BLASTX nr result

ID: Coptis21_contig00028271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028271
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146249.1| PREDICTED: xylosyltransferase 2-like [Cucumi...   104   6e-21
ref|XP_002329084.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002317501.1| predicted protein [Populus trichocarpa] gi|2...   100   9e-20
ref|XP_002285024.2| PREDICTED: xylosyltransferase oxt [Vitis vin...   100   1e-19
ref|XP_002533550.1| acetylglucosaminyltransferase, putative [Ric...    99   4e-19

>ref|XP_004146249.1| PREDICTED: xylosyltransferase 2-like [Cucumis sativus]
           gi|449526205|ref|XP_004170104.1| PREDICTED:
           xylosyltransferase 2-like [Cucumis sativus]
          Length = 420

 Score =  104 bits (260), Expect = 6e-21
 Identities = 56/98 (57%), Positives = 70/98 (71%), Gaps = 5/98 (5%)
 Frame = -3

Query: 282 MGPLNVEKKWVFPFVISLLICVFLTITSLNMGLVSS-----NIFSIFPGRGSVNQTSGMF 118
           MG LN+E+KW+FP VIS LICVFL +T  NMGLVSS     ++F+IFPGR +++ TS +F
Sbjct: 1   MGSLNLERKWLFPLVISSLICVFLLVTFFNMGLVSSLYTINSLFAIFPGRMTMDNTSAVF 60

Query: 117 VETKISSXXXXXXXXXXPRLAYLVSGSKGDLEKLWRTL 4
            E+KI+           PR AYL+SGSKGDLEKLWR L
Sbjct: 61  AESKIAQ-PSTPAGPTIPRFAYLISGSKGDLEKLWRIL 97


>ref|XP_002329084.1| predicted protein [Populus trichocarpa] gi|222869753|gb|EEF06884.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score =  103 bits (257), Expect = 1e-20
 Identities = 58/98 (59%), Positives = 66/98 (67%), Gaps = 5/98 (5%)
 Frame = -3

Query: 282 MGPLNVEKKWVFPFVISLLICVFLTITSLNMGLVSS-----NIFSIFPGRGSVNQTSGMF 118
           MG LNVEK+W FP VIS LIC+FL  T  NMGLVSS      IF+IF  R  +NQT+ ++
Sbjct: 1   MGSLNVEKRWAFPLVISSLICLFLLATCFNMGLVSSLHTINQIFNIFQFR--INQTTEVY 58

Query: 117 VETKISSXXXXXXXXXXPRLAYLVSGSKGDLEKLWRTL 4
            ETK+S           PR AYLVSGSKGDLEKLWRTL
Sbjct: 59  AETKVSQSPPPPLPSQIPRFAYLVSGSKGDLEKLWRTL 96


>ref|XP_002317501.1| predicted protein [Populus trichocarpa] gi|222860566|gb|EEE98113.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score =  100 bits (250), Expect = 9e-20
 Identities = 59/98 (60%), Positives = 64/98 (65%), Gaps = 5/98 (5%)
 Frame = -3

Query: 282 MGPLNVEKKWVFPFVISLLICVFLTITSLNMGLVSS-----NIFSIFPGRGSVNQTSGMF 118
           MG LNVEKKW FP VIS LIC+FL  T  NMGLVSS      IF+IFP R   NQT+  +
Sbjct: 1   MGSLNVEKKWGFPLVISSLICLFLLATCFNMGLVSSLHTINQIFNIFPFR--TNQTTQGY 58

Query: 117 VETKISSXXXXXXXXXXPRLAYLVSGSKGDLEKLWRTL 4
            E K+S           PR AYLVSGSKGDLEKLWRTL
Sbjct: 59  AEKKVSLSPSPPLPSKIPRFAYLVSGSKGDLEKLWRTL 96


>ref|XP_002285024.2| PREDICTED: xylosyltransferase oxt [Vitis vinifera]
          Length = 422

 Score =  100 bits (249), Expect = 1e-19
 Identities = 54/99 (54%), Positives = 64/99 (64%), Gaps = 5/99 (5%)
 Frame = -3

Query: 285 VMGPLNVEKKWVFPFVISLLICVFLTITSLNMGLVSS-----NIFSIFPGRGSVNQTSGM 121
           +MG  N+EKKW FP  IS LIC+FL  TS NMGL+SS     +IFSIF    S NQT+ +
Sbjct: 1   MMGSFNMEKKWAFPLAISSLICMFLLATSFNMGLLSSLHPINSIFSIFSPGLSTNQTNPV 60

Query: 120 FVETKISSXXXXXXXXXXPRLAYLVSGSKGDLEKLWRTL 4
           F E K+            PR AYL+SGS+GDLEKLWRTL
Sbjct: 61  FAEQKVGQPPPPPTTPNIPRFAYLISGSRGDLEKLWRTL 99


>ref|XP_002533550.1| acetylglucosaminyltransferase, putative [Ricinus communis]
           gi|223526575|gb|EEF28830.1|
           acetylglucosaminyltransferase, putative [Ricinus
           communis]
          Length = 417

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 56/98 (57%), Positives = 66/98 (67%), Gaps = 5/98 (5%)
 Frame = -3

Query: 282 MGPLNVEKKWVFPFVISLLICVFLTITSLNMGLVSS-----NIFSIFPGRGSVNQTSGMF 118
           MG LN+EKKWVFP VIS LICVFL  TS NMGL+SS      IF+IFP R  +NQ+   +
Sbjct: 1   MGSLNMEKKWVFPLVISSLICVFLLATSFNMGLISSLHTINQIFNIFPSR--INQSVDGY 58

Query: 117 VETKISSXXXXXXXXXXPRLAYLVSGSKGDLEKLWRTL 4
            E ++S           PR AYL+SGSKGDL+KLWRTL
Sbjct: 59  AEMRVSQ--SPPQTSGLPRFAYLISGSKGDLDKLWRTL 94


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