BLASTX nr result

ID: Coptis21_contig00028396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028396
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002455180.1| hypothetical protein SORBIDRAFT_03g005620 [S...    61   8e-08
ref|XP_002873026.1| hypothetical protein ARALYDRAFT_486966 [Arab...    59   3e-07
ref|XP_002462769.1| hypothetical protein SORBIDRAFT_02g031640 [S...    59   4e-07
dbj|BAD61347.1| hypothetical protein [Oryza sativa Japonica Group]     59   5e-07
ref|XP_002884714.1| predicted protein [Arabidopsis lyrata subsp....    59   5e-07

>ref|XP_002455180.1| hypothetical protein SORBIDRAFT_03g005620 [Sorghum bicolor]
           gi|241927155|gb|EES00300.1| hypothetical protein
           SORBIDRAFT_03g005620 [Sorghum bicolor]
          Length = 285

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/73 (42%), Positives = 46/73 (63%)
 Frame = -2

Query: 254 DKGSLVNEPATFMIMDDLEVMPMSTSVCVELLEKIGATAFNMLEEMTVKVAFGEVLSLLR 75
           +K  LV    T+ +MDDL+V PMST   + L+   G T  +ML+E TV++ + E L +LR
Sbjct: 194 NKNGLVRSVVTYTVMDDLKVAPMSTISGITLINTFGITDISMLKEKTVQIGYEEGLEILR 253

Query: 74  LLFVSETPLTDLF 36
           L   S+T LT++F
Sbjct: 254 LSLQSKTVLTNVF 266


>ref|XP_002873026.1| hypothetical protein ARALYDRAFT_486966 [Arabidopsis lyrata subsp.
           lyrata] gi|297318863|gb|EFH49285.1| hypothetical protein
           ARALYDRAFT_486966 [Arabidopsis lyrata subsp. lyrata]
          Length = 422

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
 Frame = -2

Query: 326 LCRKSKILNSQM-YLNKEYYNIIYLDKGSLVNEPATFMIMDDLEVMPMSTSVCVELLEKI 150
           LC+  K++N ++ +L  E  ++    +G  + + ++F+I DDL V   ST   ++ L+ +
Sbjct: 91  LCKCGKMMNEEISFLEYEENDV----EGVFMRDKSSFIITDDLRVTDDSTGSLLQTLKDL 146

Query: 149 GATAFNMLEEMTVKVAFGEVLSLLRLLFVSETPLTDLF 36
           G    + L E  + + F EV++LL+ +F S TPLTD F
Sbjct: 147 GCADVSKLREQVLDIGFKEVMTLLQCVFTSNTPLTDTF 184


>ref|XP_002462769.1| hypothetical protein SORBIDRAFT_02g031640 [Sorghum bicolor]
           gi|241926146|gb|EER99290.1| hypothetical protein
           SORBIDRAFT_02g031640 [Sorghum bicolor]
          Length = 271

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/74 (43%), Positives = 43/74 (58%)
 Frame = -2

Query: 257 LDKGSLVNEPATFMIMDDLEVMPMSTSVCVELLEKIGATAFNMLEEMTVKVAFGEVLSLL 78
           L  G  V E  T+++MDDL V PMST   + LL+K      + LEEMTV++   E + LL
Sbjct: 187 LGAGGYVKELVTYLVMDDLTVAPMSTISAIMLLKKFDVKDCSALEEMTVELGTREAVMLL 246

Query: 77  RLLFVSETPLTDLF 36
           +    S T LTD+F
Sbjct: 247 KASLQSSTALTDVF 260


>dbj|BAD61347.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 308

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/68 (42%), Positives = 42/68 (61%)
 Frame = -2

Query: 239 VNEPATFMIMDDLEVMPMSTSVCVELLEKIGATAFNMLEEMTVKVAFGEVLSLLRLLFVS 60
           V +  T+ +MDDL  MPMS+   + LL K+G    + LEE TVK+ + E L +L+    S
Sbjct: 190 VRDVVTYTVMDDLTFMPMSSISSIALLSKLGVEDLSALEEKTVKIGYQEGLEILKASLQS 249

Query: 59  ETPLTDLF 36
           +T LTD+F
Sbjct: 250 KTVLTDVF 257


>ref|XP_002884714.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330554|gb|EFH60973.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 492

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/71 (42%), Positives = 45/71 (63%)
 Frame = -2

Query: 248 GSLVNEPATFMIMDDLEVMPMSTSVCVELLEKIGATAFNMLEEMTVKVAFGEVLSLLRLL 69
           G L++   +F+I DDL+V   S  + + +L  +G + F+ L+EM + V F E+L+LL  L
Sbjct: 158 GVLLSCRTSFVITDDLKVALNSMGLVMNVLNDLGYSGFDKLQEMLIDVGFEEILTLLGCL 217

Query: 68  FVSETPLTDLF 36
           F SE PLTD F
Sbjct: 218 FTSEAPLTDTF 228


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