BLASTX nr result
ID: Coptis21_contig00028396
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00028396 (333 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002455180.1| hypothetical protein SORBIDRAFT_03g005620 [S... 61 8e-08 ref|XP_002873026.1| hypothetical protein ARALYDRAFT_486966 [Arab... 59 3e-07 ref|XP_002462769.1| hypothetical protein SORBIDRAFT_02g031640 [S... 59 4e-07 dbj|BAD61347.1| hypothetical protein [Oryza sativa Japonica Group] 59 5e-07 ref|XP_002884714.1| predicted protein [Arabidopsis lyrata subsp.... 59 5e-07 >ref|XP_002455180.1| hypothetical protein SORBIDRAFT_03g005620 [Sorghum bicolor] gi|241927155|gb|EES00300.1| hypothetical protein SORBIDRAFT_03g005620 [Sorghum bicolor] Length = 285 Score = 61.2 bits (147), Expect = 8e-08 Identities = 31/73 (42%), Positives = 46/73 (63%) Frame = -2 Query: 254 DKGSLVNEPATFMIMDDLEVMPMSTSVCVELLEKIGATAFNMLEEMTVKVAFGEVLSLLR 75 +K LV T+ +MDDL+V PMST + L+ G T +ML+E TV++ + E L +LR Sbjct: 194 NKNGLVRSVVTYTVMDDLKVAPMSTISGITLINTFGITDISMLKEKTVQIGYEEGLEILR 253 Query: 74 LLFVSETPLTDLF 36 L S+T LT++F Sbjct: 254 LSLQSKTVLTNVF 266 >ref|XP_002873026.1| hypothetical protein ARALYDRAFT_486966 [Arabidopsis lyrata subsp. lyrata] gi|297318863|gb|EFH49285.1| hypothetical protein ARALYDRAFT_486966 [Arabidopsis lyrata subsp. lyrata] Length = 422 Score = 59.3 bits (142), Expect = 3e-07 Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 1/98 (1%) Frame = -2 Query: 326 LCRKSKILNSQM-YLNKEYYNIIYLDKGSLVNEPATFMIMDDLEVMPMSTSVCVELLEKI 150 LC+ K++N ++ +L E ++ +G + + ++F+I DDL V ST ++ L+ + Sbjct: 91 LCKCGKMMNEEISFLEYEENDV----EGVFMRDKSSFIITDDLRVTDDSTGSLLQTLKDL 146 Query: 149 GATAFNMLEEMTVKVAFGEVLSLLRLLFVSETPLTDLF 36 G + L E + + F EV++LL+ +F S TPLTD F Sbjct: 147 GCADVSKLREQVLDIGFKEVMTLLQCVFTSNTPLTDTF 184 >ref|XP_002462769.1| hypothetical protein SORBIDRAFT_02g031640 [Sorghum bicolor] gi|241926146|gb|EER99290.1| hypothetical protein SORBIDRAFT_02g031640 [Sorghum bicolor] Length = 271 Score = 58.9 bits (141), Expect = 4e-07 Identities = 32/74 (43%), Positives = 43/74 (58%) Frame = -2 Query: 257 LDKGSLVNEPATFMIMDDLEVMPMSTSVCVELLEKIGATAFNMLEEMTVKVAFGEVLSLL 78 L G V E T+++MDDL V PMST + LL+K + LEEMTV++ E + LL Sbjct: 187 LGAGGYVKELVTYLVMDDLTVAPMSTISAIMLLKKFDVKDCSALEEMTVELGTREAVMLL 246 Query: 77 RLLFVSETPLTDLF 36 + S T LTD+F Sbjct: 247 KASLQSSTALTDVF 260 >dbj|BAD61347.1| hypothetical protein [Oryza sativa Japonica Group] Length = 308 Score = 58.5 bits (140), Expect = 5e-07 Identities = 29/68 (42%), Positives = 42/68 (61%) Frame = -2 Query: 239 VNEPATFMIMDDLEVMPMSTSVCVELLEKIGATAFNMLEEMTVKVAFGEVLSLLRLLFVS 60 V + T+ +MDDL MPMS+ + LL K+G + LEE TVK+ + E L +L+ S Sbjct: 190 VRDVVTYTVMDDLTFMPMSSISSIALLSKLGVEDLSALEEKTVKIGYQEGLEILKASLQS 249 Query: 59 ETPLTDLF 36 +T LTD+F Sbjct: 250 KTVLTDVF 257 >ref|XP_002884714.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297330554|gb|EFH60973.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 492 Score = 58.5 bits (140), Expect = 5e-07 Identities = 30/71 (42%), Positives = 45/71 (63%) Frame = -2 Query: 248 GSLVNEPATFMIMDDLEVMPMSTSVCVELLEKIGATAFNMLEEMTVKVAFGEVLSLLRLL 69 G L++ +F+I DDL+V S + + +L +G + F+ L+EM + V F E+L+LL L Sbjct: 158 GVLLSCRTSFVITDDLKVALNSMGLVMNVLNDLGYSGFDKLQEMLIDVGFEEILTLLGCL 217 Query: 68 FVSETPLTDLF 36 F SE PLTD F Sbjct: 218 FTSEAPLTDTF 228