BLASTX nr result

ID: Coptis21_contig00028295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028295
         (866 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632315.1| PREDICTED: uncharacterized protein LOC100852...   187   3e-45
ref|XP_002278974.1| PREDICTED: uncharacterized protein LOC100257...   182   9e-44
ref|XP_002517105.1| lipid binding protein, putative [Ricinus com...   178   1e-42
emb|CBI26282.3| unnamed protein product [Vitis vinifera]              176   5e-42
ref|XP_002315761.1| predicted protein [Populus trichocarpa] gi|2...   173   4e-41

>ref|XP_003632315.1| PREDICTED: uncharacterized protein LOC100852532 [Vitis vinifera]
          Length = 214

 Score =  187 bits (474), Expect = 3e-45
 Identities = 98/215 (45%), Positives = 134/215 (62%), Gaps = 3/215 (1%)
 Frame = -3

Query: 783 MEATKWLGRENALLMMVLLISIMPSNSQITTPCTASMITSFTPCMNFITGSTANGSGLPT 604
           ME  K      A+   +L IS++ +N+QI+TPCT SMI+SFTPC+NFITGST+     PT
Sbjct: 1   MEGLKAFQHMVAVYTTLLAISVISANAQISTPCTTSMISSFTPCLNFITGSTSGNGSSPT 60

Query: 603 SQCCGSVKTLLSSGMDCACLLLTANVPFQLPINRTLSISLPRACKLGGVPVQCKGSAAPL 424
           + CC S+++L S+ MDCACL++T +VP QLPINRTL+ISLPRAC +G VP+QCK S  PL
Sbjct: 61  AGCCSSLRSLTSTTMDCACLIITGSVPLQLPINRTLAISLPRACNMGSVPIQCKASGTPL 120

Query: 423 XXXXXXXXXXXXXXXXXXXXXXXXPESTSPAL--APQSDTTDLIPTASSPADSNTP-VSI 253
                                    ++ +  L  AP+ +T   +  AS P DS TP  + 
Sbjct: 121 PAPGPVLLGPTLPPPAAAPLSPRASKAAAATLAPAPEPETAIELSPASPPVDSETPTTTT 180

Query: 252 PGRRPVVTPNAAAKTSHISSPYIIFVLGVLVLNYY 148
           PG RPV+TP +A+  S+ISSP ++ VLG++ L  Y
Sbjct: 181 PGIRPVLTP-SASNPSYISSPLLLIVLGIMFLKCY 214


>ref|XP_002278974.1| PREDICTED: uncharacterized protein LOC100257872 [Vitis vinifera]
          Length = 217

 Score =  182 bits (462), Expect = 9e-44
 Identities = 92/205 (44%), Positives = 128/205 (62%), Gaps = 6/205 (2%)
 Frame = -3

Query: 744 LMMVLLISIMPSNSQITTPCTASMITSFTPCMNFITGSTANGSGLPTSQCCGSVKTLLSS 565
           L + L++ IMP   QI+T C+ASMI+SFTPC+NF+T S+ NG+  PT+ CC ++++L S+
Sbjct: 14  LAIALMVVIMPVQGQISTSCSASMISSFTPCINFVTNSSGNGTS-PTADCCNALRSLTST 72

Query: 564 GMDCACLLLTANVPFQLPINRTLSISLPRACKLGGVPVQCKGSAAPLXXXXXXXXXXXXX 385
            MDC CL++T +VPFQ+PINRTL+ISLPRAC    VPVQCK + AP+             
Sbjct: 73  SMDCLCLIVTGSVPFQMPINRTLAISLPRACNTASVPVQCKATGAPVPAPGPAALGPTLS 132

Query: 384 XXXXXXXXXXXPE------STSPALAPQSDTTDLIPTASSPADSNTPVSIPGRRPVVTPN 223
                      P+      STSPALAP SDTT  +   S   DS+ P +  G RPV+TP+
Sbjct: 133 PQATPSPTGPSPKASSVPGSTSPALAPGSDTTPSLTPDSPTVDSDAPTTTTGSRPVLTPS 192

Query: 222 AAAKTSHISSPYIIFVLGVLVLNYY 148
           A  +   +S   ++FVLG++ + YY
Sbjct: 193 AGNRPQSLSPSLVLFVLGIIFIMYY 217


>ref|XP_002517105.1| lipid binding protein, putative [Ricinus communis]
           gi|223543740|gb|EEF45268.1| lipid binding protein,
           putative [Ricinus communis]
          Length = 206

 Score =  178 bits (452), Expect = 1e-42
 Identities = 94/200 (47%), Positives = 123/200 (61%), Gaps = 1/200 (0%)
 Frame = -3

