BLASTX nr result

ID: Coptis21_contig00028356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028356
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320319.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_003632400.1| PREDICTED: uncharacterized protein LOC100854...    89   3e-16
emb|CBI36917.3| unnamed protein product [Vitis vinifera]               89   3e-16
ref|XP_002302744.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|XP_002515325.1| ATP binding protein, putative [Ricinus commu...    84   2e-14

>ref|XP_002320319.1| predicted protein [Populus trichocarpa] gi|222861092|gb|EEE98634.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/79 (53%), Positives = 56/79 (70%)
 Frame = -2

Query: 349 IACLTEHGFLPDESDPVSAYALTEAVYRALIFSDGDHPPKTKFMESIVLTVSWLMCAMSM 170
           I CLTE+GFL +ESDPV+AYAL EAVYRAL+ SD  H PK    +  +  +SWLMC M  
Sbjct: 302 IVCLTEYGFLAEESDPVTAYALAEAVYRALLISDRGHSPKKNLQDWALFVLSWLMCFMGA 361

Query: 169 FFTYLAYIFARLGETSKLK 113
            F++LA + ++LG+  +LK
Sbjct: 362 LFSFLADLCSKLGQRDRLK 380


>ref|XP_003632400.1| PREDICTED: uncharacterized protein LOC100854991 [Vitis vinifera]
          Length = 379

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/77 (53%), Positives = 57/77 (74%)
 Frame = -2

Query: 349 IACLTEHGFLPDESDPVSAYALTEAVYRALIFSDGDHPPKTKFMESIVLTVSWLMCAMSM 170
           I CLTE+GFL DESDPV++YAL+EAVYRAL+ SD  H PK   ++  +L ++ LMC ++ 
Sbjct: 301 IVCLTEYGFLADESDPVTSYALSEAVYRALLISDRGHIPKRSILDWTLLALALLMCYLAA 360

Query: 169 FFTYLAYIFARLGETSK 119
           FF +LA  F++LG+  K
Sbjct: 361 FFEFLAEFFSKLGQKKK 377


>emb|CBI36917.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/77 (53%), Positives = 57/77 (74%)
 Frame = -2

Query: 349 IACLTEHGFLPDESDPVSAYALTEAVYRALIFSDGDHPPKTKFMESIVLTVSWLMCAMSM 170
           I CLTE+GFL DESDPV++YAL+EAVYRAL+ SD  H PK   ++  +L ++ LMC ++ 
Sbjct: 209 IVCLTEYGFLADESDPVTSYALSEAVYRALLISDRGHIPKRSILDWTLLALALLMCYLAA 268

Query: 169 FFTYLAYIFARLGETSK 119
           FF +LA  F++LG+  K
Sbjct: 269 FFEFLAEFFSKLGQKKK 285


>ref|XP_002302744.1| predicted protein [Populus trichocarpa] gi|222844470|gb|EEE82017.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/79 (53%), Positives = 53/79 (67%)
 Frame = -2

Query: 349 IACLTEHGFLPDESDPVSAYALTEAVYRALIFSDGDHPPKTKFMESIVLTVSWLMCAMSM 170
           I CLTE+GFL +ESDPV+AYA+TEAVYRAL+ +D  H PK    +  V   SWLMC    
Sbjct: 302 IVCLTEYGFLAEESDPVTAYAVTEAVYRALLIADRGHFPKKNLQDWAVFLFSWLMCLTGA 361

Query: 169 FFTYLAYIFARLGETSKLK 113
            F +LA + ++LG   KLK
Sbjct: 362 LFAFLADLCSKLGRRDKLK 380


>ref|XP_002515325.1| ATP binding protein, putative [Ricinus communis]
           gi|223545805|gb|EEF47309.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 382

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/80 (51%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
 Frame = -2

Query: 349 IACLTEHGFLPDESDPVSAYALTEAVYRALIFSDGDHPPKTKFMESIVLTVSWLMCAMSM 170
           + CLTE+GFL +ESDPV+AYA+ EAVYRAL+ SD  H P  KF +  +  +SWLM  + +
Sbjct: 302 VVCLTEYGFLAEESDPVTAYAVAEAVYRALLISDRGHFPSKKFQDWAIFILSWLMSFLGI 361

Query: 169 FFTYLAYIFARLGE-TSKLK 113
            F +LA I   LG+  +KLK
Sbjct: 362 VFAFLAEICTALGQRRNKLK 381


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