BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028327
         (1012 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containi...   216   9e-54
emb|CBI24422.3| unnamed protein product [Vitis vinifera]              216   9e-54
ref|XP_002299777.1| predicted protein [Populus trichocarpa] gi|2...   215   2e-53
ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containi...   206   6e-51
ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   197   3e-48

>ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
            chloroplastic-like [Vitis vinifera]
          Length = 518

 Score =  216 bits (549), Expect = 9e-54
 Identities = 106/162 (65%), Positives = 128/162 (79%)
 Frame = -1

Query: 1012 IAPRIEHYGCMVDLLSRAGRLEDAFSVIESMPMKPNEVVLGSLLAACRTRGNISFAERLM 833
            I+PRIEHYGC+VDL SRAGRLEDA +VI +MPMKPNEVVLGSLLAACRT G++  AERLM
Sbjct: 357  ISPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGDVGLAERLM 416

Query: 832  GYLVESKPDSDSNYIVLSNMYAAAGRWDGVGKVRRTMKAHGITKRRGVSAIEIDCSFHEF 653
             YL E  P SDSNY++LSN+YAA GRWDG  KVR+ MKA GI K+ G S+IE+D S HEF
Sbjct: 417  KYLCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGFSSIEMDGSIHEF 476

Query: 652  MAGDKSHMDSEYIYAILDQLSLESMLYGYVPETNLDDLSECD 527
            +AGDK+H++++ IYA+LD L LE  + GYVPE  +    E D
Sbjct: 477  VAGDKTHVETQNIYAMLDHLFLELRICGYVPEIEVGKSYEHD 518


>emb|CBI24422.3| unnamed protein product [Vitis vinifera]
          Length = 502

 Score =  216 bits (549), Expect = 9e-54
 Identities = 106/162 (65%), Positives = 128/162 (79%)
 Frame = -1

Query: 1012 IAPRIEHYGCMVDLLSRAGRLEDAFSVIESMPMKPNEVVLGSLLAACRTRGNISFAERLM 833
            I+PRIEHYGC+VDL SRAGRLEDA +VI +MPMKPNEVVLGSLLAACRT G++  AERLM
Sbjct: 341  ISPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGDVGLAERLM 400

Query: 832  GYLVESKPDSDSNYIVLSNMYAAAGRWDGVGKVRRTMKAHGITKRRGVSAIEIDCSFHEF 653
             YL E  P SDSNY++LSN+YAA GRWDG  KVR+ MKA GI K+ G S+IE+D S HEF
Sbjct: 401  KYLCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGFSSIEMDGSIHEF 460

Query: 652  MAGDKSHMDSEYIYAILDQLSLESMLYGYVPETNLDDLSECD 527
            +AGDK+H++++ IYA+LD L LE  + GYVPE  +    E D
Sbjct: 461  VAGDKTHVETQNIYAMLDHLFLELRICGYVPEIEVGKSYEHD 502


>ref|XP_002299777.1| predicted protein [Populus trichocarpa] gi|222847035|gb|EEE84582.1|
            predicted protein [Populus trichocarpa]
          Length = 439

 Score =  215 bits (547), Expect = 2e-53
 Identities = 104/158 (65%), Positives = 125/158 (79%)
 Frame = -1

Query: 1012 IAPRIEHYGCMVDLLSRAGRLEDAFSVIESMPMKPNEVVLGSLLAACRTRGNISFAERLM 833
            I+PRIEHYGC+VDL SRAGRLEDA SV+++MPMKPNEVV+GSLLAACRTRG++  AERLM
Sbjct: 278  ISPRIEHYGCIVDLYSRAGRLEDAMSVVQNMPMKPNEVVVGSLLAACRTRGDVELAERLM 337

Query: 832  GYLVESKPDSDSNYIVLSNMYAAAGRWDGVGKVRRTMKAHGITKRRGVSAIEIDCSFHEF 653
             YLV   P +DSNY++LSN+YAA GRWDG  K R TMKA GI K+ G S+IEI C  HEF
Sbjct: 338  NYLVHLDPGADSNYVLLSNIYAAVGRWDGACKQRMTMKALGIQKKPGFSSIEIGCDIHEF 397

Query: 652  MAGDKSHMDSEYIYAILDQLSLESMLYGYVPETNLDDL 539
            +AGDKSH  +E IY++L+ LS +  L GYVPE    D+
Sbjct: 398  VAGDKSHDKAEDIYSMLELLSFDQALCGYVPEAMAKDM 435


>ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
            chloroplastic-like [Glycine max]
          Length = 521

 Score =  206 bits (525), Expect = 6e-51
 Identities = 96/152 (63%), Positives = 121/152 (79%)
 Frame = -1

Query: 1012 IAPRIEHYGCMVDLLSRAGRLEDAFSVIESMPMKPNEVVLGSLLAACRTRGNISFAERLM 833
            I PRIEHYGC+VDL SRAGRLE+A +V+++MPMKPNEV+LGSLLAACRT+GNI  AE +M
Sbjct: 360  ILPRIEHYGCLVDLYSRAGRLEEALNVLKNMPMKPNEVILGSLLAACRTQGNIGLAENVM 419

Query: 832  GYLVESKPDSDSNYIVLSNMYAAAGRWDGVGKVRRTMKAHGITKRRGVSAIEIDCSFHEF 653
             YL+E     DSNY++LSN+YAA G+WDG  KVRR MK  GI K+ G S+IEID S H+F
Sbjct: 420  NYLIELDSGGDSNYVLLSNIYAAVGKWDGANKVRRRMKERGIQKKPGFSSIEIDSSIHKF 479

Query: 652  MAGDKSHMDSEYIYAILDQLSLESMLYGYVPE 557
            ++GDKSH + ++IYA L+ LS E  L GY+P+
Sbjct: 480  VSGDKSHEEKDHIYAALEFLSFELQLCGYIPD 511


>ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g05750, chloroplastic-like [Cucumis sativus]
          Length = 525

 Score =  197 bits (502), Expect = 3e-48
 Identities = 97/166 (58%), Positives = 122/166 (73%), Gaps = 9/166 (5%)
 Frame = -1

Query: 1012 IAPRIEHYGCMVDLLSRAGRLEDAFSVIESMPMKPNEVVLGSLLAACRTRGNISFAERLM 833
            I PRIEHYGC+VDL  RAGRLEDA ++IE MPMKPNEVVLGSLLAACRT G+++ AERLM
Sbjct: 360  ITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLM 419

Query: 832  GYLVESKPDSDSNYIVLSNMYAAAGRWDGVGKVRRTMKAHGITKRRGVSAIEIDCSFHEF 653
             +L +  P+ D+ Y++LSN+YAA G+WDG   VRRTMKA G+ K+ G S++EID   HEF
Sbjct: 420  KHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEF 479

Query: 652  MAGDKSHMDSEYIYAILDQLSLESMLYGYVP---------ETNLDD 542
            +AGD  H D++ IY++LD L  E  + GYVP         E+N DD
Sbjct: 480  VAGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKDD 525