BLASTX nr result
ID: Coptis21_contig00028384
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00028384 (495 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN75374.1| hypothetical protein VITISV_029152 [Vitis vinifera] 63 2e-08 emb|CAN79789.1| hypothetical protein VITISV_039779 [Vitis vinifera] 63 3e-08 emb|CAN78062.1| hypothetical protein VITISV_036399 [Vitis vinifera] 63 3e-08 ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica... 62 4e-08 gb|ABD28730.1| Ribonuclease H [Medicago truncatula] 60 2e-07 >emb|CAN75374.1| hypothetical protein VITISV_029152 [Vitis vinifera] Length = 655 Score = 63.2 bits (152), Expect = 2e-08 Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 3/127 (2%) Frame = +2 Query: 2 VNLKLSAIAWKLLHKCSATDTYLKGKGIKGISKCYLGCDREEDLQHVIWECSFSRQLWDW 181 V K+ AW+ T +LK +G +KC+L CD EE + H++ C ++ LW+ Sbjct: 498 VPTKVGFFAWEASWGKVLTQDHLKRRGWSLANKCFLCCDDEETINHILIHCPKAKVLWNL 557 Query: 182 LAEMFNFSKVFSNFKETLLMSKNQSPIIK---HLWNAAVVAGMVTMWVHRNGIVFEEKKK 352 + MF + V + +L+ + S + K +W AA + TMW RN I F+ + Sbjct: 558 MFTMFRVNWVLQLTVKDILLGWSDSFVDKKRGKIWRAAPLCLFWTMWKARNRIAFDNEAL 617 Query: 353 NMSGCKT 373 ++ KT Sbjct: 618 SIQRLKT 624 >emb|CAN79789.1| hypothetical protein VITISV_039779 [Vitis vinifera] Length = 1566 Score = 62.8 bits (151), Expect = 3e-08 Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 3/127 (2%) Frame = +2 Query: 2 VNLKLSAIAWKLLHKCSATDTYLKGKGIKGISKCYLGCDREEDLQHVIWECSFSRQLWDW 181 V K+ AW+ T +LK +G ++C+L CD EE + H++ C ++ LW+ Sbjct: 1409 VPTKVGFFAWEASWGKVLTQDHLKRRGWSLANRCFLCCDDEETINHILIHCPKAKVLWNL 1468 Query: 182 LAEMFNFSKVFSNFKETLLMSKNQSPIIK---HLWNAAVVAGMVTMWVHRNGIVFEEKKK 352 + MF + V + +L+ + S + K +W AA + TMW RN I F+ + Sbjct: 1469 MFTMFRVNWVLQXTVKDILLGWSDSFVDKKRGKIWRAAPLCLFWTMWKARNRIAFDNEAL 1528 Query: 353 NMSGCKT 373 ++ KT Sbjct: 1529 SIQRLKT 1535 >emb|CAN78062.1| hypothetical protein VITISV_036399 [Vitis vinifera] Length = 522 Score = 62.8 bits (151), Expect = 3e-08 Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 3/115 (2%) Frame = +2 Query: 11 KLSAIAWKLLHKCSATDTYLKGKGIKGISKCYLGCDREEDLQHVIWECSFSRQLWDWLAE 190 K+ AW+ T LK +G +++C+L C+ EE + H++ CS +R+LWD L Sbjct: 368 KVCFFAWEASWGKVLTMDQLKKRGXAVVNRCFLCCEEEESIDHILIHCSKARELWDLLFA 427 Query: 191 MFNFSKVF-SNFKETLLMSKNQSPIIKH--LWNAAVVAGMVTMWVHRNGIVFEEK 346 +F V S+ +ETL+ + KH +W AA + +W+ RN I F+ + Sbjct: 428 LFGVCWVLPSSARETLVEWRGFMLGKKHSKVWKAAPLCLFWAVWMERNKIAFDNE 482 >ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula] gi|355496705|gb|AES77908.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula] Length = 666 Score = 62.4 bits (150), Expect = 4e-08 Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 1/129 (0%) Frame = +2 Query: 17 SAIAWKLLHKCSATDTYLKGKGIKGISKCYLGCDREEDLQHVIWECSFSRQLWDWLAEMF 196 S I W+LLH TD L+ +G +S C E QH+ +EC + +LWDWL + Sbjct: 50 SFITWRLLHNKLPTDENLRKRGCLIVSICCFCMKSAESSQHIFFECHVTSRLWDWLGKGT 109 Query: 197 NFSKVFSNFKETLLMS-KNQSPIIKHLWNAAVVAGMVTMWVHRNGIVFEEKKKNMSGCKT 373 + S+ + L+ + + S ++ ++ N+A++ + ++W+ RN F K + M+ Sbjct: 110 DKLLDCSSCLQLLIRNWGSGSKLVNNILNSAIIHTIWSIWIERNQRCFHNKHQAMTTLFN 169 Query: 374 DIRKQIQYS 400 I +++ S Sbjct: 170 IILAEVKMS 178 >gb|ABD28730.1| Ribonuclease H [Medicago truncatula] Length = 409 Score = 60.1 bits (144), Expect = 2e-07 Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 1/114 (0%) Frame = +2 Query: 23 IAWKLLHKCSATDTYLKGKGIKGISKCYLGCDRE-EDLQHVIWECSFSRQLWDWLAEMFN 199 I W+ LH TD L+ +G +S C C ++ E H+ +C + QLWDWL + + Sbjct: 87 ITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPVTLQLWDWLLKATD 146 Query: 200 FSKVFSNFKETLLMSKNQSPIIKHLWNAAVVAGMVTMWVHRNGIVFEEKKKNMS 361 FS+ N S +++H+ N+A+V M ++W+ N F+ +K MS Sbjct: 147 QHLDFSSIL-------NISRMVQHVMNSAIVHIMWSIWLECNNKYFDGVQKPMS 193