BLASTX nr result
ID: Coptis21_contig00028335
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00028335 (632 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002316599.1| predicted protein [Populus trichocarpa] gi|2... 185 7e-45 ref|XP_002890715.1| AAA-type ATPase family protein [Arabidopsis ... 184 2e-44 ref|NP_173839.1| AAA-type ATPase-like protein [Arabidopsis thali... 183 2e-44 dbj|BAC42817.1| unknown protein [Arabidopsis thaliana] 183 2e-44 gb|ABH03541.1| putative Werner helicase-interacting protein [Ara... 183 2e-44 >ref|XP_002316599.1| predicted protein [Populus trichocarpa] gi|222859664|gb|EEE97211.1| predicted protein [Populus trichocarpa] Length = 553 Score = 185 bits (469), Expect = 7e-45 Identities = 89/116 (76%), Positives = 100/116 (86%) Frame = -1 Query: 632 PNALCQAVACYQACHFLGLPECNVNLAQCVVYLALAPKSIAVYEALQAAQKVVKESVGQN 453 P AL QAVACYQACHFLG+PECNV LAQCV YLALAPKSI+VY A+ AAQKVV+ESVGQN Sbjct: 436 PLALNQAVACYQACHFLGMPECNVILAQCVAYLALAPKSISVYRAMGAAQKVVRESVGQN 495 Query: 452 EGVPLHLRNAPTKLMKDFDYGKGYIYPPHHPSSSLSQTYLPPSLQGCKFFDWPVSN 285 EGVPLHLRNAPTKLMK+ YGK YIY P +P++ +Q++LPPSLQG KF DWP SN Sbjct: 496 EGVPLHLRNAPTKLMKELGYGKDYIYTPDNPTA--NQSFLPPSLQGYKFLDWPASN 549 >ref|XP_002890715.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata] gi|297336557|gb|EFH66974.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata] Length = 525 Score = 184 bits (466), Expect = 2e-44 Identities = 87/113 (76%), Positives = 96/113 (84%) Frame = -1 Query: 632 PNALCQAVACYQACHFLGLPECNVNLAQCVVYLALAPKSIAVYEALQAAQKVVKESVGQN 453 P+AL QAVACYQA HFLG+PECNV LAQC YLALAPKS+AVY A+ AAQKVVK+SVGQN Sbjct: 399 PSALTQAVACYQASHFLGMPECNVILAQCTAYLALAPKSVAVYRAIGAAQKVVKDSVGQN 458 Query: 452 EGVPLHLRNAPTKLMKDFDYGKGYIYPPHHPSSSLSQTYLPPSLQGCKFFDWP 294 EGVPLHLRNAPTKLMK+ YGK YIYPP PSS+ +QTYLPPSL KF +WP Sbjct: 459 EGVPLHLRNAPTKLMKELGYGKEYIYPPDDPSSAAAQTYLPPSLLHYKFLEWP 511 >ref|NP_173839.1| AAA-type ATPase-like protein [Arabidopsis thaliana] gi|2829884|gb|AAC00592.1| Hypothetical protein [Arabidopsis thaliana] gi|332192391|gb|AEE30512.1| AAA-type ATPase-like protein [Arabidopsis thaliana] Length = 525 Score = 183 bits (465), Expect = 2e-44 Identities = 88/113 (77%), Positives = 95/113 (84%) Frame = -1 Query: 632 PNALCQAVACYQACHFLGLPECNVNLAQCVVYLALAPKSIAVYEALQAAQKVVKESVGQN 453 P+AL QAVACYQA HFLG+PECNV LAQC YLALAPKSIAVY A+ AAQKVVK+SVGQN Sbjct: 399 PSALTQAVACYQASHFLGMPECNVILAQCTAYLALAPKSIAVYRAIGAAQKVVKDSVGQN 458 Query: 452 EGVPLHLRNAPTKLMKDFDYGKGYIYPPHHPSSSLSQTYLPPSLQGCKFFDWP 294 EGVPLHLRNAPTKLMK+ YGK YIYPP PSS+ QTYLPPSL KF +WP Sbjct: 459 EGVPLHLRNAPTKLMKELGYGKEYIYPPSDPSSAAGQTYLPPSLLHHKFLEWP 511 >dbj|BAC42817.1| unknown protein [Arabidopsis thaliana] Length = 525 Score = 183 bits (465), Expect = 2e-44 Identities = 88/113 (77%), Positives = 95/113 (84%) Frame = -1 Query: 632 PNALCQAVACYQACHFLGLPECNVNLAQCVVYLALAPKSIAVYEALQAAQKVVKESVGQN 453 P+AL QAVACYQA HFLG+PECNV LAQC YLALAPKSIAVY A+ AAQKVVK+SVGQN Sbjct: 399 PSALTQAVACYQASHFLGMPECNVILAQCTAYLALAPKSIAVYRAIGAAQKVVKDSVGQN 458 Query: 452 EGVPLHLRNAPTKLMKDFDYGKGYIYPPHHPSSSLSQTYLPPSLQGCKFFDWP 294 EGVPLHLRNAPTKLMK+ YGK YIYPP PSS+ QTYLPPSL KF +WP Sbjct: 459 EGVPLHLRNAPTKLMKELGYGKEYIYPPSDPSSAAGQTYLPPSLLHHKFLEWP 511 >gb|ABH03541.1| putative Werner helicase-interacting protein [Arabidopsis thaliana] Length = 524 Score = 183 bits (465), Expect = 2e-44 Identities = 88/113 (77%), Positives = 95/113 (84%) Frame = -1 Query: 632 PNALCQAVACYQACHFLGLPECNVNLAQCVVYLALAPKSIAVYEALQAAQKVVKESVGQN 453 P+AL QAVACYQA HFLG+PECNV LAQC YLALAPKSIAVY A+ AAQKVVK+SVGQN Sbjct: 398 PSALTQAVACYQASHFLGMPECNVILAQCTAYLALAPKSIAVYRAIGAAQKVVKDSVGQN 457 Query: 452 EGVPLHLRNAPTKLMKDFDYGKGYIYPPHHPSSSLSQTYLPPSLQGCKFFDWP 294 EGVPLHLRNAPTKLMK+ YGK YIYPP PSS+ QTYLPPSL KF +WP Sbjct: 458 EGVPLHLRNAPTKLMKELGYGKEYIYPPSDPSSAAGQTYLPPSLLHHKFLEWP 510