BLASTX nr result

ID: Coptis21_contig00028280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028280
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67841.1| hypothetical protein VITISV_016664 [Vitis vinifera]   101   5e-20
ref|XP_002520706.1| stromal antigen, putative [Ricinus communis]...   100   9e-20
ref|XP_002270509.2| PREDICTED: cohesin subunit SA-1-like [Vitis ...   100   1e-19
emb|CBI32283.3| unnamed protein product [Vitis vinifera]              100   1e-19
ref|XP_002301633.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19

>emb|CAN67841.1| hypothetical protein VITISV_016664 [Vitis vinifera]
          Length = 1616

 Score =  101 bits (252), Expect = 5e-20
 Identities = 50/81 (61%), Positives = 56/81 (69%)
 Frame = -1

Query: 245 EACGAKYNXXXXXXXXXXXXXXXXXXXXXXARKGEVEDYHSSKRKEFKNFKENLVSFWDN 66
           EACGAKY+                       RKGE EDY SSK+KEFKNFK+NLVSFWDN
Sbjct: 506 EACGAKYHLREELLDETDVDDVVVALVNLA-RKGEAEDYQSSKKKEFKNFKDNLVSFWDN 564

Query: 65  LVIECQNGPLFDKVLFEKCMD 3
           LVIECQNGPLFD+VLF+KC+D
Sbjct: 565 LVIECQNGPLFDQVLFDKCVD 585


>ref|XP_002520706.1| stromal antigen, putative [Ricinus communis]
           gi|223540091|gb|EEF41668.1| stromal antigen, putative
           [Ricinus communis]
          Length = 1106

 Score =  100 bits (250), Expect = 9e-20
 Identities = 51/81 (62%), Positives = 56/81 (69%)
 Frame = -1

Query: 245 EACGAKYNXXXXXXXXXXXXXXXXXXXXXXARKGEVEDYHSSKRKEFKNFKENLVSFWDN 66
           EACGAK+                       ARKGEVEDY SSKRK+ KNFK+NLVSFWDN
Sbjct: 109 EACGAKF-CIKEELLDETDVDDVVVALVNLARKGEVEDYQSSKRKDVKNFKDNLVSFWDN 167

Query: 65  LVIECQNGPLFDKVLFEKCMD 3
           LV+ECQNGPLFDKVLF+KCMD
Sbjct: 168 LVVECQNGPLFDKVLFDKCMD 188


>ref|XP_002270509.2| PREDICTED: cohesin subunit SA-1-like [Vitis vinifera]
          Length = 1143

 Score =  100 bits (249), Expect = 1e-19
 Identities = 49/81 (60%), Positives = 56/81 (69%)
 Frame = -1

Query: 245 EACGAKYNXXXXXXXXXXXXXXXXXXXXXXARKGEVEDYHSSKRKEFKNFKENLVSFWDN 66
           EACGAKY+                       R+GE EDY SSK+KEFKNFK+NLVSFWDN
Sbjct: 120 EACGAKYHLREELLDETDVDDVVVALVNLA-RRGEAEDYQSSKKKEFKNFKDNLVSFWDN 178

Query: 65  LVIECQNGPLFDKVLFEKCMD 3
           LVIECQNGPLFD+VLF+KC+D
Sbjct: 179 LVIECQNGPLFDQVLFDKCVD 199


>emb|CBI32283.3| unnamed protein product [Vitis vinifera]
          Length = 1144

 Score =  100 bits (249), Expect = 1e-19
 Identities = 49/81 (60%), Positives = 56/81 (69%)
 Frame = -1

Query: 245 EACGAKYNXXXXXXXXXXXXXXXXXXXXXXARKGEVEDYHSSKRKEFKNFKENLVSFWDN 66
           EACGAKY+                       R+GE EDY SSK+KEFKNFK+NLVSFWDN
Sbjct: 120 EACGAKYHLREELLDETDVDDVVVALVNLA-RRGEAEDYQSSKKKEFKNFKDNLVSFWDN 178

Query: 65  LVIECQNGPLFDKVLFEKCMD 3
           LVIECQNGPLFD+VLF+KC+D
Sbjct: 179 LVIECQNGPLFDQVLFDKCVD 199


>ref|XP_002301633.1| predicted protein [Populus trichocarpa] gi|222843359|gb|EEE80906.1|
           predicted protein [Populus trichocarpa]
          Length = 928

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 47/81 (58%), Positives = 55/81 (67%)
 Frame = -1

Query: 245 EACGAKYNXXXXXXXXXXXXXXXXXXXXXXARKGEVEDYHSSKRKEFKNFKENLVSFWDN 66
           +ACGAKY+                       R GEVEDY SSKRK+FK+FK+NL++FWDN
Sbjct: 4   QACGAKYSIKKELLDETDVDDVVVALVNLA-RNGEVEDYQSSKRKDFKHFKDNLITFWDN 62

Query: 65  LVIECQNGPLFDKVLFEKCMD 3
           LV ECQNGPLFDKVLF+KCMD
Sbjct: 63  LVTECQNGPLFDKVLFDKCMD 83