BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028243
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320885.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_002523293.1| ATP synthase delta chain, putative [Ricinus ...    66   3e-09
ref|XP_004134294.1| PREDICTED: ATP synthase delta chain, chlorop...    57   1e-06

>ref|XP_002320885.1| predicted protein [Populus trichocarpa] gi|222861658|gb|EEE99200.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 9/100 (9%)
 Frame = +1

Query: 7   RPTSFFPNKAPVFTSPF---NYTTPI------SSLKAALPIVNRKATSGYAAALLDIARC 159
           +PTS   N+ P  T      N   P+      SS   + P  +R   SGYAAAL+DIARC
Sbjct: 82  KPTSSISNRTPSKTKTLSFKNLNLPLFSNISQSSSHNSSPHSHRNPVSGYAAALVDIARC 141

Query: 160 DNTLDIVDKDVRRLSRLLHNADIRAIMVNPLINANVKGRV 279
            ++LDIV  DV++L +LL N  I+A++ +P +    KG+V
Sbjct: 142 KSSLDIVQNDVQKLLKLLQNEQIQAVLGSPFVGDKEKGQV 181


>ref|XP_002523293.1| ATP synthase delta chain, putative [Ricinus communis]
           gi|223537381|gb|EEF39009.1| ATP synthase delta chain,
           putative [Ricinus communis]
          Length = 227

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/61 (50%), Positives = 45/61 (73%)
 Frame = +1

Query: 97  PIVNRKATSGYAAALLDIARCDNTLDIVDKDVRRLSRLLHNADIRAIMVNPLINANVKGR 276
           P  ++   +GYAAALLDIA+ +N+L+ V+KDV+RLS+LL N  I+ I++NPL+    KG 
Sbjct: 73  PNTHQNPATGYAAALLDIAQFNNSLETVEKDVKRLSKLLRNEQIQCILINPLVGDKEKGL 132

Query: 277 V 279
           V
Sbjct: 133 V 133


>ref|XP_004134294.1| PREDICTED: ATP synthase delta chain, chloroplastic-like [Cucumis
           sativus] gi|449478221|ref|XP_004155254.1| PREDICTED: ATP
           synthase delta chain, chloroplastic-like [Cucumis
           sativus]
          Length = 227

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 15/105 (14%)
 Frame = +1

Query: 10  PTSFFPNKAPVFTS-----PFNYTTPISSLKAALP----------IVNRKATSGYAAALL 144
           PT+  P+++P  TS     P N+ +   +L  ++P          +++R+  SGYAAALL
Sbjct: 32  PTAHLPHRSPSRTSNSISKPPNFLSTPQTLNPSIPFSTPRRSSSPLLHRRPASGYAAALL 91

Query: 145 DIARCDNTLDIVDKDVRRLSRLLHNADIRAIMVNPLINANVKGRV 279
           D ++   T+  V KDV R S+LL    I  ++ +PL+    KGR+
Sbjct: 92  DASQSTGTIHSVAKDVGRFSKLLRGKRIGRVLNDPLVGDEEKGRL 136