BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028384
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75374.1| hypothetical protein VITISV_029152 [Vitis vinifera]    63   2e-08
emb|CAN79789.1| hypothetical protein VITISV_039779 [Vitis vinifera]    63   3e-08
emb|CAN78062.1| hypothetical protein VITISV_036399 [Vitis vinifera]    63   3e-08
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    62   4e-08
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    60   2e-07

>emb|CAN75374.1| hypothetical protein VITISV_029152 [Vitis vinifera]
          Length = 655

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
 Frame = +2

Query: 2   VNLKLSAIAWKLLHKCSATDTYLKGKGIKGISKCYLGCDREEDLQHVIWECSFSRQLWDW 181
           V  K+   AW+       T  +LK +G    +KC+L CD EE + H++  C  ++ LW+ 
Sbjct: 498 VPTKVGFFAWEASWGKVLTQDHLKRRGWSLANKCFLCCDDEETINHILIHCPKAKVLWNL 557

Query: 182 LAEMFNFSKVFSNFKETLLMSKNQSPIIK---HLWNAAVVAGMVTMWVHRNGIVFEEKKK 352
           +  MF  + V     + +L+  + S + K    +W AA +    TMW  RN I F+ +  
Sbjct: 558 MFTMFRVNWVLQLTVKDILLGWSDSFVDKKRGKIWRAAPLCLFWTMWKARNRIAFDNEAL 617

Query: 353 NMSGCKT 373
           ++   KT
Sbjct: 618 SIQRLKT 624


>emb|CAN79789.1| hypothetical protein VITISV_039779 [Vitis vinifera]
          Length = 1566

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
 Frame = +2

Query: 2    VNLKLSAIAWKLLHKCSATDTYLKGKGIKGISKCYLGCDREEDLQHVIWECSFSRQLWDW 181
            V  K+   AW+       T  +LK +G    ++C+L CD EE + H++  C  ++ LW+ 
Sbjct: 1409 VPTKVGFFAWEASWGKVLTQDHLKRRGWSLANRCFLCCDDEETINHILIHCPKAKVLWNL 1468

Query: 182  LAEMFNFSKVFSNFKETLLMSKNQSPIIK---HLWNAAVVAGMVTMWVHRNGIVFEEKKK 352
            +  MF  + V     + +L+  + S + K    +W AA +    TMW  RN I F+ +  
Sbjct: 1469 MFTMFRVNWVLQXTVKDILLGWSDSFVDKKRGKIWRAAPLCLFWTMWKARNRIAFDNEAL 1528

Query: 353  NMSGCKT 373
            ++   KT
Sbjct: 1529 SIQRLKT 1535


>emb|CAN78062.1| hypothetical protein VITISV_036399 [Vitis vinifera]
          Length = 522

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
 Frame = +2

Query: 11  KLSAIAWKLLHKCSATDTYLKGKGIKGISKCYLGCDREEDLQHVIWECSFSRQLWDWLAE 190
           K+   AW+       T   LK +G   +++C+L C+ EE + H++  CS +R+LWD L  
Sbjct: 368 KVCFFAWEASWGKVLTMDQLKKRGXAVVNRCFLCCEEEESIDHILIHCSKARELWDLLFA 427

Query: 191 MFNFSKVF-SNFKETLLMSKNQSPIIKH--LWNAAVVAGMVTMWVHRNGIVFEEK 346
           +F    V  S+ +ETL+  +      KH  +W AA +     +W+ RN I F+ +
Sbjct: 428 LFGVCWVLPSSARETLVEWRGFMLGKKHSKVWKAAPLCLFWAVWMERNKIAFDNE 482


>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
 Frame = +2

Query: 17  SAIAWKLLHKCSATDTYLKGKGIKGISKCYLGCDREEDLQHVIWECSFSRQLWDWLAEMF 196
           S I W+LLH    TD  L+ +G   +S C       E  QH+ +EC  + +LWDWL +  
Sbjct: 50  SFITWRLLHNKLPTDENLRKRGCLIVSICCFCMKSAESSQHIFFECHVTSRLWDWLGKGT 109

Query: 197 NFSKVFSNFKETLLMS-KNQSPIIKHLWNAAVVAGMVTMWVHRNGIVFEEKKKNMSGCKT 373
           +     S+  + L+ +  + S ++ ++ N+A++  + ++W+ RN   F  K + M+    
Sbjct: 110 DKLLDCSSCLQLLIRNWGSGSKLVNNILNSAIIHTIWSIWIERNQRCFHNKHQAMTTLFN 169

Query: 374 DIRKQIQYS 400
            I  +++ S
Sbjct: 170 IILAEVKMS 178


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
 Frame = +2

Query: 23  IAWKLLHKCSATDTYLKGKGIKGISKCYLGCDRE-EDLQHVIWECSFSRQLWDWLAEMFN 199
           I W+ LH    TD  L+ +G   +S C   C ++ E   H+  +C  + QLWDWL +  +
Sbjct: 87  ITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPVTLQLWDWLLKATD 146

Query: 200 FSKVFSNFKETLLMSKNQSPIIKHLWNAAVVAGMVTMWVHRNGIVFEEKKKNMS 361
               FS+         N S +++H+ N+A+V  M ++W+  N   F+  +K MS
Sbjct: 147 QHLDFSSIL-------NISRMVQHVMNSAIVHIMWSIWLECNNKYFDGVQKPMS 193