD 353

Query: 216  DLDEGFSLSDEENCASVWSF 157
              DE   L+  ENCASVW+F
Sbjct: 354  GCDENLPLTGYENCASVWNF 373


>ref|XP_004158026.1| PREDICTED: telomerase Cajal body protein 1-like [Cucumis sativus]
          Length = 417

 Score =  517 bits (1331), Expect = e-144
 Identities = 241/317 (76%), Positives = 276/317 (87%), Gaps = 2/317 (0%)
 Frame = -2

Query: 1101 TLRKFNLPDNED--TCPPSAPGDSYVADLVVSEGESVYDYCWYPYMSASDPATCVFASTT 928
            +LR FNLPD  D  +   +A  DS+ ++LVV EGESVYD+CWYPYMSASDP TCVFASTT
Sbjct: 87   SLRIFNLPDYGDDVSVNVAAEEDSFTSNLVVGEGESVYDFCWYPYMSASDPVTCVFASTT 146

Query: 927  RDHPLHLWDAVSGQLRGTYRAYDAMDEISAAFSAAFNPSGTKLFAGYNKSVRIFDIHRPG 748
            RDHP+HLWDA SG+LR TYRAYDAMDEI+AAFS AFNP+GTK+F+GYNK VRIFD+HRPG
Sbjct: 147  RDHPIHLWDAASGELRCTYRAYDAMDEITAAFSIAFNPAGTKIFSGYNKLVRIFDLHRPG 206

Query: 747  RDFEQYSTLQGNKEGQSGIISTIAFCPSNTGMLAAGSYGQTTAIYSEGNMELLYVLHGQE 568
            RDF Q+STLQGNKEGQ+GIIS IAF P+++GMLA GSY QTT IY E NMELLYVLHGQE
Sbjct: 207  RDFGQHSTLQGNKEGQTGIISAIAFSPTHSGMLALGSYSQTTGIYREDNMELLYVLHGQE 266

Query: 567  GGVTHVQFSRDGNYLYTGGRKDPYILCWDIRNTVSIVYKLYRSSESTNQRILFDIEPSGR 388
            GG+TH+QFS+DGNYLYTGGRKDPYILCWDIR +V +VYKLYRSSE+TNQRI FDIEP G+
Sbjct: 267  GGITHIQFSKDGNYLYTGGRKDPYILCWDIRKSVDVVYKLYRSSENTNQRIFFDIEPCGQ 326

Query: 387  HLGTGGQDGQIHIYDLQTGQWVTSFQAASDTVNGFCFHPFLPIAASSSGHRRFGMPDDLD 208
            HLGTGGQDG +H+YDLQTGQWVTSFQAA DTVNGF FHP++P+  +SSGHRRF  PD+ D
Sbjct: 327  HLGTGGQDGFVHVYDLQTGQWVTSFQAAQDTVNGFSFHPYMPMTVTSSGHRRFIGPDNDD 386

Query: 207  EGFSLSDEENCASVWSF 157
            E   LS +ENCAS+WSF
Sbjct: 387  EDLCLSGDENCASLWSF 403


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