Query: 744 LMMVLLISIMPSNSQITTPCTASMITSFTPCMNFITGSTANGSGLPTSQCCGSVKTLLSS 565
           L + L+  I P++ QI TPCT S+++ FTPCM+F+T STANG+  PTS CC S+K L  +
Sbjct: 14  LAVALIFLIFPAHGQINTPCTPSLLSVFTPCMSFLTNSTANGTS-PTSDCCSSLKNLTGN 72

Query: 564 GMDCACLLLTANVPFQLPINRTLSISLPRACKLGGVPVQCKGSAAPLXXXXXXXXXXXXX 385
           GMDC CL++T +VPFQ+PINRTL+ISLPRAC + GVPVQCKG   P              
Sbjct: 73  GMDCLCLIVTGSVPFQIPINRTLAISLPRACNMAGVPVQCKG---PASLGPTPSPRISPS 129

Query: 384 XXXXXXXXXXXPESTSPALAPQSDTTDLIPTASSPADSNTPVSIPGRRPVVTPNAAAKTS 205
                        STSP   P+S TT ++  +S   D+  P S  G RPV+TP +AA  S
Sbjct: 130 ASPKASVVPEPTPSTSP---PESSTTPVLTPSSPTVDTGAPTSTTGSRPVLTPPSAAIPS 186

Query: 204 HISSP-YIIFVLGVLVLNYY 148
           +  SP  ++F +G LVL YY
Sbjct: 187 YSISPSVLLFAIGFLVLKYY 206


>emb|CBI26282.3| unnamed protein product [Vitis vinifera]
          Length = 195

 Score =  176 bits (447), Expect = 5e-42
 Identities = 89/196 (45%), Positives = 122/196 (62%), Gaps = 6/196 (3%)
 Frame = -3

Query: 717 MPSNSQITTPCTASMITSFTPCMNFITGSTANGSGLPTSQCCGSVKTLLSSGMDCACLLL 538
           MP   QI+T C+ASMI+SFTPC+NF+T S+ NG+  PT+ CC ++++L S+ MDC CL++
Sbjct: 1   MPVQGQISTSCSASMISSFTPCINFVTNSSGNGTS-PTADCCNALRSLTSTSMDCLCLIV 59

Query: 537 TANVPFQLPINRTLSISLPRACKLGGVPVQCKGSAAPLXXXXXXXXXXXXXXXXXXXXXX 358
           T +VPFQ+PINRTL+ISLPRAC    VPVQCK + AP+                      
Sbjct: 60  TGSVPFQMPINRTLAISLPRACNTASVPVQCKATGAPVPAPGPAALGPTLSPQATPSPTG 119

Query: 357 XXPE------STSPALAPQSDTTDLIPTASSPADSNTPVSIPGRRPVVTPNAAAKTSHIS 196
             P+      STSPALAP SDTT  +   S   DS+ P +  G RPV+TP+A  +   +S
Sbjct: 120 PSPKASSVPGSTSPALAPGSDTTPSLTPDSPTVDSDAPTTTTGSRPVLTPSAGNRPQSLS 179

Query: 195 SPYIIFVLGVLVLNYY 148
              ++FVLG++ + YY
Sbjct: 180 PSLVLFVLGIIFIMYY 195


>ref|XP_002315761.1| predicted protein [Populus trichocarpa] gi|222864801|gb|EEF01932.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score =  173 bits (439), Expect = 4e-41
 Identities = 90/200 (45%), Positives = 120/200 (60%), Gaps = 1/200 (0%)
 Frame = -3

Query: 744 LMMVLLISIMPSNSQITTPCTASMITSFTPCMNFITGSTANGSGLPTSQCCGSVKTLLSS 565
           L + L + I+P   QI T CTAS++ +FTPCMNF+T STA     PT+ CCG++K L S+
Sbjct: 5   LAVALAVMILPVYGQINTACTASVLATFTPCMNFLTNSTAANGTSPTAGCCGALKNLTSN 64

Query: 564 GMDCACLLLTANVPFQLPINRTLSISLPRACKLGGVPVQCKGSAAPLXXXXXXXXXXXXX 385
           GMDC CL++T +VPF +PINRTL+ISLPRAC + GVPVQCK + +P+             
Sbjct: 65  GMDCFCLIVTGSVPFSIPINRTLAISLPRACNMPGVPVQCKATGSPI------------- 111

Query: 384 XXXXXXXXXXXPESTSPALAPQSDTTDLIPTASSPADSNTPVSIPGRRPVVTPNAAAKTS 205
                      PE T   L P SDTT L+   SS  D+  P S  G RPV+TP +A+  S
Sbjct: 112 ----PAPAPVVPEPTPSTLPPVSDTTPLLTPPSSTGDTGAPTSTTGSRPVLTPPSASAPS 167

Query: 204 HISSP-YIIFVLGVLVLNYY 148
           H  SP  ++F +G ++   Y
Sbjct: 168 HSLSPSLLLFAVGFVLFKCY 187


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