BLASTX nr result

ID: Coptis21_contig00028238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028238
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20827.3| unnamed protein product [Vitis vinifera]               59   3e-07
ref|XP_002281057.1| PREDICTED: uncharacterized protein LOC100250...    59   3e-07
ref|XP_003549214.1| PREDICTED: uncharacterized protein LOC100813...    56   3e-06
ref|XP_003539141.1| PREDICTED: uncharacterized protein LOC100803...    56   3e-06

>emb|CBI20827.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
 Frame = -1

Query: 200 KRAEVIQRPKAHLSKKNAKVANLIARRKERLNLPNYD-DECQKLYPISKFLSQPSGFESI 24
           +R +VI+  KA+LS    K A L A RKER+ LPNYD     K + I +FLS PSG E+I
Sbjct: 22  RRIQVIKVHKANLSDSKQKKAYLFATRKERIGLPNYDVGSGGKTFHIREFLSDPSGVEAI 81

Query: 23  LNTKA 9
           LN KA
Sbjct: 82  LNAKA 86


>ref|XP_002281057.1| PREDICTED: uncharacterized protein LOC100250928 [Vitis vinifera]
          Length = 232

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
 Frame = -1

Query: 200 KRAEVIQRPKAHLSKKNAKVANLIARRKERLNLPNYD-DECQKLYPISKFLSQPSGFESI 24
           +R +VI+  KA+LS    K A L A RKER+ LPNYD     K + I +FLS PSG E+I
Sbjct: 26  RRIQVIKVHKANLSDSKQKKAYLFATRKERIGLPNYDVGSGGKTFHIREFLSDPSGVEAI 85

Query: 23  LNTKA 9
           LN KA
Sbjct: 86  LNAKA 90


>ref|XP_003549214.1| PREDICTED: uncharacterized protein LOC100813897 [Glycine max]
          Length = 244

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
 Frame = -1

Query: 164 LSKKNAKVANLIARRKERLNLPNYDDECQ-KLYPISKFLSQPSGFESILNTKA 9
           L+    K ANL A +KER+ LP Y+D+   K Y IS+FLSQPSG  ++LNTKA
Sbjct: 44  LNSNAKKKANLFAEKKERIRLPTYNDDLGGKKYHISEFLSQPSGIAAVLNTKA 96


>ref|XP_003539141.1| PREDICTED: uncharacterized protein LOC100803285 [Glycine max]
          Length = 211

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
 Frame = -1

Query: 164 LSKKNAKVANLIARRKERLNLPNYDDECQ-KLYPISKFLSQPSGFESILNTKA 9
           L+    K ANL A +KER+ LP Y+D+   K Y IS+FLSQPSG  ++LNTKA
Sbjct: 11  LNSNAKKKANLFAEKKERIRLPTYNDDLGGKKYHISEFLSQPSGIAAVLNTKA 63


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