BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028325
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322694.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
ref|NP_187990.1| pentatricopeptide repeat-containing protein [Ar...   123   2e-26
ref|XP_002882843.1| pentatricopeptide repeat-containing protein ...   122   4e-26
gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]        119   3e-25
ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [S...   119   3e-25

>ref|XP_002322694.1| predicted protein [Populus trichocarpa] gi|222867324|gb|EEF04455.1|
           predicted protein [Populus trichocarpa]
          Length = 586

 Score =  124 bits (312), Expect = 6e-27
 Identities = 53/75 (70%), Positives = 64/75 (85%)
 Frame = -1

Query: 298 ERMLLSHSEKLAIALGLIGTCSGVPIKVMKNLRICVDCHNFAKFVSKICKREISLRDSKR 119
           E++LL HSEKLA+A GLI T  GVP++V+KNLRICVDCHNFAKFVSK+  R++S+RD  R
Sbjct: 512 EKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNFAKFVSKVYGRQVSIRDKNR 571

Query: 118 FHHIVEGICSCGDYW 74
           FHH+  GICSCGDYW
Sbjct: 572 FHHVAGGICSCGDYW 586


>ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g13770, mitochondrial; Flags: Precursor
           gi|9294022|dbj|BAB01925.1| selenium-binding protein-like
           [Arabidopsis thaliana] gi|332641888|gb|AEE75409.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 628

 Score =  123 bits (308), Expect = 2e-26
 Identities = 54/75 (72%), Positives = 62/75 (82%)
 Frame = -1

Query: 298 ERMLLSHSEKLAIALGLIGTCSGVPIKVMKNLRICVDCHNFAKFVSKICKREISLRDSKR 119
           E+MLL HSEKLA+  GLI T  G+PI+V KNLRICVDCHNFAK  SK+ +RE+SLRD  R
Sbjct: 554 EKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNR 613

Query: 118 FHHIVEGICSCGDYW 74
           FH IV+GICSCGDYW
Sbjct: 614 FHQIVDGICSCGDYW 628


>ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297328683|gb|EFH59102.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 627

 Score =  122 bits (305), Expect = 4e-26
 Identities = 54/75 (72%), Positives = 62/75 (82%)
 Frame = -1

Query: 298 ERMLLSHSEKLAIALGLIGTCSGVPIKVMKNLRICVDCHNFAKFVSKICKREISLRDSKR 119
           E+MLL HSEKLA+  GLI T  G+PI+V KNLRICVDCHNFAK  SK+ +RE+SLRD  R
Sbjct: 553 EKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNR 612

Query: 118 FHHIVEGICSCGDYW 74
           FH IV+GICSCGDYW
Sbjct: 613 FHQIVKGICSCGDYW 627


>gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
          Length = 610

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/75 (74%), Positives = 61/75 (81%)
 Frame = -1

Query: 298 ERMLLSHSEKLAIALGLIGTCSGVPIKVMKNLRICVDCHNFAKFVSKICKREISLRDSKR 119
           ERMLL HSEKLAI  GL+ T S + I+VMKNLRICVDCHNFAKFVSK+  REISLRD  R
Sbjct: 536 ERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSKVYGREISLRDKNR 595

Query: 118 FHHIVEGICSCGDYW 74
           FH I EG C+CGDYW
Sbjct: 596 FHLITEGACTCGDYW 610


>ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
           gi|241916896|gb|EER90040.1| hypothetical protein
           SORBIDRAFT_10g024090 [Sorghum bicolor]
          Length = 588

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/75 (74%), Positives = 61/75 (81%)
 Frame = -1

Query: 298 ERMLLSHSEKLAIALGLIGTCSGVPIKVMKNLRICVDCHNFAKFVSKICKREISLRDSKR 119
           ERMLL HSEKLAI  GL+ T S + I+VMKNLRICVDCHNFAKFVSK+  REISLRD  R
Sbjct: 514 ERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSKVYGREISLRDKNR 573

Query: 118 FHHIVEGICSCGDYW 74
           FH I EG C+CGDYW
Sbjct: 574 FHLITEGACTCGDYW 588