BLASTX nr result

ID: Coptis21_contig00028345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028345
         (848 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275729.1| PREDICTED: ribulose-1,5 bisphosphate carboxy...   228   1e-57
emb|CBI25318.3| unnamed protein product [Vitis vinifera]              224   2e-56
ref|XP_003592777.1| Ribulose-1,5 bisphosphate carboxylase/oxygen...   215   1e-53
ref|XP_003535783.1| PREDICTED: histone-lysine N-methyltransferas...   201   2e-49
ref|XP_004167280.1| PREDICTED: LOW QUALITY PROTEIN: sulfate tran...   200   3e-49

>ref|XP_002275729.1| PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large
           subunit N-methyltransferase, chloroplastic-like [Vitis
           vinifera]
          Length = 480

 Score =  228 bits (582), Expect = 1e-57
 Identities = 111/182 (60%), Positives = 144/182 (79%), Gaps = 1/182 (0%)
 Frame = -2

Query: 544 DVDSFLPWLQSKSGYEISSLLSIKNSIYGNSLFASKYIHAGDCILKVPFTVHLTSNNLLP 365
           D D FLPWL+ K+G EISS+LSI  S YG SLFASK I  GDCILKVP+ V ++ +N+  
Sbjct: 41  DCDDFLPWLEQKAGVEISSVLSIGKSTYGRSLFASKSIQTGDCILKVPYNVQISPDNVPS 100

Query: 364 EINSLLPDHVGHVARLAIVVLIEQIKGQESEWAPYISCLPKPGELHSTIFWSEEELEMVR 185
           +INSLL D VG++A+LAIV+ +E   GQ+SEWAPYI+ LP+PGE+HSTIFWSE EL+M++
Sbjct: 101 KINSLLGDEVGNIAKLAIVISVEWKMGQDSEWAPYINRLPQPGEMHSTIFWSEGELKMIQ 160

Query: 184 PSALYEETIELKAQLEKEYLALRPALDQF-PNLFKDIKYEDFMHAFALVASRAWGSCKEV 8
            S++Y+ETI  KAQ++K++LA++P L  F  NLFKDI  ++FMHA ALV SRAWGS K +
Sbjct: 161 QSSVYQETINQKAQIQKDFLAIKPVLHHFSENLFKDISLKEFMHACALVGSRAWGSTKGL 220

Query: 7   SL 2
           SL
Sbjct: 221 SL 222


>emb|CBI25318.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score =  224 bits (571), Expect = 2e-56
 Identities = 111/183 (60%), Positives = 145/183 (79%), Gaps = 2/183 (1%)
 Frame = -2

Query: 544 DVDSFLPWLQSKSGYEISSLLSIKNSIYGN-SLFASKYIHAGDCILKVPFTVHLTSNNLL 368
           D D FLPWL+ K+G EISS+LSI  S YG+ SLFASK I  GDCILKVP+ V ++ +N+ 
Sbjct: 41  DCDDFLPWLEQKAGVEISSVLSIGKSTYGSRSLFASKSIQTGDCILKVPYNVQISPDNVP 100

Query: 367 PEINSLLPDHVGHVARLAIVVLIEQIKGQESEWAPYISCLPKPGELHSTIFWSEEELEMV 188
            +INSLL D VG++A+LAIV+ +E   GQ+SEWAPYI+ LP+PGE+HSTIFWSE EL+M+
Sbjct: 101 SKINSLLGDEVGNIAKLAIVISVEWKMGQDSEWAPYINRLPQPGEMHSTIFWSEGELKMI 160

Query: 187 RPSALYEETIELKAQLEKEYLALRPALDQF-PNLFKDIKYEDFMHAFALVASRAWGSCKE 11
           + S++Y+ETI  KAQ++K++LA++P L  F  NLFKDI  ++FMHA ALV SRAWGS K 
Sbjct: 161 QQSSVYQETINQKAQIQKDFLAIKPVLHHFSENLFKDISLKEFMHACALVGSRAWGSTKG 220

Query: 10  VSL 2
           +SL
Sbjct: 221 LSL 223


>ref|XP_003592777.1| Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit
           N-methyltransferase [Medicago truncatula]
           gi|355481825|gb|AES63028.1| Ribulose-1,5 bisphosphate
           carboxylase/oxygenase large subunit N-methyltransferase
           [Medicago truncatula]
          Length = 451

 Score =  215 bits (547), Expect = 1e-53
 Identities = 103/186 (55%), Positives = 137/186 (73%)
 Frame = -2

Query: 559 FSSQSDVDSFLPWLQSKSGYEISSLLSIKNSIYGNSLFASKYIHAGDCILKVPFTVHLTS 380
           F S S + +FLPWL++K+   ISS LSI NS YGNSLFASK I  GDCIL+VP+++ LT 
Sbjct: 28  FQSHSVLHNFLPWLENKASSTISSSLSISNSSYGNSLFASKSIQTGDCILQVPYSLQLTP 87

