BLASTX nr result

ID: Coptis21_contig00028386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028386
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512086.1| SPFH domain-containing protein 2 precursor, ...   188   3e-46
ref|XP_003556691.1| PREDICTED: erlin-2-like [Glycine max]             182   2e-44
ref|XP_003607805.1| Erlin-2 [Medicago truncatula] gi|355508860|g...   181   5e-44
ref|XP_003528559.1| PREDICTED: erlin-2-B-like [Glycine max]           180   9e-44
ref|XP_002875209.1| band 7 family protein [Arabidopsis lyrata su...   180   9e-44

>ref|XP_002512086.1| SPFH domain-containing protein 2 precursor, putative [Ricinus
           communis] gi|223549266|gb|EEF50755.1| SPFH
           domain-containing protein 2 precursor, putative [Ricinus
           communis]
          Length = 365

 Score =  188 bits (478), Expect = 3e-46
 Identities = 90/135 (66%), Positives = 111/135 (82%), Gaps = 7/135 (5%)
 Frame = -1

Query: 386 RAAAA-------PPPGDISSIFIVLIAFLAVAAMVLVPATLSAQGSSFSILHQVPEGHVG 228
           RAAAA       PP GD S I  V +AF+ + +++++P++ + + +S SILHQVPEGHVG
Sbjct: 9   RAAAAAAAGAPRPPSGDFSPILTVFLAFIGIISIIVIPSSANIK-NSLSILHQVPEGHVG 67

Query: 227 VYWRGGALLNTITEPGFHTKLPFITQFEPIQVTLQTDQVKDIPCGTKGGVMISFEKIEVV 48
           VYWRGGALL+TIT PGFH K+P +T +EP+QVTLQTDQV+DIPCGTKGGVMI+FEKIEVV
Sbjct: 68  VYWRGGALLDTITSPGFHLKMPLLTHYEPVQVTLQTDQVRDIPCGTKGGVMINFEKIEVV 127

Query: 47  NRLKKNYVYETLLNY 3
           NRL+K YVYETLLNY
Sbjct: 128 NRLRKEYVYETLLNY 142


>ref|XP_003556691.1| PREDICTED: erlin-2-like [Glycine max]
          Length = 361

 Score =  182 bits (462), Expect = 2e-44
 Identities = 90/133 (67%), Positives = 107/133 (80%), Gaps = 5/133 (3%)
 Frame = -1

Query: 386 RAAAAP--PPG---DISSIFIVLIAFLAVAAMVLVPATLSAQGSSFSILHQVPEGHVGVY 222
           R AA+P  PP    D ++I   L++F A+ A+VL+P+      +S SILHQVPEGHVGVY
Sbjct: 6   RTAASPRSPPRQGHDSTAILFTLLSFFAIVALVLLPSASPFFQNSLSILHQVPEGHVGVY 65

Query: 221 WRGGALLNTITEPGFHTKLPFITQFEPIQVTLQTDQVKDIPCGTKGGVMISFEKIEVVNR 42
           WRGGALL TITEPGFH K+PF+TQ+EP+QVTLQTD V DIPCGTKGGVMISF KIEVVNR
Sbjct: 66  WRGGALLKTITEPGFHLKMPFLTQYEPVQVTLQTDMVTDIPCGTKGGVMISFGKIEVVNR 125

Query: 41  LKKNYVYETLLNY 3
           L+K +V+ETLLNY
Sbjct: 126 LRKEFVFETLLNY 138


>ref|XP_003607805.1| Erlin-2 [Medicago truncatula] gi|355508860|gb|AES90002.1| Erlin-2
           [Medicago truncatula]
          Length = 361

 Score =  181 bits (459), Expect = 5e-44
 Identities = 88/126 (69%), Positives = 103/126 (81%)
 Frame = -1

Query: 380 AAAPPPGDISSIFIVLIAFLAVAAMVLVPATLSAQGSSFSILHQVPEGHVGVYWRGGALL 201
           AAA PP   SSI +  ++F+A+A  VLVP+   +  ++ +I+HQVPEGHVGVYWRGGALL
Sbjct: 14  AAADPPS--SSILVPFLSFIAIAVFVLVPSASPSFKNTMAIVHQVPEGHVGVYWRGGALL 71

Query: 200 NTITEPGFHTKLPFITQFEPIQVTLQTDQVKDIPCGTKGGVMISFEKIEVVNRLKKNYVY 21
            TITEPGFH K+PF+TQFEP+QVTLQTD+V DIPCGTKGGVMI F KIEVVNRL K  VY
Sbjct: 72  KTITEPGFHMKMPFLTQFEPVQVTLQTDEVTDIPCGTKGGVMIVFGKIEVVNRLHKESVY 131

Query: 20  ETLLNY 3
           ETLLNY
Sbjct: 132 ETLLNY 137


>ref|XP_003528559.1| PREDICTED: erlin-2-B-like [Glycine max]
          Length = 364

 Score =  180 bits (457), Expect = 9e-44
 Identities = 87/127 (68%), Positives = 102/127 (80%), Gaps = 4/127 (3%)
 Frame = -1

Query: 371 PPPG----DISSIFIVLIAFLAVAAMVLVPATLSAQGSSFSILHQVPEGHVGVYWRGGAL 204
           PPP     D +SI    ++F A+ A+VL+P+   +  +S SILHQVPEGHVGVYWRGGAL
Sbjct: 15  PPPARQSHDSTSILFTFLSFFAIVALVLLPSASPSFQNSLSILHQVPEGHVGVYWRGGAL 74

Query: 203 LNTITEPGFHTKLPFITQFEPIQVTLQTDQVKDIPCGTKGGVMISFEKIEVVNRLKKNYV 24
           L TITEPGFH K+PFITQ+EP+QVTLQTD V DIPCGTKGGVMISF KIEVVN+L K +V
Sbjct: 75  LKTITEPGFHLKMPFITQYEPVQVTLQTDMVIDIPCGTKGGVMISFGKIEVVNQLHKEFV 134

Query: 23  YETLLNY 3
           +ETLLNY
Sbjct: 135 FETLLNY 141


>ref|XP_002875209.1| band 7 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321047|gb|EFH51468.1| band 7 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 356

 Score =  180 bits (457), Expect = 9e-44
 Identities = 87/122 (71%), Positives = 100/122 (81%)
 Frame = -1

Query: 368 PPGDISSIFIVLIAFLAVAAMVLVPATLSAQGSSFSILHQVPEGHVGVYWRGGALLNTIT 189
           P GD+SSIFI    F A+AA+V+ P+         S++HQVPEGHVG YWRGGALLN IT
Sbjct: 19  PGGDVSSIFIAFGVFAAIAALVMFPS---------SLVHQVPEGHVGAYWRGGALLNIIT 69

Query: 188 EPGFHTKLPFITQFEPIQVTLQTDQVKDIPCGTKGGVMISFEKIEVVNRLKKNYVYETLL 9
           EPGFH KLPFIT +EP+QVTLQTDQV  IPCGTKGGVMI+FEKIEVVNRL+K+YVY+TLL
Sbjct: 70  EPGFHLKLPFITNYEPVQVTLQTDQVSLIPCGTKGGVMITFEKIEVVNRLRKDYVYDTLL 129

Query: 8   NY 3
           NY
Sbjct: 130 NY 131


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