BLASTX nr result

ID: Coptis21_contig00028348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028348
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26731.3| unnamed protein product [Vitis vinifera]              170   1e-40
ref|XP_002276411.1| PREDICTED: uncharacterized protein LOC100246...   170   1e-40
emb|CAN75217.1| hypothetical protein VITISV_003518 [Vitis vinifera]   170   1e-40
ref|XP_003600250.1| Nucleotide-binding oligomerization domain-co...   165   3e-39
ref|XP_002300355.1| predicted protein [Populus trichocarpa] gi|2...   165   4e-39

>emb|CBI26731.3| unnamed protein product [Vitis vinifera]
          Length = 1147

 Score =  170 bits (430), Expect = 1e-40
 Identities = 83/110 (75%), Positives = 92/110 (83%)
 Frame = +3

Query: 3   NREQKNPAEIEEDLLYWLRFIVSNSKRAGPQAMLPSVTVVLTHFDKITQSSDSFQITIRL 182
           NRE K PAEIEEDL YWLRFIVSNS+RA  Q MLP+VTVVLTH+DKI Q S  FQ T+  
Sbjct: 549 NRESKTPAEIEEDLQYWLRFIVSNSRRAAQQCMLPNVTVVLTHYDKINQPSQDFQATVNS 608

Query: 183 IQSLRERFQGFVEFYSTVFTVDARSSGSVSKLTHHVRKASKTILQRVPHV 332
           IQ LR++FQGFV+FY TVFTVDARSS SVSKLTHH+RK SKT+LQRVP V
Sbjct: 609 IQRLRDKFQGFVDFYPTVFTVDARSSASVSKLTHHLRKTSKTVLQRVPRV 658


>ref|XP_002276411.1| PREDICTED: uncharacterized protein LOC100246876 [Vitis vinifera]
          Length = 1386

 Score =  170 bits (430), Expect = 1e-40
 Identities = 83/110 (75%), Positives = 92/110 (83%)
 Frame = +3

Query: 3   NREQKNPAEIEEDLLYWLRFIVSNSKRAGPQAMLPSVTVVLTHFDKITQSSDSFQITIRL 182
           NRE K PAEIEEDL YWLRFIVSNS+RA  Q MLP+VTVVLTH+DKI Q S  FQ T+  
Sbjct: 593 NRESKTPAEIEEDLQYWLRFIVSNSRRAAQQCMLPNVTVVLTHYDKINQPSQDFQATVNS 652

Query: 183 IQSLRERFQGFVEFYSTVFTVDARSSGSVSKLTHHVRKASKTILQRVPHV 332
           IQ LR++FQGFV+FY TVFTVDARSS SVSKLTHH+RK SKT+LQRVP V
Sbjct: 653 IQRLRDKFQGFVDFYPTVFTVDARSSASVSKLTHHLRKTSKTVLQRVPRV 702


>emb|CAN75217.1| hypothetical protein VITISV_003518 [Vitis vinifera]
          Length = 1400

 Score =  170 bits (430), Expect = 1e-40
 Identities = 83/110 (75%), Positives = 92/110 (83%)
 Frame = +3

Query: 3   NREQKNPAEIEEDLLYWLRFIVSNSKRAGPQAMLPSVTVVLTHFDKITQSSDSFQITIRL 182
           NRE K PAEIEEDL YWLRFIVSNS+RA  Q MLP+VTVVLTH+DKI Q S  FQ T+  
Sbjct: 604 NRESKTPAEIEEDLQYWLRFIVSNSRRAAQQCMLPNVTVVLTHYDKINQPSQDFQATVNS 663

Query: 183 IQSLRERFQGFVEFYSTVFTVDARSSGSVSKLTHHVRKASKTILQRVPHV 332
           IQ LR++FQGFV+FY TVFTVDARSS SVSKLTHH+RK SKT+LQRVP V
Sbjct: 664 IQRLRDKFQGFVDFYPTVFTVDARSSASVSKLTHHLRKTSKTVLQRVPRV 713


>ref|XP_003600250.1| Nucleotide-binding oligomerization domain-containing protein
           [Medicago truncatula] gi|355489298|gb|AES70501.1|
           Nucleotide-binding oligomerization domain-containing
           protein [Medicago truncatula]
          Length = 1380

 Score =  165 bits (418), Expect = 3e-39
 Identities = 81/110 (73%), Positives = 91/110 (82%)
 Frame = +3

Query: 3   NREQKNPAEIEEDLLYWLRFIVSNSKRAGPQAMLPSVTVVLTHFDKITQSSDSFQITIRL 182
           NRE K+ AEIEEDL YWLRFIVSNSKRAG Q MLPSV +VLTHFDKI QSS + Q T+  
Sbjct: 596 NREPKSTAEIEEDLQYWLRFIVSNSKRAGQQCMLPSVAIVLTHFDKINQSSQNLQQTVDS 655

Query: 183 IQSLRERFQGFVEFYSTVFTVDARSSGSVSKLTHHVRKASKTILQRVPHV 332
           IQ LR++FQG+V+FY TVFTVDARSS SV KLTHH+RK  KT+LQRVP V
Sbjct: 656 IQRLRDKFQGYVDFYQTVFTVDARSSASVGKLTHHIRKTCKTVLQRVPRV 705


>ref|XP_002300355.1| predicted protein [Populus trichocarpa] gi|222847613|gb|EEE85160.1|
           predicted protein [Populus trichocarpa]
          Length = 1404

 Score =  165 bits (417), Expect = 4e-39
 Identities = 80/110 (72%), Positives = 92/110 (83%)
 Frame = +3

Query: 3   NREQKNPAEIEEDLLYWLRFIVSNSKRAGPQAMLPSVTVVLTHFDKITQSSDSFQITIRL 182
           NRE K PAEIEEDL YWLRFIVSNS+RA  Q MLP+VT+VLTHFDKI Q S + Q+ +  
Sbjct: 595 NREPKTPAEIEEDLQYWLRFIVSNSRRALQQCMLPNVTIVLTHFDKINQPSQNLQLAVNS 654

Query: 183 IQSLRERFQGFVEFYSTVFTVDARSSGSVSKLTHHVRKASKTILQRVPHV 332
           IQ +R++FQGF++FY TVFTVDARSS SVSKLTHH+RK SKTILQRVP V
Sbjct: 655 IQRVRDKFQGFIDFYPTVFTVDARSSASVSKLTHHLRKTSKTILQRVPRV 704


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