BLASTX nr result

ID: Coptis21_contig00028240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028240
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62047.1| hypothetical protein VITISV_026044 [Vitis vinifera]   124   8e-27
ref|XP_002278924.2| PREDICTED: putative UPF0481 protein At3g0264...   122   3e-26
ref|XP_002530454.1| conserved hypothetical protein [Ricinus comm...   110   2e-22
ref|XP_002313925.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
emb|CAN79320.1| hypothetical protein VITISV_029316 [Vitis vinifera]   107   1e-21

>emb|CAN62047.1| hypothetical protein VITISV_026044 [Vitis vinifera]
          Length = 551

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/110 (54%), Positives = 79/110 (71%), Gaps = 5/110 (4%)
 Frame = -1

Query: 317 SLSKFDCVKQHFDELWGFLSKLKRGPVPYIKRVLFSKPLKILGNLPWTIVSRLPGFKLIA 138
           S   +  V+Q F+E+W  LSKL RGPV  +KR++FSKP+K++  LPWTIVS LPGF ++ 
Sbjct: 268 SFGDYSYVQQLFEEIWKLLSKLNRGPVRILKRIIFSKPVKVILKLPWTIVSNLPGFAILK 327

Query: 137 QPIKYFFSHGDKEEAKPE-----DSTKAQKPPLVEEIMIPSVTELFQSGV 3
           QP++YFF   DKEE KPE      ++   KPPL+EEI IPSV+EL +SGV
Sbjct: 328 QPVEYFFFSQDKEENKPEHGNSKSNSSIVKPPLIEEITIPSVSELSKSGV 377


>ref|XP_002278924.2| PREDICTED: putative UPF0481 protein At3g02645-like [Vitis vinifera]
          Length = 551

 Score =  122 bits (306), Expect = 3e-26
 Identities = 58/103 (56%), Positives = 78/103 (75%), Gaps = 5/103 (4%)
 Frame = -1

Query: 296 VKQHFDELWGFLSKLKRGPVPYIKRVLFSKPLKILGNLPWTIVSRLPGFKLIAQPIKYFF 117
           V+Q F+E+W  LSK+ RGPV  +KR++FSKP+K++  LPWTIVS LPGF ++ QP++YFF
Sbjct: 275 VQQLFEEIWKLLSKMNRGPVRILKRIIFSKPVKVILKLPWTIVSNLPGFAILKQPVEYFF 334

Query: 116 SHGDKEEAKPED-----STKAQKPPLVEEIMIPSVTELFQSGV 3
              DKEE KPE+     ++   KPPL+EEI IPSV+EL +SGV
Sbjct: 335 FSQDKEENKPENGNSKSNSSIVKPPLIEEITIPSVSELSKSGV 377


>ref|XP_002530454.1| conserved hypothetical protein [Ricinus communis]
           gi|223529999|gb|EEF31924.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 531

 Score =  110 bits (274), Expect = 2e-22
 Identities = 52/101 (51%), Positives = 74/101 (73%), Gaps = 3/101 (2%)
 Frame = -1

Query: 296 VKQHFDELWGFLSKLKRGPVPYIKRVLFSKPLKILGNLPWTIVSRLPGFKLIAQPIKYFF 117
           VK  FD++   +SK+ +GP+  +K+++FSKP+K++  LPW I+S LPGF ++ QP+ Y  
Sbjct: 287 VKDLFDQILKIISKVNKGPLKILKKLIFSKPIKLILKLPWKILSNLPGFSILKQPVDYLM 346

Query: 116 SHGDKEEAKPED---STKAQKPPLVEEIMIPSVTELFQSGV 3
           S  DKEE KPE+   +++A KPPLVEEI IPSV EL +SGV
Sbjct: 347 SAEDKEEIKPENDSSNSEANKPPLVEEIAIPSVAELSKSGV 387


>ref|XP_002313925.1| predicted protein [Populus trichocarpa] gi|222850333|gb|EEE87880.1|
           predicted protein [Populus trichocarpa]
          Length = 559

 Score =  108 bits (269), Expect = 6e-22
 Identities = 49/101 (48%), Positives = 72/101 (71%), Gaps = 3/101 (2%)
 Frame = -1

Query: 296 VKQHFDELWGFLSKLKRGPVPYIKRVLFSKPLKILGNLPWTIVSRLPGFKLIAQPIKYFF 117
           ++  F E+W  +++L +GPV  +KR+LFS+P K++  LPWTI+S LPGF ++ QP+++ F
Sbjct: 284 IRDLFSEIWKIITRLNKGPVRLLKRLLFSRPCKVILKLPWTILSNLPGFSILKQPLQHLF 343

Query: 116 SHGDKEEAKPED---STKAQKPPLVEEIMIPSVTELFQSGV 3
              D+EE KPE+     +  +PPLVEEI IP VTEL +SGV
Sbjct: 344 FSQDQEEIKPENENSDNEVNRPPLVEEITIPCVTELSKSGV 384


>emb|CAN79320.1| hypothetical protein VITISV_029316 [Vitis vinifera]
          Length = 477

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/105 (48%), Positives = 71/105 (67%)
 Frame = -1

Query: 317 SLSKFDCVKQHFDELWGFLSKLKRGPVPYIKRVLFSKPLKILGNLPWTIVSRLPGFKLIA 138
           S    + V+Q F  +W  LS   +GP+  +KR+L S P+K++  LPWTIVS+LPGF ++ 
Sbjct: 198 SFGBSNYVQQLFQIIWNLLSTCTQGPIRLLKRLLLSDPVKVILKLPWTIVSKLPGFSILK 257

Query: 137 QPIKYFFSHGDKEEAKPEDSTKAQKPPLVEEIMIPSVTELFQSGV 3
           QP++  F   +KEE KPE+     KPPL+EEI IPSV+EL +SGV
Sbjct: 258 QPVEDIFFSQNKEENKPENGNNIIKPPLIEEIAIPSVSELSKSGV 302


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