BLASTX nr result

ID: Coptis21_contig00028334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028334
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trich...    92   8e-17
ref|XP_002513078.1| leucine-rich repeat-containing protein, puta...    75   1e-11
gb|AFC87871.1| RB-like protein, partial [Solanum demissum]             67   2e-09
gb|AFC87870.1| RB-like protein, partial [Solanum demissum]             67   2e-09
gb|AEK82097.1| blight resistance protein [Solanum demissum]            67   2e-09

>ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222845009|gb|EEE82556.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1093

 Score = 92.0 bits (227), Expect = 8e-17
 Identities = 56/176 (31%), Positives = 100/176 (56%), Gaps = 8/176 (4%)
 Frame = -2

Query: 528 FASAAVQVVLERLWDFMVREIGAMLNANEGFKKLERTLLRVQAMLDDVEDKEISHKAWKI 349
           F SA +QV LE L   ++RE GA +  ++  KKL RTL ++QA+L+D E ++I+  A K+
Sbjct: 9   FLSATLQVALENLASPILREFGARIGIDKDLKKLTRTLAKIQAVLNDAEARQINDMAVKL 68

Query: 348 WVRXXXXXXXXXXXXXDEIA-----MTSTSSSTRRVHMSSAPSFK---PHKMDDIQKKVD 193
           W+              DE+A           ++  + +S    FK     K+ +I +++D
Sbjct: 69  WLSDLKEVAYDADDVLDEVATEAFRFNQEKKASSLISLSKDFLFKLGLAPKIKEINERLD 128

Query: 192 EIAREMEYLYMSKLVGSSQIKTKERPPIGSLLMEDENGVFGRENDRTKLTNVLLSD 25
           EIA+E + L + +  G++ I+T++R  + +  + DE+ VFGR+ D+ ++ N+L+SD
Sbjct: 129 EIAKERDELGLREGAGATWIETRDRERLQTSSLIDESCVFGRKEDKKEIVNLLVSD 184


>ref|XP_002513078.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223548089|gb|EEF49581.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 1096

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 49/175 (28%), Positives = 94/175 (53%), Gaps = 5/175 (2%)
 Frame = -2

Query: 528 FASAAVQVVLERLWDFMVREIGAMLNANEGFKKLERTLLRVQAMLDDVEDKEISHKAWKI 349
           F SAA Q+ L  L   ++RE G     ++  +KL R L ++QA+L+D E K+I+  + K+
Sbjct: 8   FLSAAFQIALGHLASPILREFGCRFGIDKDLRKLTRNLSKIQAVLNDAEAKQITDYSVKL 67

Query: 348 WVRXXXXXXXXXXXXXDEIAMTSTSSSTRR--VHMSSAPSFK---PHKMDDIQKKVDEIA 184
           W+              DE++  +   + ++   ++ S   FK     K+ +I +++DEIA
Sbjct: 68  WLNELKEVAYDADDVLDEVSTQAFRYNQQKKVTNLFSDFMFKYELAPKIKEINERLDEIA 127

Query: 183 REMEYLYMSKLVGSSQIKTKERPPIGSLLMEDENGVFGRENDRTKLTNVLLSDSS 19
           ++   L + +    +  +T++R  + +  + DE+ VFGR +D+ KL  +L+SD +
Sbjct: 128 KQRNDLDLKEGTRVTLTETRDRDRLQTSSLIDESRVFGRTDDQKKLVELLVSDEN 182


>gb|AFC87871.1| RB-like protein, partial [Solanum demissum]
          Length = 181

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 4/173 (2%)
 Frame = -2

Query: 525 ASAAVQVVLERLWDFMVREIGAMLNANEGFKKLERTLLRVQAMLDDVEDKEISHKAWKIW 346
           A A +QV+LE +  F+  E+G +L     F+ +      +QA+L+D ++K++  KA K W
Sbjct: 2   AEAFIQVLLENITSFIQGELGLLLGFENDFENISSRFSTIQAVLEDAQEKQLKDKAIKNW 61

Query: 345 VRXXXXXXXXXXXXXDEIAMTSTSSSTRRVHMSSAPSFKPHK----MDDIQKKVDEIARE 178
           ++             DE        S    H   A  F+ HK    + ++ +K+D IA+E
Sbjct: 62  LQKLNAAAYKVDDLLDECKAARLEQSRLGRHHPKAIVFR-HKIGKRIKEMMEKLDAIAKE 120

Query: 177 MEYLYMSKLVGSSQIKTKERPPIGSLLMEDENGVFGRENDRTKLTNVLLSDSS 19
               ++ + +   Q+    RP  GS+L E +  VFGR+ +  ++  +L+++ S
Sbjct: 121 RTDFHLHEKIIERQV---ARPETGSVLTEPQ--VFGRDKEEDEIVKILINNVS 168


>gb|AFC87870.1| RB-like protein, partial [Solanum demissum]
          Length = 181

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 4/173 (2%)
 Frame = -2

Query: 525 ASAAVQVVLERLWDFMVREIGAMLNANEGFKKLERTLLRVQAMLDDVEDKEISHKAWKIW 346
           A A +QV+LE +  F+  E+G +L     F+ +      +QA+L+D ++K++  KA K W
Sbjct: 2   AEAFIQVLLENITSFIQGELGLLLGFENDFENISSRFSTIQAVLEDAQEKQLKDKAIKNW 61

Query: 345 VRXXXXXXXXXXXXXDEIAMTSTSSSTRRVHMSSAPSFKPHK----MDDIQKKVDEIARE 178
           ++             DE        S    H   A  F+ HK    + ++ +K+D IA+E
Sbjct: 62  LQKLNAAAYKVDDLLDECKAARLEQSRLGRHHPKAIVFR-HKIGKRIKEMMEKLDTIAKE 120

Query: 177 MEYLYMSKLVGSSQIKTKERPPIGSLLMEDENGVFGRENDRTKLTNVLLSDSS 19
               ++ + +   Q+    RP  GS+L E +  VFGR+ +  ++  +L+++ S
Sbjct: 121 RTDFHLHEKIIERQV---ARPETGSVLTEPQ--VFGRDKEEDEIVKILINNVS 168


>gb|AEK82097.1| blight resistance protein [Solanum demissum]
          Length = 179

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 4/173 (2%)
 Frame = -2

Query: 525 ASAAVQVVLERLWDFMVREIGAMLNANEGFKKLERTLLRVQAMLDDVEDKEISHKAWKIW 346
           A A +QV+LE +  F+  E+G +L     F+ +      +QA+L+D ++K++  KA K W
Sbjct: 2   AEAFIQVLLENITSFIQGELGLLLGFENDFENISSRFSTIQAVLEDAQEKQLKDKAIKNW 61

Query: 345 VRXXXXXXXXXXXXXDEIAMTSTSSSTRRVHMSSAPSFKPHK----MDDIQKKVDEIARE 178
           ++             DE        S    H   A  F+ HK    + ++ +K+D IA+E
Sbjct: 62  LQKLNAAAYKVDDLLDECKAARLEQSRLGRHHPKAIVFR-HKIGKRIKEMMEKLDTIAKE 120

Query: 177 MEYLYMSKLVGSSQIKTKERPPIGSLLMEDENGVFGRENDRTKLTNVLLSDSS 19
               ++ + +   Q+    RP  GS+L E +  VFGR+ +  ++  +L+++ S
Sbjct: 121 RTDFHLHEKIIERQV---ARPETGSVLTEPQ--VFGRDKEEDEIVKILINNVS 168


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