BLASTX nr result
ID: Coptis21_contig00028280
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00028280 (245 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN67841.1| hypothetical protein VITISV_016664 [Vitis vinifera] 101 5e-20 ref|XP_002520706.1| stromal antigen, putative [Ricinus communis]... 100 9e-20 ref|XP_002270509.2| PREDICTED: cohesin subunit SA-1-like [Vitis ... 100 1e-19 emb|CBI32283.3| unnamed protein product [Vitis vinifera] 100 1e-19 ref|XP_002301633.1| predicted protein [Populus trichocarpa] gi|2... 98 8e-19 >emb|CAN67841.1| hypothetical protein VITISV_016664 [Vitis vinifera] Length = 1616 Score = 101 bits (252), Expect = 5e-20 Identities = 50/81 (61%), Positives = 56/81 (69%) Frame = -1 Query: 245 EACGAKYNXXXXXXXXXXXXXXXXXXXXXXARKGEVEDYHSSKRKEFKNFKENLVSFWDN 66 EACGAKY+ RKGE EDY SSK+KEFKNFK+NLVSFWDN Sbjct: 506 EACGAKYHLREELLDETDVDDVVVALVNLA-RKGEAEDYQSSKKKEFKNFKDNLVSFWDN 564 Query: 65 LVIECQNGPLFDKVLFEKCMD 3 LVIECQNGPLFD+VLF+KC+D Sbjct: 565 LVIECQNGPLFDQVLFDKCVD 585 >ref|XP_002520706.1| stromal antigen, putative [Ricinus communis] gi|223540091|gb|EEF41668.1| stromal antigen, putative [Ricinus communis] Length = 1106 Score = 100 bits (250), Expect = 9e-20 Identities = 51/81 (62%), Positives = 56/81 (69%) Frame = -1 Query: 245 EACGAKYNXXXXXXXXXXXXXXXXXXXXXXARKGEVEDYHSSKRKEFKNFKENLVSFWDN 66 EACGAK+ ARKGEVEDY SSKRK+ KNFK+NLVSFWDN Sbjct: 109 EACGAKF-CIKEELLDETDVDDVVVALVNLARKGEVEDYQSSKRKDVKNFKDNLVSFWDN 167 Query: 65 LVIECQNGPLFDKVLFEKCMD 3 LV+ECQNGPLFDKVLF+KCMD Sbjct: 168 LVVECQNGPLFDKVLFDKCMD 188 >ref|XP_002270509.2| PREDICTED: cohesin subunit SA-1-like [Vitis vinifera] Length = 1143 Score = 100 bits (249), Expect = 1e-19 Identities = 49/81 (60%), Positives = 56/81 (69%) Frame = -1 Query: 245 EACGAKYNXXXXXXXXXXXXXXXXXXXXXXARKGEVEDYHSSKRKEFKNFKENLVSFWDN 66 EACGAKY+ R+GE EDY SSK+KEFKNFK+NLVSFWDN Sbjct: 120 EACGAKYHLREELLDETDVDDVVVALVNLA-RRGEAEDYQSSKKKEFKNFKDNLVSFWDN 178 Query: 65 LVIECQNGPLFDKVLFEKCMD 3 LVIECQNGPLFD+VLF+KC+D Sbjct: 179 LVIECQNGPLFDQVLFDKCVD 199 >emb|CBI32283.3| unnamed protein product [Vitis vinifera] Length = 1144 Score = 100 bits (249), Expect = 1e-19 Identities = 49/81 (60%), Positives = 56/81 (69%) Frame = -1 Query: 245 EACGAKYNXXXXXXXXXXXXXXXXXXXXXXARKGEVEDYHSSKRKEFKNFKENLVSFWDN 66 EACGAKY+ R+GE EDY SSK+KEFKNFK+NLVSFWDN Sbjct: 120 EACGAKYHLREELLDETDVDDVVVALVNLA-RRGEAEDYQSSKKKEFKNFKDNLVSFWDN 178 Query: 65 LVIECQNGPLFDKVLFEKCMD 3 LVIECQNGPLFD+VLF+KC+D Sbjct: 179 LVIECQNGPLFDQVLFDKCVD 199 >ref|XP_002301633.1| predicted protein [Populus trichocarpa] gi|222843359|gb|EEE80906.1| predicted protein [Populus trichocarpa] Length = 928 Score = 97.8 bits (242), Expect = 8e-19 Identities = 47/81 (58%), Positives = 55/81 (67%) Frame = -1 Query: 245 EACGAKYNXXXXXXXXXXXXXXXXXXXXXXARKGEVEDYHSSKRKEFKNFKENLVSFWDN 66 +ACGAKY+ R GEVEDY SSKRK+FK+FK+NL++FWDN Sbjct: 4 QACGAKYSIKKELLDETDVDDVVVALVNLA-RNGEVEDYQSSKRKDFKHFKDNLITFWDN 62 Query: 65 LVIECQNGPLFDKVLFEKCMD 3 LV ECQNGPLFDKVLF+KCMD Sbjct: 63 LVTECQNGPLFDKVLFDKCMD 83