Query: 379 NNLLPEINSLLPDHVGHVARLAIVVLIEQIKGQESEWAPYISCLPKPGELHSTIFWSEEE 200
           +NL PEI   + + VG++A+LA V+LI +  GQ+SEW PYISCLP   E+H+TIFW+E E
Sbjct: 88  DNLPPEIKPFISEDVGNIAKLATVLLIHKNLGQDSEWHPYISCLPPQAEMHNTIFWNESE 147

Query: 199 LEMVRPSALYEETIELKAQLEKEYLALRPALDQFPNLFKDIKYEDFMHAFALVASRAWGS 20
           LEM+R S++Y+ETI  K+Q+EK++L ++P    F   F D  ++DFMHA  LV SRAWGS
Sbjct: 148 LEMIRQSSVYQETIYQKSQIEKDFLEIKPVFQPFCQSFGDFTWKDFMHACTLVGSRAWGS 207

Query: 19  CKEVSL 2
            K +SL
Sbjct: 208 TKGLSL 213


>ref|XP_003535783.1| PREDICTED: histone-lysine N-methyltransferase setd3-like [Glycine
           max]
          Length = 463

 Score =  201 bits (510), Expect = 2e-49
 Identities = 100/185 (54%), Positives = 132/185 (71%), Gaps = 11/185 (5%)
 Frame = -2

Query: 523 WLQSKSGYEISSLLSIKNSIYGNSLFASKYIHAGDCILKVPFTVHLTSNNLLPEINSLLP 344
           WL+ K+   ISS L I NS YG SLFASK I  GDCILKVP+ V +T++NLLPEI SL+ 
Sbjct: 39  WLERKAACSISSSLFIGNSSYGRSLFASKIIQTGDCILKVPYRVQITADNLLPEIRSLIG 98

Query: 343 DHVGHVARLAIVVLIEQIKGQESEWAPYISCLPKPGELHSTIFWSEEELEMVRPSALYEE 164
           + VG++A+LA V+LIE+  GQ SEW PYISCLP+ GELH+T+FW+E ELEM+RPS++Y+E
Sbjct: 99  EEVGNIAKLATVILIEKKLGQGSEWYPYISCLPQQGELHNTVFWTESELEMIRPSSVYQE 158

Query: 163 TIELKAQLEKEYLALRPALDQFPNLFKDIKYEDFMHAFAL-----------VASRAWGSC 17
           TI+ K+Q+EK++LA++   +     F D  Y+DFMHA  L           V SRAWGS 
Sbjct: 159 TIDQKSQIEKDFLAIKHIFECSHQSFGDSTYKDFMHACTLVLFDHFNVELPVGSRAWGST 218

Query: 16  KEVSL 2
             ++L
Sbjct: 219 NGLAL 223


>ref|XP_004167280.1| PREDICTED: LOW QUALITY PROTEIN: sulfate transporter 4.1,
            chloroplastic-like, partial [Cucumis sativus]
          Length = 923

 Score =  200 bits (509), Expect = 3e-49
 Identities = 99/184 (53%), Positives = 137/184 (74%)
 Frame = -2

Query: 553  SQSDVDSFLPWLQSKSGYEISSLLSIKNSIYGNSLFASKYIHAGDCILKVPFTVHLTSNN 374
            ++S+ D+FLPWL+ K+  +ISS+LSI  S  G  LFAS+ I AGDCILKVPF V ++ ++
Sbjct: 701  AESNDDTFLPWLERKAETKISSVLSIGKSSIGRFLFASETIRAGDCILKVPFNVQISPDS 760

Query: 373  LLPEINSLLPDHVGHVARLAIVVLIEQIKGQESEWAPYISCLPKPGELHSTIFWSEEELE 194
            L   I  LL + +G+VA+LA+VVL+E   G  SEWAPYI  LP+P E+H+TIFW E ELE
Sbjct: 761  LPLPIRDLLGNEIGNVAKLAVVVLLEHKLGLGSEWAPYIIRLPQPWEMHNTIFWKESELE 820

Query: 193  MVRPSALYEETIELKAQLEKEYLALRPALDQFPNLFKDIKYEDFMHAFALVASRAWGSCK 14
            M+R S+LYEE++  ++Q+++E+LA+R AL+ FP +   I  +DFMHA+ALV SRAW S +
Sbjct: 821  MIRKSSLYEESLNQRSQIKREFLAIRKALEAFPEIIDRISCDDFMHAYALVTSRAWRSTE 880

Query: 13   EVSL 2
             VSL
Sbjct: 881  GVSL 884


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