BLASTX nr result

ID: Coptis21_contig00028341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028341
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325413.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28
ref|XP_002319697.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
ref|XP_002525438.1| conserved hypothetical protein [Ricinus comm...   122   4e-26
emb|CBI29933.3| unnamed protein product [Vitis vinifera]              118   6e-25
ref|XP_002276958.1| PREDICTED: uncharacterized protein LOC100262...   118   6e-25

>ref|XP_002325413.1| predicted protein [Populus trichocarpa] gi|222862288|gb|EEE99794.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score =  127 bits (319), Expect = 9e-28
 Identities = 71/111 (63%), Positives = 84/111 (75%), Gaps = 3/111 (2%)
 Frame = -2

Query: 423 GAAFEALQTAKMLAAEERPKFERDSGSVTGSNFGRSNR--RKNLQNA-RDRSPFSTSPES 253
           GAAFEALQTAK +AAE+  KFE+ SGS+TGSNFGR +   R+NL +A  D+SP S SPES
Sbjct: 280 GAAFEALQTAKKIAAEKGSKFEKSSGSITGSNFGRRDHRGRRNLSSAYGDQSPASISPES 339

Query: 252 QTVDSFIRYNSFEESPMSTGQVSCNFSYSGRSVSRKLWGGENGGVDVSLKD 100
           QT+DSF+ Y SF ESP+ST   S +  Y   SV+RKLW  ENGGVDVSLKD
Sbjct: 340 QTLDSFMEYESFIESPISTTNTSSS-EYDRGSVNRKLWSFENGGVDVSLKD 389


>ref|XP_002319697.1| predicted protein [Populus trichocarpa] gi|222858073|gb|EEE95620.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score =  124 bits (312), Expect = 6e-27
 Identities = 70/111 (63%), Positives = 83/111 (74%), Gaps = 3/111 (2%)
 Frame = -2

Query: 423 GAAFEALQTAKMLAAEERPKFERDSGSVTGSNFGRSNR--RKNLQNA-RDRSPFSTSPES 253
           GAAFEALQTAK +A E+  KFE+ SGSV+GSNFGR +   R+NL +A  D+SP S SPES
Sbjct: 280 GAAFEALQTAKKIATEKGTKFEKSSGSVSGSNFGRRDHRGRRNLSSAYGDQSPASVSPES 339

Query: 252 QTVDSFIRYNSFEESPMSTGQVSCNFSYSGRSVSRKLWGGENGGVDVSLKD 100
           QT+D F+ Y SF ESP+ST  VS N    G SV+RKLW  ENGGVD+SLKD
Sbjct: 340 QTLDFFMEYESFTESPISTTNVSSNECDRG-SVNRKLWSFENGGVDISLKD 389


>ref|XP_002525438.1| conserved hypothetical protein [Ricinus communis]
           gi|223535251|gb|EEF36928.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 603

 Score =  122 bits (305), Expect = 4e-26
 Identities = 63/110 (57%), Positives = 81/110 (73%), Gaps = 2/110 (1%)
 Frame = -2

Query: 423 GAAFEALQTAKMLAAEERPKFERDSGSVTGSNFGRSNRR--KNLQNARDRSPFSTSPESQ 250
           GAAFEALQTAK ++ ++  KF++   SVTGSNFGR + R  +NL +  + SP S SPESQ
Sbjct: 280 GAAFEALQTAKKISTDKGLKFDKSPVSVTGSNFGRRDHRGRRNLSSPGNHSPTSVSPESQ 339

Query: 249 TVDSFIRYNSFEESPMSTGQVSCNFSYSGRSVSRKLWGGENGGVDVSLKD 100
           T+DSFI Y+S  +SP+S+ Q+S N  Y  RSV+RKLW  ENG VDVSL+D
Sbjct: 340 TLDSFIEYDSLADSPVSSTQISHNMEYDRRSVNRKLWSYENGQVDVSLRD 389


>emb|CBI29933.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  118 bits (295), Expect = 6e-25
 Identities = 63/110 (57%), Positives = 78/110 (70%), Gaps = 2/110 (1%)
 Frame = -2

Query: 423 GAAFEALQTAKMLAAEERPKFERDSGSVTGSNFGRSN--RRKNLQNARDRSPFSTSPESQ 250
           GAA+EALQTA+ + +E+  KF++D G   GSN  R +  +RKNL +  D+SPFS SPESQ
Sbjct: 388 GAAYEALQTARRVVSEKGSKFDKDMGLFAGSNVVRGDHIQRKNLLSNGDQSPFSGSPESQ 447

Query: 249 TVDSFIRYNSFEESPMSTGQVSCNFSYSGRSVSRKLWGGENGGVDVSLKD 100
           T+DSF+ Y S  ESP+ST QVS N  Y   S +RKLW   NGGVDVSLKD
Sbjct: 448 TLDSFVEYESLIESPISTRQVSRNLDYDRGSANRKLWRYGNGGVDVSLKD 497


>ref|XP_002276958.1| PREDICTED: uncharacterized protein LOC100262437 [Vitis vinifera]
          Length = 615

 Score =  118 bits (295), Expect = 6e-25
 Identities = 63/110 (57%), Positives = 78/110 (70%), Gaps = 2/110 (1%)
 Frame = -2

Query: 423 GAAFEALQTAKMLAAEERPKFERDSGSVTGSNFGRSN--RRKNLQNARDRSPFSTSPESQ 250
           GAA+EALQTA+ + +E+  KF++D G   GSN  R +  +RKNL +  D+SPFS SPESQ
Sbjct: 280 GAAYEALQTARRVVSEKGSKFDKDMGLFAGSNVVRGDHIQRKNLLSNGDQSPFSGSPESQ 339

Query: 249 TVDSFIRYNSFEESPMSTGQVSCNFSYSGRSVSRKLWGGENGGVDVSLKD 100
           T+DSF+ Y S  ESP+ST QVS N  Y   S +RKLW   NGGVDVSLKD
Sbjct: 340 TLDSFVEYESLIESPISTRQVSRNLDYDRGSANRKLWRYGNGGVDVSLKD 389


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